List of all 21,870 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Palermo, A T et al. (2012) Transcriptional response to GAA deficiency (Pompe disease) in infantile-onset patients.; Mol Genet Metab, 106: 287-300 |
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GSE38680 |
| Palii, Carmen G et al. (2011) Differential genomic targeting of the transcription factor TAL1 in alternate haematopoietic lineages.; EMBO J, 30: 494-509 |
|
GSE20545 GSE20544 |
| Palii, Carmen G et al. (2014) Trichostatin A enhances vascular repair by injected human endothelial progenitors through increasing the expression of TAL1-dependent genes.; Cell Stem Cell, 14: 644-57 |
|
GSE44444 |
| Palladino, Steven P et al. (2017) The Human Blood-Nerve Barrier Transcriptome.; Sci Rep, 7: 17477 |
|
GSE107574 |
| Pallocca, Giorgia et al. (2017) Impairment of human neural crest cell migration by prolonged exposure to interferon-beta.; Arch Toxicol, 91: 3385-3402 |
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GSE94521 |
| Palma, Pablo et al. (2013) Microarray profiling of mononuclear peripheral blood cells identifies novel candidate genes related to chemoradiation response in rectal cancer.; PLoS One, 8: e74034 |
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GSE44172 |
| Palmer, Abraham A et al. (2005) Gene expression differences in mice divergently selected for methamphetamine sensitivity.; Mamm Genome, 16: 291-305 |
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GSE12387 |
| Palmer, Roger D et al. (2008) Pediatric malignant germ cell tumors show characteristic transcriptome profiles.; Cancer Res, 68: 4239-47 |
|
GSE10615 |
| Palmi, Chiara et al. (2023) Definition and Prognostic Value of Ph-like and IKZF1plus Status in Children With Down Syndrome and B-cell Precursor Acute Lymphoblastic Leukemia.; Hemasphere, 7: e892 |
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GSE200864 |
| Palmieri, Ilaria et al. (2022) Differential Neuropathology, Genetics, and Transcriptomics in Two Kindred Cases with Alzheimer's Disease and Lewy Body Dementia.; Biomedicines, 10: [no pages] |
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GSE193438 |
| Palmisano, Ilaria et al. (2019) Epigenomic signatures underpin the axonal regenerative ability of dorsal root ganglia sensory neurons.; Nat Neurosci, 22: 1913-1924 |
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GSE132382 |
| Palmisano, Ilaria et al. (2024) Three-dimensional chromatin mapping of sensory neurons reveals that promoter-enhancer looping is required for axonal regeneration.; Proc Natl Acad Sci U S A, 121: e2402518121 |
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GSE249687 |
| Palmos, Alish B et al. (2021) Lithium treatment and human hippocampal neurogenesis.; Transl Psychiatry, 11: 555 |
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GSE184930 |
| Palmqvist, Lars et al. (2007) Candidate genes for expansion and transformation of hematopoietic stem cells by NUP98-HOX fusion genes.; PLoS One, 2: e768 |
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GSE9079 |
| Palomero, Jara et al. (2014) SOX11 promotes tumor angiogenesis through transcriptional regulation of PDGFA in mantle cell lymphoma.; Blood, 124: 2235-47 |
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GSE34763 |
| Palomero, Teresa et al. (2007) Mutational loss of PTEN induces resistance to NOTCH1 inhibition in T-cell leukemia.; Nat Med, 13: 1203-10 |
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GSE5716 GSE5682 |
| Palomino-Alonso, Maialen et al. (2017) Network-Driven Proteogenomics Unveils an Aging-Related Imbalance in the Olfactory I?B?-NF?B p65 Complex Functionality in Tg2576 Alzheimer's Disease Mouse Model.; Int J Mol Sci, 18: [no pages] |
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GSE103835 |
| Palomo-Irigoyen, Marta et al. (2020) HuR/ELAVL1 drives malignant peripheral nerve sheath tumor growth and metastasis.; J Clin Invest, 130: 3848-3864 |
|
GSE120685 |
| Palumaa, Teele et al. (2024) Meta-analysis of retinal transcriptome profiling studies in animal models of myopia.; Front Med (Lausanne), 11: 1479891 |
|
GSE284642 |
| Pamies, D et al. (2014) Silencing of PNPLA6, the neuropathy target esterase (NTE) codifying gene, alters neurodifferentiation of human embryonal carcinoma stem cells (NT2).; Neuroscience, 281: 54-67 |
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GSE55761 |
| Pan, Bo et al. (2023) The SIK1/CRTC2/CREB1 and TWIST1/PI3K/Akt/GSK3β signaling pathways mediated by microRNA-25-3p are altered in the schizophrenic rat brain.; Front Cell Neurosci, 17: 1087335 |
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GSE220510 |
| Pan, Christopher C et al. (2023) Antagonizing the irreversible thrombomodulin-initiated proteolytic signaling alleviates age-related liver fibrosis via senescent cell killing.; Cell Res, 33: 516-532 |
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GSE228941 |
| Pan, Feng et al. (2010) Impact of female cigarette smoking on circulating B cells in vivo: the suppressed ICOSLG, TCF3, and VCAM1 gene functional network may inhibit normal cell function.; Immunogenetics, 62: 237-51 |
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GSE18723 |
| Pan, Gang et al. (2021) Multifaceted regulation of hepatic lipid metabolism by YY1.; Life Sci Alliance, 4: [no pages] |
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GSE158884 |
| Pan, Hui et al. (2024) Pathogenic role of acyl coenzyme A binding protein (ACBP) in Cushing's syndrome.; Nat Metab, 6: 2281-2299 |
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GSE248672 |
| Pan, Jie et al. (2020) Transcriptomic profiling of microglia and astrocytes throughout aging.; J Neuroinflammation, 17: 97 |
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GSE137028 |
| Pan, Jin-Xiu et al. (2021) Osteoblastic Swedish mutant APP expedites brain deficits by inducing endoplasmic reticulum stress-driven senescence.; Commun Biol, 4: 1326 |
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GSE186827 |
| Pan, Jonathan Z et al. (2006) Rat brain DNA transcript profile of halothane and isoflurane exposure.; Pharmacogenet Genomics, 16: 171-82 |
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GSE6433 GSE2982 |
| Pan, Jonathan Z et al. (2024) ATF3 is a neuron-specific biomarker for spinal cord injury and ischaemic stroke.; Clin Transl Med, 14: e1650 |
|
GSE180767 |
| Pan, Jun-Ping et al. (2026) Reduced ULK1 links impaired autophagy and mitophagy to Alzheimer's disease pathology.; Nat Aging, 6: 1079-1102 |
|
GSE263411 |
| Pan, Leiling et al. (2023) RBPJ Deficiency Sensitizes Pancreatic Acinar Cells to KRAS-Mediated Pancreatic Intraepithelial Neoplasia Initiation.; Cell Mol Gastroenterol Hepatol, 16: 783-807 |
|
GSE189756 |
| Pan, Lin et al. (2023) Oligodendrocyte-lineage cell exocytosis and L-type prostaglandin D synthase promote oligodendrocyte development and myelination.; Elife, 12: [no pages] |
|
GSE168569 |
| Pan, Lingyu et al. (2024) Analysis of global gene expression using RNA-sequencing reveals novel mechanism of Yanghe Pingchuan decoction in the treatment of asthma.; BMC Pulm Med, 24: 137 |
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GSE247032 |
| Pan, Mingyu et al. (2024) CSNK1A1/CK1α suppresses autoimmunity by restraining the CGAS-STING1 signaling.; Autophagy, 20: 311-328 |
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GSE226593 |
| Pan, Qun et al. (2008) Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing.; Nat Genet, 40: 1413-5 |
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GSE13652 |
| Pan, Richard et al. (2025) Editing DNA methylation in vivo.; Nat Commun, 17: 527 |
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GSE280072 |
| Pan, Ruangang et al. (2020) Oligodendrocytes that survive acute coronavirus infection induce prolonged inflammatory responses in the CNS.; Proc Natl Acad Sci U S A, 117: 15902-15910 |
|
GSE148650 |
| Pan, Shao-Hui et al. (2021) Conversion of mouse embryonic fibroblasts into neural crest cells and functional corneal endothelia by defined small molecules.; Sci Adv, 7: [no pages] |
|
GSE162889 |
| Pan, Tianying et al. (2021) Autism-Like Behavior in the Offspring ofCYP11A1-Overexpressing Pregnant Rats.; Front Neurosci, 15: 774439 |
|
GSE185805 |
| Pan, Warren et al. (2019) Transcriptional and physiological roles for STAT proteins in leptin action.; Mol Metab, 22: 121-131 |
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GSE123983 |
| Pan, Xingxiu et al. (2023) A genetically encoded tool to increase cellular NADH/NAD+ratio in living cells.; Nat Chem Biol, [no vol.]: [no pages] |
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GSE232115 |
| Pan, Yanchun et al. (2018) The role of Twist1 in mutant huntingtin-induced transcriptional alterations and neurotoxicity.; J Biol Chem, 293: 11850-11866 |
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GSE115523 GSE115522 |
| Pan, Yao-Jie et al. (2022) Alternative splicing of HSPA12A pre-RNA by SRSF11 contributes to metastasis potential of colorectal cancer.; Clin Transl Med, 12: e1113 |
|
GSE199094 |
| Pan, Yijun et al. (2023) Peripheral Administration of the Kv1.3-Blocking Peptide HsTX1[R14A] Improves Cognitive Performance in Senescence Accelerated SAMP8 Mice.; Neurotherapeutics, [no vol.]: [no pages] |
|
GSE221352 |
| Pan, Yongbo et al. (2024) m6A modification enhances the stability ofCDC25Apromotes tumorigenicity of esophagogastric junction adenocarcinoma via cell cycle.; Int J Biol Sci, 20: 4209-4221 |
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GSE261202 |
| Pan, Yongcheng et al. (2023) Expression of expanded GGC repeats within NOTCH2NLC causes cardiac dysfunction in mouse models.; Cell Biosci, 13: 157 |
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GSE241464 |
| Pan, Yu-Hang et al. (2025) Pre-rRNA spatial distribution and functional organization of the nucleolus.; Nature, 646: 227-235 |
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GSE301874 |
| Pan, Yuqiong et al. (2011) A new FACS approach isolates hESC derived endoderm using transcription factors.; PLoS One, 6: e17536 |
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GSE24135 |
| Pan, Yushuang et al. (2023) Characterization of pain-related behaviors and gene expression profiling of peripheral sensory ganglia in a mouse model of acute ankle sprain.; Front Behav Neurosci, 17: 1189489 |
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GSE230178 |
| Pan, Zhaolong et al. (2023) Pancreatic acinar cell fate relies on system xC-to prevent ferroptosis during stress.; Cell Death Dis, 14: 536 |
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GSE240106 |
| Panayotis, Nicolas et al. (2018) Importin ?5 Regulates Anxiety through MeCP2 and Sphingosine Kinase 1.; Cell Rep, 25: 3169-3179.e7 |
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GSE106546 |
| Panayotis, Nicolas et al. (2021) β-sitosterol reduces anxiety and synergizes with established anxiolytic drugs in mice.; Cell Rep Med, 2: 100281 |
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GSE134467 GSE134460 |
| Panchal, Rekha G et al. (2009) Reduced levels of protein tyrosine phosphatase CD45 protect mice from the lethal effects of Ebola virus infection.; Cell Host Microbe, 6: 162-73 |
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GSE17509 |
| Pancholi, Sunil et al. (2020) Tumour kinome re-wiring governs resistance to palbociclib in oestrogen receptor positive breast cancers, highlighting new therapeutic modalities.; Oncogene, 39: 4781-4797 |
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GSE98987 |
| Panciera, Tito et al. (2016) Induction of Expandable Tissue-Specific Stem/Progenitor Cells through Transient Expression of YAP/TAZ.; Cell Stem Cell, 19: 725-737 |
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GSE70173 GSE70164 GSE70171 |
| Pande, Manjusha et al. (2011) Transcriptional profiling of diabetic neuropathy in the BKS db/db mouse: a model of type 2 diabetes.; Diabetes, 60: 1981-9 |
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GSE34889 |
| Pandey, Radha Raman et al. (2020) The Mammalian Cap-Specific m6Am RNA Methyltransferase PCIF1 Regulates Transcript Levels in Mouse Tissues.; Cell Rep, 32: 108038 |
|
GSE151229 |
| Pandey, Surya et al. (2020) A whole-tissue RNA-seq toolkit for organism-wide studies of gene expression with PME-seq.; Nat Protoc, 15: 1459-1483 |
|
GSE138103 |
| Pandiloski, Ninoslav et al. (2024) DNA methylation governs the sensitivity of repeats to restriction by the HUSH-MORC2 corepressor.; Nat Commun, 15: 7534 |
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GSE240386 GSE224747.2 |
| Pandya, Hetal et al. (2017) Differentiation of human and murine induced pluripotent stem cells to microglia-like cells.; Nat Neurosci, 20: 753-759 |
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GSE47605 GSE78115 |
| Pang, Baoxu et al. (2013) Drug-induced histone eviction from open chromatin contributes to the chemotherapeutic effects of doxorubicin.; Nat Commun, 4: 1908 |
|
GSE33626 |
| Pang, Junxiong et al. (2016) Discovery and Validation of Prognostic Biomarker Models to Guide Triage among Adult Dengue Patients at Early Infection.; PLoS One, 11: e0155993 |
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GSE28988 |
| Pang, Swee Heng Milon et al. (2018) PU.1 Is Required for the Developmental Progression of Multipotent Progenitors to Common Lymphoid Progenitors.; Front Immunol, 9: 1264 |
|
GSE89642 |
| Pang, Wei et al. (2024) Generation of human region-specific brain organoids with medullary spinal trigeminal nuclei.; Cell Stem Cell, 31: 1501-1512.e8 |
|
GSE251678 |
| Pang, Wendy W et al. (2011) Human bone marrow hematopoietic stem cells are increased in frequency and myeloid-biased with age.; Proc Natl Acad Sci U S A, 108: 20012-7 |
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GSE32719 |
| Panganiban, Clarisse H et al. (2018) Noise-induced dysregulation ofQuakingRNA binding proteins contributes to auditory nerve demyelination and hearing loss.; J Neurosci, [no vol.]: [no pages] |
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GSE100365 |
| Panganiban, Clarisse H et al. (2022) Two distinct types of nodes of Ranvier support auditory nerve function in the mouse cochlea.; Glia, 70: 768-791 |
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GSE141865 |
| Panman, Lia et al. (2011) Transcription factor-induced lineage selection of stem-cell-derived neural progenitor cells.; Cell Stem Cell, 8: 663-75 |
|
GSE27655 |
| Pannia, Emanuela et al. (2020) [6S]-5-Methyltetrahydrofolic Acid and Folic Acid Pregnancy Diets Differentially Program Metabolic Phenotype and Hypothalamic Gene Expression of Wistar Rat Dams Post-Birth.; Nutrients, 13: [no pages] |
|
GSE161954 |
| Pannérec, Alice et al. (2016) A robust neuromuscular system protects rat and human skeletal muscle from sarcopenia.; Aging (Albany NY), 8: 712-29 |
|
GSE77022 |
| Pantaleo, M A et al. (2008) Gene expression profiling of liver metastases from colorectal cancer as potential basis for treatment choice.; Br J Cancer, 99: 1729-34 |
|
GSE10961 |
| Pantazatos, S P et al. (2017) Whole-transcriptome brain expression and exon-usage profiling in major depression and suicide: evidence for altered glial, endothelial and ATPase activity.; Mol Psychiatry, 22: 760-773 |
|
GSE101521.2 |
| Pantel, Austin et al. (2014) Direct type I IFN but not MDA5/TLR3 activation of dendritic cells is required for maturation and metabolic shift to glycolysis after poly IC stimulation.; PLoS Biol, 12: e1001759 |
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GSE46478 |
| Panzeri, Valentina et al. (2023) CDK12/13 promote splicing of proximal introns by enhancing the interaction between RNA polymerase II and the splicing factor SF3B1.; Nucleic Acids Res, 51: 5512-5526 |
|
GSE222493 |
| Pao, Ping-Chieh et al. (2020) HDAC1 modulates OGG1-initiated oxidative DNA damage repair in the aging brain and Alzheimer's disease.; Nat Commun, 11: 2484 |
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GSE147407 GSE115437 |
| Pao, Ping-Chieh et al. (2023) A Cdk5-derived peptide inhibits Cdk5/p25 activity and improves neurodegenerative phenotypes.; Proc Natl Acad Sci U S A, 120: e2217864120 |
|
GSE222327 |
| Paoloni, Melissa et al. (2009) Canine tumor cross-species genomics uncovers targets linked to osteosarcoma progression.; BMC Genomics, 10: 625 |
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GSE16088 GSE16091 |
| Paoluzzi, Luca et al. (2016) BET and BRAF inhibitors act synergistically against BRAF-mutant melanoma.; Cancer Med, 5: 1183-93 |
|
GSE83592 |
| Paoni, Nicholas F et al. (2003) Transcriptional profiling of the transition from normal intestinal epithelia to adenomas and carcinomas in the APCMin/+ mouse.; Physiol Genomics, 15: 228-35 |
|
GSE422 |
| Papachristou, Evangelia K et al. (2018) A quantitative mass spectrometry-based approach to monitor the dynamics of endogenous chromatin-associated protein complexes.; Nat Commun, 9: 2311 |
|
GSE104872 |
| Papadaki, Olympia et al. (2009) Control of thymic T cell maturation, deletion and egress by the RNA-binding protein HuR.; J Immunol, 182: 6779-88 |
|
GSE9174 |
| Papadimitriou, Christos et al. (2018) 3D Culture Method for Alzheimer's Disease Modeling Reveals Interleukin-4 Rescues Aβ42-Induced Loss of Human Neural Stem Cell Plasticity.; Dev Cell, 46: 85-101.e8 |
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GSE108038 GSE78117 |
| Papadopoulou, Thaleia et al. (2016) Dual role of Med12 in PRC1-dependent gene repression and ncRNA-mediated transcriptional activation.; Cell Cycle, 15: 1479-93 |
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GSE73352 |
| Papaemmanuil, Elli et al. (2016) Genomic Classification and Prognosis in Acute Myeloid Leukemia.; N Engl J Med, 374: 2209-2221 |
|
GSE70124 |
| Papale, Ligia A et al. (2022) Gene by environment interaction mouse model reveals a functional role for 5-hydroxymethylcytosine in neurodevelopmental disorders.; Genome Res, 32: 266-279 |
|
GSE87032 |
| Papapanou, Panos N et al. (2007) Periodontal therapy alters gene expression of peripheral blood monocytes.; J Clin Periodontol, 34: 736-47 |
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GSE6751 |
| Papapanou, Panos N et al. (2009) Subgingival bacterial colonization profiles correlate with gingival tissue gene expression.; BMC Microbiol, 9: 221 |
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GSE16134 |
| Pällmann, Nora et al. (2019) Regulation of the unfolded protein response through ATF4 and FAM129A in prostate cancer.; Oncogene, 38: 6301-6318 |
|
GSE125826 |