Class CompositeSequenceArgTest

java.lang.Object
ubic.gemma.rest.util.args.CompositeSequenceArgTest
public class CompositeSequenceArgTest extends Object

  • Constructor Details

    • CompositeSequenceArgTest

      public CompositeSequenceArgTest()

  • Method Details

    • testValueOfNumericDispatchesToIdArg

      @Test public void testValueOfNumericDispatchesToIdArg()

    • testValueOfStringDispatchesToNameArg

      @Test public void testValueOfStringDispatchesToNameArg()

    • testValueOfEmptyRaises

      @Test public void testValueOfEmptyRaises()

    • testValueOfBlankRaises

      @Test public void testValueOfBlankRaises()

    • numericNameIsFoundWhenTheIdBelongsToAnotherPlatform

      @Test public void numericNameIsFoundWhenTheIdBelongsToAnotherPlatform()
      A probe NAME can be entirely numeric -- Agilent feature-number arrays name every probe with a bare integer -- and the numeric branch of CompositeSequenceArg.valueOf(String) reads it as an id. Verified on gemma2: the probe named "22575" on GPL890 has id 209787, so the id lookup lands on an unrelated probe on another platform. The name lookup has to take over.

    • numericNameIsFoundWhenNoSuchIdExistsAtAll

      @Test public void numericNameIsFoundWhenNoSuchIdExistsAtAll()

    • idOnTheRequestedPlatformWinsWithoutANameLookup

      @Test public void idOnTheRequestedPlatformWinsWithoutANameLookup()
      The id keeps precedence, and costs no extra query: a numeric argument that resolves to a probe on the requested platform must not also trigger a name lookup.

    • idOnAnotherPlatformWithNoNameMatchStillRaises

      @Test public void idOnAnotherPlatformWithNoNameMatchStillRaises()
      The pre-existing 400 is preserved where it was actually right: the id names a real probe on another platform and nothing on this platform carries that name.

    • neitherIdNorNameYieldsNull

      @Test public void neitherIdNorNameYieldsNull()
      Neither an id nor a name match yields null, which the arg service turns into a 404.

    • nameFallbackPreservesLeadingZeroes

      @Test public void nameFallbackPreservesLeadingZeroes()
      The fallback looks up the spelling as written, not a re-rendering of the parsed long -- a probe named "007" is not a probe named "7".