Class ExpressionDataSVDTest

java.lang.Object
ubic.gemma.core.util.test.BaseTest5
ubic.gemma.core.analysis.preprocess.ExpressionDataSVDTest
@ContextConfiguration public class ExpressionDataSVDTest extends BaseTest5
Author:
paul

  • Constructor Details

    • ExpressionDataSVDTest

      public ExpressionDataSVDTest()

  • Method Details

    • setUp

      @BeforeEach public void setUp() throws Exception
      Throws:
      Exception

    • testGetS

      @Test public void testGetS()

    • testGetU

      @Test public void testGetU()

    • testMatrixReconstruct

      @Test public void testMatrixReconstruct()

    • testEigenvalues

      @Test public void testEigenvalues() throws SVDException
      Throws:
      SVDException

    • testVarianceFractions

      @Test public void testVarianceFractions()

    • testMatrixReconstructB

      @Test @Tag("slow") public void testMatrixReconstructB() throws Exception
      Throws:
      Exception

    • testUMatrixAsExpressionData

      @Test public void testUMatrixAsExpressionData() throws SVDException
      Throws:
      SVDException

    • testUMatrixAsExpressionDataUnnormalized

      @Test public void testUMatrixAsExpressionDataUnnormalized()

    • testWinnow

      @Test public void testWinnow()