Package ubic.gemma.persistence.service.genome.sequenceAnalysis

Class BlatAssociationDaoImpl

java.lang.Object

ubic.gemma.persistence.service.AbstractDao<BlatAssociation>

ubic.gemma.persistence.service.genome.sequenceAnalysis.BlatAssociationDaoImpl

All Implemented Interfaces:

BaseDao<BlatAssociation>, BlatAssociationDao

@Repository
public class BlatAssociationDaoImpl
extends AbstractDao<BlatAssociation>
implements BlatAssociationDao

Base Spring DAO Class: is able to create, update, remove, load, and find objects of type BlatAssociation.

See Also:

• BlatAssociation

Field Summary

Fields inherited from class ubic.gemma.persistence.service.AbstractDao

log

Constructor Summary

Constructors

Constructor	Description
BlatAssociationDaoImpl(SessionFactory sessionFactory)

Method Summary

Modifier and Type	Method	Description
Collection<BlatAssociation>	find(Collection<GeneProduct> gps)
Collection<BlatAssociation>	find(BioSequence bioSequence)
Collection<BlatAssociation>	find(Gene gene)
void	thaw(Collection<BlatAssociation> blatAssociations)
void	thaw(BlatAssociation blatAssociation)

Methods inherited from class ubic.gemma.persistence.service.AbstractDao

countAll, create, create, find, findByProperty, findByPropertyIn, findOneByProperty, findOrCreate, getBatchSize, getElementClass, getEntityName, getIdentifierPropertyName, getSessionFactory, load, load, loadAll, loadReference, loadReference, reload, reload, remove, remove, remove, save, save, streamAll, streamAll, streamQuery, update, update

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface ubic.gemma.persistence.service.BaseDao

countAll, create, create, find, findOrCreate, getElementClass, load, load, loadAll, loadReference, loadReference, reload, reload, remove, remove, remove, save, save, streamAll, streamAll, update, update

Constructor Details

BlatAssociationDaoImpl

@Autowired
public BlatAssociationDaoImpl(SessionFactory sessionFactory)

Method Details

find

public Collection<BlatAssociation> find(BioSequence bioSequence)

Specified by:

find in interface BlatAssociationDao

find

public Collection<BlatAssociation> find(Gene gene)

Specified by:

find in interface BlatAssociationDao

thaw

public void thaw(Collection<BlatAssociation> blatAssociations)

Specified by:

thaw in interface BlatAssociationDao

thaw

public void thaw(BlatAssociation blatAssociation)

Specified by:

thaw in interface BlatAssociationDao

find

public Collection<BlatAssociation> find(Collection<GeneProduct> gps)

Specified by:

find in interface BlatAssociationDao