Package ubic.gemma.core.loader.expression.singleCell

Class SingleCellDataTransformationsTest

java.lang.Object

org.springframework.test.context.junit4.AbstractJUnit4SpringContextTests

ubic.gemma.core.util.test.BaseTest

ubic.gemma.core.loader.expression.singleCell.SingleCellDataTransformationsTest

All Implemented Interfaces:

org.springframework.beans.factory.Aware, org.springframework.context.ApplicationContextAware

@ContextConfiguration
public class SingleCellDataTransformationsTest
extends BaseTest

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	SingleCellDataTransformationsTest.Config

Field Summary

Fields

Modifier and Type	Field	Description
org.springframework.context.ApplicationContext	ctx

Fields inherited from class org.springframework.test.context.junit4.AbstractJUnit4SpringContextTests

applicationContext, logger

Constructor Summary

Constructors

Constructor	Description
SingleCellDataTransformationsTest()

Method Summary

Modifier and Type	Method	Description
void	testPack()
void	testPipeline()
void	testRewrite()
void	testSample()
void	testSortBySample()
void	testTranspose()
void	testUnraw()

Methods inherited from class org.springframework.test.context.junit4.AbstractJUnit4SpringContextTests

setApplicationContext

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Details

ctx

@Autowired
public org.springframework.context.ApplicationContext ctx

Constructor Details

SingleCellDataTransformationsTest

public SingleCellDataTransformationsTest()

Method Details

testTranspose

public void testTranspose()
                   throws IOException

Throws:

IOException

testPack

public void testPack()
              throws IOException

Throws:

IOException

testSortBySample

public void testSortBySample()
                      throws IOException

Throws:

IOException

testSample

public void testSample()
                throws IOException

Throws:

IOException

testRewrite

public void testRewrite()
                 throws IOException

Throws:

IOException

testUnraw

public void testUnraw()
               throws IOException

Throws:

IOException

testPipeline

public void testPipeline()
                  throws IOException

Throws:

IOException