Class ExpressionAnalysisResultSetServiceTest

java.lang.Object

ubic.gemma.core.util.test.BaseTest5

ubic.gemma.core.util.test.BaseIntegrationTest5

ubic.gemma.core.util.test.BaseSpringContextTest5

ubic.gemma.persistence.service.analysis.expression.diff.ExpressionAnalysisResultSetServiceTest

public class ExpressionAnalysisResultSetServiceTest
extends BaseSpringContextTest5

This implementation is using the Hibernate Criteria API, so we want to minimally test the logic of translating Filters and Sort into proper org.hibernate.Criteria queries. (That type was removed in Hibernate 6; the name is kept here because it is what the code being described used to build.)

Author:

poirigui

Field Summary

Fields inherited from class BaseSpringContextTest5

arrayDesignPersister, externalDatabaseService, log, persisterHelper, taxonService, testHelper

Constructor Summary

Constructors

Constructor	Description
ExpressionAnalysisResultSetServiceTest()

Method Summary

Modifier and Type	Method	Description
void	testFilterableProperties()
void	testFilterBySize()	There's a few quirks for the Criteria API when it comes to treating size.
void	testFilterVosByNumberOfCharacteristics()
void	testFilterVosByNumberOfResults()
void	testLoadValueObjects()
void	testLoadValueObjectsWithPagination()

Methods inherited from class BaseSpringContextTest5

addTestAnalyses, countRowsInTable, deleteFromTables, getJdbcTemplate, getNewTestPersistentCompleteExpressionExperiment, getTaxon, getTestNonPersistentBioSequence, getTestPersistentArrayDesign, getTestPersistentArrayDesign, getTestPersistentArrayDesign, getTestPersistentBasicExpressionExperiment, getTestPersistentBasicExpressionExperiment, getTestPersistentBibliographicReference, getTestPersistentBioAssay, getTestPersistentBioAssay, getTestPersistentBioMaterial, getTestPersistentBioMaterial, getTestPersistentBioSequence, getTestPersistentBioSequence, getTestPersistentBioSequence2GeneProducts, getTestPersistentBlatResult, getTestPersistentBlatResult, getTestPersistentCompleteExpressionExperiment, getTestPersistentCompleteExpressionExperimentWithSequences, getTestPersistentCompleteExpressionExperimentWithSequences, getTestPersistentContact, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentExpressionExperiment, getTestPersistentExpressionExperiment, getTestPersistentGene, getTestPersistentGene, getTestPersistentGeneProduct, getTestPersistentQuantitationType, randomName, resetTestCollectionSize, runAsAdmin, runAsAgent, runAsAnonymous, runAsUser, runAsUser, setTestCollectionSize

Methods inherited from class BaseIntegrationTest5

setUpAuthentication, tearDownSecurityContext

Methods inherited from class Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

ExpressionAnalysisResultSetServiceTest

public ExpressionAnalysisResultSetServiceTest()

Method Details

testLoadValueObjects

@Test
public void testLoadValueObjects()

testLoadValueObjectsWithPagination

@Test
public void testLoadValueObjectsWithPagination()

testFilterVosByNumberOfResults

@Test
public void testFilterVosByNumberOfResults()

testFilterVosByNumberOfCharacteristics

@Test
@Disabled("See https://github.com/PavlidisLab/Gemma/issues/518")
public void testFilterVosByNumberOfCharacteristics()

testFilterBySize

@Test
public void testFilterBySize()

There's a few quirks for the Criteria API when it comes to treating size.

testFilterableProperties

@Test
public void testFilterableProperties()