Package ubic.gemma.persistence.service.genome.sequenceAnalysis

Class AnnotationAssociationDaoImpl

java.lang.Object

ubic.gemma.persistence.service.AbstractDao<AnnotationAssociation>

ubic.gemma.persistence.service.genome.sequenceAnalysis.AnnotationAssociationDaoImpl

All Implemented Interfaces:

BaseDao<AnnotationAssociation>, AnnotationAssociationDao

@Repository
public class AnnotationAssociationDaoImpl
extends AbstractDao<AnnotationAssociation>
implements AnnotationAssociationDao

Author:

paul

Field Summary

Fields inherited from class ubic.gemma.persistence.service.AbstractDao

log

Constructor Summary

Constructors

Constructor	Description
AnnotationAssociationDaoImpl(SessionFactory sessionFactory)

Method Summary

Modifier and Type	Method	Description
Collection<AnnotationAssociation>	find(Collection<GeneProduct> gps)
Collection<AnnotationAssociation>	find(BioSequence bioSequence)
Collection<AnnotationAssociation>	find(Gene gene)
void	thaw(Collection<AnnotationAssociation> anCollection)
void	thaw(AnnotationAssociation annotationAssociation)

Methods inherited from class ubic.gemma.persistence.service.AbstractDao

countAll, create, create, find, findByProperty, findByPropertyIn, findOneByProperty, findOrCreate, getBatchSize, getElementClass, getIdentifierPropertyName, getSessionFactory, load, load, loadAll, loadReference, loadReference, reload, reload, remove, remove, remove, save, save, streamAll, streamAll, streamQuery, update, update

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface ubic.gemma.persistence.service.BaseDao

countAll, create, create, find, findOrCreate, getElementClass, getIdentifierPropertyName, load, load, loadAll, loadReference, loadReference, reload, reload, remove, remove, remove, save, save, streamAll, streamAll, update, update

Constructor Details

AnnotationAssociationDaoImpl

@Autowired
public AnnotationAssociationDaoImpl(SessionFactory sessionFactory)

Method Details

find

public Collection<AnnotationAssociation> find(BioSequence bioSequence)

Specified by:

find in interface AnnotationAssociationDao

find

public Collection<AnnotationAssociation> find(Gene gene)

Specified by:

find in interface AnnotationAssociationDao

thaw

public void thaw(AnnotationAssociation annotationAssociation)

Specified by:

thaw in interface AnnotationAssociationDao

thaw

public void thaw(Collection<AnnotationAssociation> anCollection)

Specified by:

thaw in interface AnnotationAssociationDao

find

public Collection<AnnotationAssociation> find(Collection<GeneProduct> gps)

Specified by:

find in interface AnnotationAssociationDao