Class ExpressionDataDoubleMatrixTest

java.lang.Object
ubic.gemma.core.datastructure.matrix.ExpressionDataDoubleMatrixTest
public class ExpressionDataDoubleMatrixTest extends Object

  • Constructor Details

    • ExpressionDataDoubleMatrixTest

      public ExpressionDataDoubleMatrixTest()

  • Method Details

    • testSliceRows

      @Test public void testSliceRows()

    • testSliceColumnsRefusesASampleTheMatrixDoesNotHold

      @Test public void testSliceColumnsRefusesASampleTheMatrixDoesNotHold()
      A sample the matrix does not hold must be refused by name. getColumnIndex answers -1 for one, and that -1 used to be written into the index array and only surface further down as "Index -1 out of bounds for length N" while reading a row -- naming neither the sample nor the fact that it was missing. GSE46209 hit it with 21 subset assays against a 19-column matrix.

    • testSliceColumns

      @Test public void testSliceColumns()

    • testNumberOfCells

      @Test public void testNumberOfCells()

    • testSlicingWhenNumberOfCellsIsNull

      @Test public void testSlicingWhenNumberOfCellsIsNull()

    • testSlicingWhenNumberOfCellsIsPartiallyPopulated

      @Test public void testSlicingWhenNumberOfCellsIsPartiallyPopulated()