Uses of Class
ubic.gemma.rest.util.args.AbstractEntityArg

Packages that use AbstractEntityArg

Package	Description
ubic.gemma.rest.util.args

Uses of AbstractEntityArg in ubic.gemma.rest.util.args

Subclasses of AbstractEntityArg in ubic.gemma.rest.util.args

Modifier and Type	Class	Description
class	CompositeSequenceArg<T>	Mutable argument type base class for Composite Sequence arguments.
class	CompositeSequenceIdArg	Composite Sequence argument for CS ID.
class	CompositeSequenceNameArg	Composite Sequence argument for CS name.
class	DatabaseEntryArg<T>	Mutable argument type base class for DatabaseEntry API.
class	DatabaseEntryIdArg	Long argument type for DatabaseEntry API, referencing the Taxon ID.
class	DatabaseEntryStringArg	String argument type for DatabaseEntry API, Can also be null.
class	DatasetArg<T>	Mutable argument type base class for dataset (ExpressionExperiment) API.
class	DatasetIdArg	Long argument type for dataset API, referencing the Dataset ID.
class	DatasetStringArg	String argument type for dataset API, referencing the Dataset short name.
class	ExpressionAnalysisResultSetArg	Represents an expression analysis result set identifier.
class	FactorValueArg<A>	Represents an API arguments that maps to a FactorValue by its ID or name.
class	FactorValueIdArg	Maps a long identifier to a FactorValue.
class	FactorValueValueArg	Deprecated.
class	GeneArg<T>	Mutable argument type base class for Gene API.
class	GeneEnsemblIdArg	Long argument type for Gene API, referencing the Gene Ensembl ID.
class	GeneNcbiIdArg	Long argument type for Gene API, referencing the Gene NCBI ID.
class	GeneSymbolArg	String argument type for Gene API.
class	PlatformArg<T>	Mutable argument type base class for dataset (ExpressionExperiment) API.
class	PlatformIdArg	Long argument type for platform API, referencing the platform ID.
class	PlatformStringArg	String argument type for platform API, referencing the Platform short name.
class	QuantitationTypeArg<T>
class	QuantitationTypeByIdArg
class	QuantitationTypeByNameArg
class	TaxonArg<T>	Mutable argument type base class for Taxon API
class	TaxonIdArg	Long argument type for taxon API, referencing the Taxon ID.
class	TaxonNameArg	String argument type for taxon API, referencing the Taxon scientific name or common name.
class	TaxonNcbiIdArg	Long argument type for taxon API, referencing the Taxon ID.

Methods in ubic.gemma.rest.util.args that return AbstractEntityArg

Modifier and Type	Method	Description
protected AbstractEntityArg<?,T,S>	AbstractEntityArgService.entityArgValueOf(Class<? extends AbstractEntityArg<?,T,S>> entityArgClass, String s)	Invoke either a static valueOf method or a suitable constructor to instantiate the argument.

Methods in ubic.gemma.rest.util.args with parameters of type AbstractEntityArg

Modifier and Type	Method	Description
protected T	AbstractEntityArgService.checkEntity(AbstractEntityArg<?,T,S> entityArg, T entity)	Checks whether the given object is null, and throws an appropriate exception if necessary.
List<T>	AbstractEntityArgService.getEntities(AbstractEntityArg<?,T,S> entityArg)
List<T>	EntityArgService.getEntities(AbstractEntityArg<?,T,S> entityArg)	Retrieve the entities represented by this argument.
T	AbstractEntityArgService.getEntity(AbstractEntityArg<?,T,S> entityArg)
T	EntityArgService.getEntity(AbstractEntityArg<?,T,S> entityArg)	Retrieve the entity represented by this argument.
Gene	GeneArgService.getEntity(AbstractEntityArg<?,Gene,GeneService> entityArg)	Retrieve the entity represented by this argument.
<A> Filters	AbstractEntityArgService.getFilters(AbstractEntityArg<A,T,S> entityArg)
<A> Filters	EntityArgService.getFilters(AbstractEntityArg<A,T,S> entityArg)	Translate the provided entity argument into a Filters.
<A> Filters	TaxonArgService.getFilters(AbstractEntityArg<A,Taxon,TaxonService> entityArg)

Method parameters in ubic.gemma.rest.util.args with type arguments of type AbstractEntityArg

Modifier and Type	Method	Description
protected AbstractEntityArg<?,T,S>	AbstractEntityArgService.entityArgValueOf(Class<? extends AbstractEntityArg<?,T,S>> entityArgClass, String s)	Invoke either a static valueOf method or a suitable constructor to instantiate the argument.

Constructor parameters in ubic.gemma.rest.util.args with type arguments of type AbstractEntityArg

Modifier	Constructor	Description
protected	AbstractEntityArrayArg(Class<? extends AbstractEntityArg> entityArgClass, List<String> values)