Package ubic.gemma.core.analysis.preprocess

Class ExpressionDataSVDTest

java.lang.Object
org.springframework.test.context.junit4.AbstractJUnit4SpringContextTests
ubic.gemma.core.util.test.BaseTest
ubic.gemma.core.analysis.preprocess.ExpressionDataSVDTest
All Implemented Interfaces:
org.springframework.beans.factory.Aware, org.springframework.context.ApplicationContextAware
@ContextConfiguration public class ExpressionDataSVDTest extends BaseTest
Author:
paul

  • Constructor Details

    • ExpressionDataSVDTest

      public ExpressionDataSVDTest()

  • Method Details

    • setUp

      public void setUp() throws Exception
      Throws:
      Exception

    • testGetS

      public void testGetS()

    • testGetU

      public void testGetU()

    • testMatrixReconstruct

      public void testMatrixReconstruct()

    • testEigenvalues

      public void testEigenvalues() throws SVDException
      Throws:
      SVDException

    • testVarianceFractions

      public void testVarianceFractions()

    • testMatrixReconstructB

      public void testMatrixReconstructB() throws Exception
      Throws:
      Exception

    • testUMatrixAsExpressionData

      public void testUMatrixAsExpressionData() throws SVDException
      Throws:
      SVDException

    • testUMatrixAsExpressionDataUnnormalized

      public void testUMatrixAsExpressionDataUnnormalized()

    • testWinnow

      public void testWinnow()