Package ubic.gemma.persistence.service.genome.sequenceAnalysis

Interface BlatAssociationDao

All Superinterfaces:

BaseDao<BlatAssociation>

All Known Implementing Classes:

BlatAssociationDaoImpl

public interface BlatAssociationDao
extends BaseDao<BlatAssociation>

See Also:

• BlatAssociation

Method Summary

Modifier and Type	Method	Description
Collection<BlatAssociation>	find(Collection<GeneProduct> toRemove)
Collection<BlatAssociation>	find(BioSequence bioSequence)
Collection<BlatAssociation>	find(Gene gene)
void	thaw(Collection<BlatAssociation> blatAssociations)
void	thaw(BlatAssociation blatAssociation)

Methods inherited from interface ubic.gemma.persistence.service.BaseDao

countAll, create, create, find, findOrCreate, getElementClass, load, load, loadAll, loadReference, loadReference, reload, reload, remove, remove, remove, save, save, streamAll, streamAll, update, update

Method Details

find

Collection<BlatAssociation> find(BioSequence bioSequence)

find

Collection<BlatAssociation> find(Gene gene)

thaw

void thaw(Collection<BlatAssociation> blatAssociations)

thaw

void thaw(BlatAssociation blatAssociation)

find

Collection<BlatAssociation> find(Collection<GeneProduct> toRemove)