ResponseDataObject<Set<GeneEvidenceValueObject>> |
TaxaWebService.findCandidateGenesInTaxon(TaxonArg<?> taxonArg,
StringArrayArg phenotypes,
Boolean editableOnly) |
Deprecated.
|
ResponseDataObject<List<PhysicalLocationValueObject>> |
TaxaWebService.getGeneLocationsInTaxon(TaxonArg<?> taxonArg,
GeneArg<?> geneArg) |
Retrieves gene location for the gene on the given taxon.
|
ResponseDataObject<List<GeneEvidenceValueObject>> |
TaxaWebService.getGenesEvidenceInTaxon(TaxonArg<?> taxonArg,
GeneArg<?> geneArg) |
Deprecated.
|
FilteredAndPaginatedResponseDataObject<ExpressionExperimentValueObject> |
TaxaWebService.getTaxonDatasets(TaxonArg<?> taxonArg,
FilterArg<ExpressionExperiment> filter,
OffsetArg offset,
LimitArg limit,
SortArg<Taxon> sort) |
Retrieves datasets for the given taxon.
|
ResponseDataObject<List<GeneValueObject>> |
TaxaWebService.getTaxonGenes(TaxonArg<?> taxonArg,
GeneArg<?> geneArg) |
Retrieves genes matching the identifier on the given taxon.
|
ResponseDataObject<List<GeneValueObject>> |
TaxaWebService.getTaxonGenesOverlappingChromosome(TaxonArg<?> taxonArg,
String chromosomeName,
String strand,
Long start,
Integer size) |
Finds genes overlapping a given region.
|
ResponseDataObject<Collection<?>> |
TaxaWebService.getTaxonPhenotypes(TaxonArg<?> taxonArg,
Boolean editableOnly,
Boolean tree) |
Loads all phenotypes for the given taxon.
|
SearchWebService.SearchResultsResponseDataObject |
SearchWebService.search(QueryArg query,
TaxonArg<?> taxonArg,
PlatformArg<?> platformArg,
List<String> resultTypes,
LimitArg limit,
ExcludeArg<SearchResult<?>> excludeArg) |
Search everything subject to taxon and platform constraints.
|
QueriedAndFilteredAndPaginatedResponseDataObject<ExpressionExperimentValueObject> |
AnnotationsWebService.searchTaxonDatasets(TaxonArg<?> taxonArg,
StringArrayArg query,
FilterArg<ExpressionExperiment> filter,
OffsetArg offset,
LimitArg limit,
SortArg<ExpressionExperiment> sort) |
|
QueriedAndFilteredAndPaginatedResponseDataObject<ExpressionExperimentValueObject> |
AnnotationsWebService.searchTaxonDatasetsByQueryInPath(TaxonArg<?> taxonArg,
StringArrayArg query,
FilterArg<ExpressionExperiment> filter,
OffsetArg offset,
LimitArg limit,
SortArg<ExpressionExperiment> sort) |
|