List of all 20,298 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Rahib, Lola et al. (2007) Glycerol kinase deficiency alters expression of genes involved in lipid metabolism, carbohydrate metabolism, and insulin signaling.; Eur J Hum Genet, 15: 646-57 |
|
GSE4656 |
| Rahimian, Reza et al. (2024) Targeting SRSF3 restores immune mRNA translation in microglia/macrophages following cerebral ischemia.; Mol Ther, 32: 783-799 |
|
GSE232244 |
| Rahimov, Fedik et al. (2011) Gene expression profiling of skeletal muscles treated with a soluble activin type IIB receptor.; Physiol Genomics, 43: 398-407 |
|
GSE25306 |
| Rahimov, Fedik et al. (2012) Transcriptional profiling in facioscapulohumeral muscular dystrophy to identify candidate biomarkers.; Proc Natl Acad Sci U S A, [no vol.]: [no pages] |
|
GSE36398 |
| Rahman, M Jubayer et al. (2016) Despite Increased Type 1 IFN, Autoimmune Nonobese Diabetic Mice Display Impaired Dendritic Cell Response to CpG and Decreased Nuclear Localization of IFN-Activated STAT1.; J Immunol, 196: 2031-40 |
|
GSE75883 |
| Rahman, Md Taibur et al. (2021) The Redox Homeostasis of Skeletal Muscle Cells Regulates Stage Differentiation ofToxoplasma gondii.; Front Cell Infect Microbiol, 11: 798549 |
|
GSE133952 |
| Rahmati Nezhad, Pegah et al. (2021) Complement factor I upregulates expression of matrix metalloproteinase-13 and -2 and promotes invasion of cutaneous squamous carcinoma cells.; Exp Dermatol, [no vol.]: [no pages] |
|
GSE166421 |
| Rahme, Gilbert J et al. (2016) PDGF Engages an E2F-USP1 Signaling Pathway to Support ID2-Mediated Survival of Proneural Glioma Cells.; Cancer Res, 76: 2964-76 |
|
GSE77419 GSE77423 |
| Rahme, Gilbert J et al. (2018) A recombinant lentiviral PDGF-driven mouse model of proneural glioblastoma.; Neuro Oncol, 20: 332-342 |
|
GSE99361 |
| Rai, Mamta et al. (2021) Proteasome stress in skeletal muscle mounts a long-range protective response that delays retinal and brain aging.; Cell Metab, 33: 1137-1154.e9 |
|
GSE149797 |
| Rai, Myriam et al. (2008) HDAC inhibitors correct frataxin deficiency in a Friedreich ataxia mouse model.; PLoS One, 3: e1958 |
|
GSE10745 |
| Raia, Valentina et al. (2011) Dynamic mathematical modeling of IL13-induced signaling in Hodgkin and primary mediastinal B-cell lymphoma allows prediction of therapeutic targets.; Cancer Res, 71: 693-704 |
|
GSE23591 |
| Raine, Tim et al. (2015) Generation of primary human intestinal T cell transcriptomes reveals differential expression at genetic risk loci for immune-mediated disease.; Gut, 64: 250-9 |
|
GSE49877 |
| Rainer, J et al. (2009) Glucocorticoid-regulated microRNAs and mirtrons in acute lymphoblastic leukemia.; Leukemia, 23: 746-52 |
|
GSE11336 |
| Raines, Anna M et al. (2013) Recombineering-based dissection of flanking and paralogous Hox gene functions in mouse reproductive tracts.; Development, 140: 2942-52 |
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GSE42339 GSE41993 |
| Raitano, Susanna et al. (2015) Restoration of progranulin expression rescues cortical neuron generation in an induced pluripotent stem cell model of frontotemporal dementia.; Stem Cell Reports, 4: 16-24 |
|
GSE60902 |
| Raj, Bushra et al. (2014) A global regulatory mechanism for activating an exon network required for neurogenesis.; Mol Cell, 56: 90-103 |
|
GSE57278.2 |
| Raj, Nisha et al. (2021) Cell-type-specific profiling of human cellular models of fragile X syndrome reveal PI3K-dependent defects in translation and neurogenesis.; Cell Rep, 35: 108991 |
|
GSE146339 |
| Raja, Erna et al. (2022) The extracellular matrix fibulin 7 maintains epidermal stem cell heterogeneity during skin aging.; EMBO Rep, 23: e55478 |
|
GSE185087 |
| Raja, Reesha et al. (2024) Insertion of a neomycin selection cassette in the Amigo1 locus alters gene expression in the olfactory epithelium leading to region-specific defects in olfactory receptor neuron development.; Genesis, 62: e23594 |
|
GSE249314 |
| Rajagopalan, Adhithi et al. (2023) A gain-of-function p53 mutant synergizes with oncogenic NRAS to promote acute myeloid leukemia in mice.; J Clin Invest, 133: [no pages] |
|
GSE243642 |
| Rajagopalan, Sumati et al. (2012) Cellular senescence induced by CD158d reprograms natural killer cells to promote vascular remodeling.; Proc Natl Acad Sci U S A, 109: 20596-601 |
|
GSE35330 |
| Rajala, Ammaji et al. (2024) Age-related retinal degeneration resulting from the deletion of Shp2 tyrosine phosphatase in photoreceptor neurons.; Cell Death Dis, 15: 577 |
|
GSE269514 |
| Rajamani, Uthra et al. (2018) Super-Obese Patient-Derived iPSC Hypothalamic Neurons Exhibit Obesogenic Signatures and Hormone Responses.; Cell Stem Cell, 22: 698-712.e9 |
|
GSE95243 |
| Rajan, Prabhakar et al. (2014) Identification of a candidate prognostic gene signature by transcriptome analysis of matched pre- and post-treatment prostatic biopsies from patients with advanced prostate cancer.; BMC Cancer, 14: 977 |
|
GSE51005 |
| Rajan, Prabhakar et al. (2014) Next-generation sequencing of advanced prostate cancer treated with androgen-deprivation therapy.; Eur Urol, 66: 32-9 |
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GSE48403 |
| Rajan, Saravanan et al. (2012) Analysis of early C2C12 myogenesis identifies stably and differentially expressed transcriptional regulators whose knock-down inhibits myoblast differentiation.; Physiol Genomics, 44: 183-97 |
|
GSE16992 |
| Rajan, Sudarsan et al. (2013) Microarray analysis of active cardiac remodeling genes in a familial hypertrophic cardiomyopathy mouse model rescued by a phospholamban knockout.; Physiol Genomics, 45: 764-73 |
|
GSE42892 |
| Rajaram, Megha et al. (2013) System-wide analysis reveals a complex network of tumor-fibroblast interactions involved in tumorigenicity.; PLoS Genet, 9: e1003789 |
|
GSE41678 |
| Rajasekaran, Santhanasabapathy et al. (2024) Transcriptomic analysis of melanoma cells reveals an association of α-synuclein with regulation of the inflammatory response.; Sci Rep, 14: 27140 |
|
GSE253046 |
| Rajderkar, Sudha et al. (2023) Topologically associating domain boundaries are required for normal genome function.; Commun Biol, 6: 435 |
|
GSE172089 |
| Raje, Noopur et al. (2008) Clinical, radiographic, and biochemical characterization of multiple myeloma patients with osteonecrosis of the jaw.; Clin Cancer Res, 14: 2387-95 |
|
GSE7116 |
| Rajebhosale, Prithviraj et al. (2024) Neuregulin1 Nuclear Signaling Influences Adult Neurogenesis and Regulates a Schizophrenia Susceptibility Gene Network within the Mouse Dentate Gyrus.; J Neurosci, 44: [no pages] |
|
GSE268856 |
| Rajendiran, Vignesh et al. (2024) Base editing of key residues in the BCL11A-XL-specific zinc finger domains derepresses fetal globin expression.; Mol Ther, 32: 663-677 |
|
GSE229989 |
| Rajendren, Suba et al. (2023) The cellular and KSHV A-to-I RNA editome in primary effusion lymphoma and its role in the viral lifecycle.; Nat Commun, 14: 1367 |
|
GSE212350 |
| Rajesh, Yetirajam et al. (2022) Dissecting the Balance Between Metabolic and Oncogenic Functions of Astrocyte-Elevated Gene-1/Metadherin.; Hepatol Commun, 6: 561-575 |
|
GSE156849 |
| Rajkumar, Anto P et al. (2020) Reduced Brd1 expression leads to reversible depression-like behaviors and gene-expression changes in female mice.; Transl Psychiatry, 10: 239 |
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GSE150431 GSE150264 GSE150028 |
| Rajkumar, Revathi et al. (2010) Genomewide RNA expression profiling in lung identifies distinct signatures in idiopathic pulmonary arterial hypertension and secondary pulmonary hypertension.; Am J Physiol Heart Circ Physiol, 298: H1235-48 |
|
GSE15197 |
| Rajman, Marek et al. (2017) A microRNA-129-5p/Rbfox crosstalk coordinates homeostatic downscaling of excitatory synapses.; EMBO J, 36: 1770-1787 |
|
GSE81437 |
| Raju, Chandrasekhar S et al. (2018) Secretagogin is Expressed by Developing Neocortical GABAergic Neurons in Humans but not Mice and Increases Neurite Arbor Size and Complexity.; Cereb Cortex, 28: 1946-1958 |
|
GSE95639 |
| Rakhshandehroo, Maryam et al. (2007) Comprehensive analysis of PPARalpha-dependent regulation of hepatic lipid metabolism by expression profiling.; PPAR Res, 2007: 26839 |
|
GSE8316.3 |
| Rakhshandehroo, Maryam et al. (2009) Comparative analysis of gene regulation by the transcription factor PPARalpha between mouse and human.; PLoS One, 4: e6796 |
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GSE17254.2 GSE17254.1 |
| Ralston, Amy et al. (2010) Gata3 regulates trophoblast development downstream of Tead4 and in parallel to Cdx2.; Development, 137: 395-403 |
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GSE12985 GSE12986 |
| Ramagopalan, Sreeram V et al. (2010) A ChIP-seq defined genome-wide map of vitamin D receptor binding: associations with disease and evolution.; Genome Res, 20: 1352-60 |
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GSE22174 GSE22172 |
| Ramaker, Ryne C et al. (2017) Post-mortem molecular profiling of three psychiatric disorders.; Genome Med, 9: 72 |
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GSE80655 |
| Ramakrishnan, Swathi et al. (2024) Race-specific coregulatory and transcriptomic profiles associated with DNA methylation and androgen receptor in prostate cancer.; Genome Med, 16: 52 |
|
GSE237995 |
| Ramamurthy, Narayan et al. (2016) Impact of IL-27 on hepatocyte antiviral gene expression and function.; Wellcome Open Res, 1: 17 |
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GSE89610 |
| Raman, Ayush T et al. (2018) Apparent bias toward long gene misregulation in MeCP2 syndromes disappears after controlling for baseline variations.; Nat Commun, 9: 3225 |
|
GSE105045 |
| Raman, Rohini et al. (2015) Gene expression signatures in motor neurone disease fibroblasts reveal dysregulation of metabolism, hypoxia-response and RNA processing functions.; Neuropathol Appl Neurobiol, 41: 201-26 |
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GSE56808 |
| Raman, Tina et al. (2009) Quality control in microarray assessment of gene expression in human airway epithelium.; BMC Genomics, 10: 493 |
|
GSE11906 |
| Ramani, Biswarathan et al. (2017) Comparison of spinocerebellar ataxia type 3 mouse models identifies early gain-of-function, cell-autonomous transcriptional changes in oligodendrocytes.; Hum Mol Genet, 26: 3362-3374 |
|
GSE117605 |
| Ramani, Manimaran et al. (2018) Supraphysiological Levels of Oxygen Exposure During the Neonatal Period Impairs Signaling Pathways Required for Learning and Memory.; Sci Rep, 8: 9914 |
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GSE111189 |
| Ramaswamy, S et al. (2001) Multiclass cancer diagnosis using tumor gene expression signatures.; Proc Natl Acad Sci U S A, 98: 15149-54 |
|
ramaswamy-cancer |
| Rambousek, Lukas et al. (2020) Aberrant expression of PAR bZIP transcription factors is associated with epileptogenesis, focus on hepatic leukemia factor.; Sci Rep, 10: 3760 |
|
GSE140046 |
| Rambout, Xavier et al. (2016) The transcription factor ERG recruits CCR4-NOT to control mRNA decay and mitotic progression.; Nat Struct Mol Biol, 23: 663-72 |
|
GSE80395 |
| Ramesh, Raghu et al. (2022) JUN Regulation of Injury-Induced Enhancers in Schwann Cells.; J Neurosci, 42: 6506-6517 |
|
GSE209658 |
| Ramesh, Vidya et al. (2016) Loss of Uhrf1 in neural stem cells leads to activation of retroviral elements and delayed neurodegeneration.; Genes Dev, 30: 2199-2212 |
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GSE84548 GSE84547 GSE84550 |
| Ramesh, Vijyendra et al. (2023) Bidirectional regulation of postmitotic H3K27me3 distributions underlie cerebellar granule neuron maturation dynamics.; Elife, 12: [no pages] |
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GSE230712 GSE218685 |
| Ramirez, Kevin et al. (2012) Gene deregulation and chronic activation in natural killer cells deficient in the transcription factor ETS1.; Immunity, 36: 921-32 |
|
GSE37301 |
| Ramirez, Paulino et al. (2022) Pathogenic tau accelerates aging-associated activation of transposable elements in the mouse central nervous system.; Prog Neurobiol, 208: 102181 |
|
GSE186140 GSE186228 |
| Ramirez, Ricardo N et al. (2017) Dynamic Gene Regulatory Networks of Human Myeloid Differentiation.; Cell Syst, 4: 416-429.e3 |
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GSE87055 |
| Ramnarine, Varune Rohan et al. (2018) The long noncoding RNA landscape of neuroendocrine prostate cancer and its clinical implications.; Gigascience, 7: [no pages] |
|
GSE59986.2 |
| Ramonet, David et al. (2025) Stabilizing the retromer complex rescues synaptic dysfunction and endosomal trafficking deficits in an Alzheimer's disease mouse model.; Acta Neuropathol Commun, 13: 190 |
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GSE267989 |
| Ramos Pittol, Jose Miguel et al. (2020) FXR Isoforms Control Different Metabolic Functions in Liver Cells via Binding to Specific DNA Motifs.; Gastroenterology, 159: 1853-1865.e10 |
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GSE133659 |
| Ramos, Alexander D et al. (2013) Integration of genome-wide approaches identifies lncRNAs of adult neural stem cells and their progeny in vivo.; Cell Stem Cell, 12: 616-28 |
|
GSE45280 |
| Ramos, Alexander D et al. (2015) The long noncoding RNA Pnky regulates neuronal differentiation of embryonic and postnatal neural stem cells.; Cell Stem Cell, 16: 439-447 |
|
GSE65542 |
| Ramos, Azucena et al. (2023) Leukemia-intrinsic determinants of CAR-T response revealed by iterative in vivo genome-wide CRISPR screening.; Nat Commun, 14: 8048 |
|
GSE196135 |
| Ramos, Carlos A et al. (2006) Evidence for diversity in transcriptional profiles of single hematopoietic stem cells.; PLoS Genet, 2: e159 |
|
GSE2534 |
| Ramos, Hugo et al. (2022) Transcriptomic Analysis Reveals That Retinal Neuromodulation Is a Relevant Mechanism in the Neuroprotective Effect of Sitagliptin in an Experimental Model of Diabetic Retinopathy.; Int J Mol Sci, 24: [no pages] |
|
GSE219084 |
| Ramos, Raul et al. (2025) Superstable lipid vacuoles endow cartilage with its shape and biomechanics.; Science, 387: eads9960 |
|
GSE275825 |
| Ramos, Susana I et al. (2022) An atlas of late prenatal human neurodevelopment resolved by single-nucleus transcriptomics.; Nat Commun, 13: 7671 |
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GSE217511.1 GSE217511.2 |
| Ramos, Yolande F M et al. (2013) Genes expressed in blood link osteoarthritis with apoptotic pathways.; Ann Rheum Dis, [no vol.]: [no pages] |
|
GSE48556 |
| Ramos-Campoy, Oscar et al. (2022) Differential Gene Expression in Sporadic and Genetic Forms of Alzheimer's Disease and Frontotemporal Dementia in Brain Tissue and Lymphoblastoid Cell Lines.; Mol Neurobiol, 59: 6411-6428 |
|
GSE195872 |
| Ramos-Cejudo, Jaime et al. (2012) Spatial and temporal gene expression differences in core and periinfarct areas in experimental stroke: a microarray analysis.; PLoS One, 7: e52121 |
|
GSE36010 |
| Rampazzo, Elena et al. (2022) Histone Deacetylase Inhibitors Impair Glioblastoma Cell Motility and Proliferation.; Cancers (Basel), 14: [no pages] |
|
GSE191126 |
| Rampersaud, Evadnie et al. (2013) Genomic signatures of a global fitness index in a multi-ethnic cohort of women.; Ann Hum Genet, 77: 147-57 |
|
GSE34788 |
| Rampil, Ira J et al. (2006) Isoflurane modulates genomic expression in rat amygdala.; Anesth Analg, 102: 1431-8 |
|
GSE1779 |
| Rampioni Vinciguerra, Gian Luca et al. (2024) Nutrient restriction-activated Fra-2 promotes tumor progression via IGF1R in miR-15a downmodulated pancreatic ductal adenocarcinoma.; Signal Transduct Target Ther, 9: 31 |
|
GSE237163 GSE237164 |
| Rampon, Christine et al. (2008) Protocadherin 12 deficiency alters morphogenesis and transcriptional profile of the placenta.; Physiol Genomics, 34: 193-204 |
|
GSE7676 |
| Ramsden, Helen L et al. (2015) Laminar and dorsoventral molecular organization of the medial entorhinal cortex revealed by large-scale anatomical analysis of gene expression.; PLoS Comput Biol, 11: e1004032 |
|
GSE63300 |
| Ramsey, Jon E et al. (2013) The zinc finger transcription factor ZXDC activates CCL2 gene expression by opposing BCL6-mediated repression.; Mol Immunol, 56: 768-80 |
|
GSE45417 |
| Ramsey, Kathryn A et al. (2013) In utero exposure to arsenic alters lung development and genes related to immune and mucociliary function in mice.; Environ Health Perspect, 121: 244-50 |
|
GSE37831 |
| Ramshekar, Aniket et al. (2022) RNA-Seq Provides Insights into VEGF-Induced Signaling in Human Retinal Microvascular Endothelial Cells: Implications in Retinopathy of Prematurity.; Int J Mol Sci, 23: [no pages] |
|
GSE221861 GSE221860 |
| Ramsingh, Arlene I et al. (2015) Transcriptional dysregulation of inflammatory/immune pathways after active vaccination against Huntington's disease.; Hum Mol Genet, 24: 6186-97 |
|
GSE71816 |
| Ramírez, Sara et al. (2017) Mitochondrial Dynamics Mediated by Mitofusin 1 Is Required for POMC Neuron Glucose-Sensing and Insulin Release Control.; Cell Metab, 25: 1390-1399.e6 |
|
GSE81993 |
| Ran, Leili et al. (2015) Combined inhibition of MAP kinase and KIT signaling synergistically destabilizes ETV1 and suppresses GIST tumor growth.; Cancer Discov, 5: 304-15 |
|
GSE64608 |