Class ExpressionDataSVDTest

java.lang.Object
ubic.gemma.core.util.test.BaseTest5
ubic.gemma.core.analysis.preprocess.ExpressionDataSVDTest

@ContextConfiguration public class ExpressionDataSVDTest extends BaseTest5
Author:
paul
  • Constructor Details

    • ExpressionDataSVDTest

      public ExpressionDataSVDTest()
  • Method Details

    • setUp

      @BeforeEach public void setUp() throws Exception
      Throws:
      Exception
    • testGetS

      @Test public void testGetS()
    • testGetU

      @Test public void testGetU()
    • testMatrixReconstruct

      @Test public void testMatrixReconstruct()
    • testEigenvalues

      @Test public void testEigenvalues() throws SVDException
      Throws:
      SVDException
    • testVarianceFractions

      @Test public void testVarianceFractions()
    • testMatrixReconstructB

      @Test @Tag("slow") public void testMatrixReconstructB() throws Exception
      Throws:
      Exception
    • testUMatrixAsExpressionData

      @Test public void testUMatrixAsExpressionData() throws SVDException
      Throws:
      SVDException
    • testUMatrixAsExpressionDataUnnormalized

      @Test public void testUMatrixAsExpressionDataUnnormalized()
    • testWinnow

      @Test public void testWinnow()