Class HeatmapDataValueObject.GeneRef

java.lang.Object

ubic.gemma.rest.HeatmapDataValueObject.GeneRef

Enclosing class:

HeatmapDataValueObject

public static class HeatmapDataValueObject.GeneRef
extends Object

Compact gene reference: official symbol + full name + Gemma ID + NCBI gene ID. The Gemma ID is what the client uses to build a link to the gene page (e.g. /gene/{geneId}); the NCBI ID is what it uses to link out (e.g. NCBI Gene, or any external resource keyed by Entrez ID). Every field is individually optional — producers ship whatever they have.

Author:

claude

Constructor Summary

Constructors

Constructor	Description
GeneRef()
GeneRef(Long id, String officialSymbol, String name, Integer ncbiId)

Method Summary

Modifier and Type	Method	Description
Long	getId()
String	getName()	Full gene name, e.g.
Integer	getNcbiId()	NCBI (Entrez) gene ID.
String	getOfficialSymbol()
void	setId(Long id)
void	setName(String name)	Full gene name, e.g.
void	setNcbiId(Integer ncbiId)	NCBI (Entrez) gene ID.
void	setOfficialSymbol(String officialSymbol)

Methods inherited from class Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

GeneRef

public GeneRef()

GeneRef

public GeneRef(@Nullable
 Long id,
 @Nullable
 String officialSymbol,
 @Nullable
 String name,
 @Nullable
 Integer ncbiId)

Method Details

getId

@Nullable
public Long getId()

getOfficialSymbol

@Nullable
public String getOfficialSymbol()

getName

@Nullable
public String getName()

Full gene name, e.g. "breast cancer 1, early onset".

getNcbiId

@Nullable
public Integer getNcbiId()

NCBI (Entrez) gene ID. Null for the genes Gemma tracks without one.

setId

public void setId(@Nullable
 Long id)

setOfficialSymbol

public void setOfficialSymbol(@Nullable
 String officialSymbol)

setName

public void setName(@Nullable
 String name)

Full gene name, e.g. "breast cancer 1, early onset".

setNcbiId

public void setNcbiId(@Nullable
 Integer ncbiId)

NCBI (Entrez) gene ID. Null for the genes Gemma tracks without one.