Class ProbeMapperTest

java.lang.Object
ubic.gemma.core.analysis.sequence.ProbeMapperTest
@Tag("goldenpath") public class ProbeMapperTest extends Object
Unaware of the Gemma database but uses the hg19 and mm10 databases (tests will not work with hg38)
Author:
pavlidis

  • Constructor Details

    • ProbeMapperTest

      public ProbeMapperTest()

  • Method Details

    • setUp

      @BeforeAll public static void setUp() throws Exception
      Throws:
      Exception

    • tearDown

      @AfterAll public static void tearDown()

    • testComputeSpecificityA

      @Test public void testComputeSpecificityA()

    • testComputeSpecificityB

      @Test public void testComputeSpecificityB()

    • testComputeSpecificityC

      @Test public void testComputeSpecificityC()

    • testComputeSpecificityD

      @Test public void testComputeSpecificityD()

    • testLocateGene

      @Test public void testLocateGene()

    • testLocateGeneOnWrongStrand

      @Test public void testLocateGeneOnWrongStrand()

    • testProcessBlatResults

      @Test @Disabled public void testProcessBlatResults()

    • testIntronIssues

      @Test public void testIntronIssues()