List of all 21,870 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Papapetrou, Eirini P et al. (2011) Genomic safe harbors permit high ?-globin transgene expression in thalassemia induced pluripotent stem cells.; Nat Biotechnol, 29: 73-8 |
|
GSE24901 |
| Paparone, S et al. (2015) Transcriptional landscapes at the intersection of neuronal apoptosis and substance P-induced survival: exploring pathways and drug targets.; Cell Death Discov, 2: 16050 |
|
GSE67788 |
| Papazoglou, Ioannis et al. (2022) A distinct hypothalamus-to-β cell circuit modulates insulin secretion.; Cell Metab, 34: 285-298.e7 |
|
GSE188856 |
| Papes, Fabio et al. (2022) Transcription Factor 4 loss-of-function is associated with deficits in progenitor proliferation and cortical neuron content.; Nat Commun, 13: 2387 |
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GSE189121 GSE159392 GSE159859 |
| Papin, Antonin et al. (2019) CSF1R and BTK inhibitions as novel strategies to disrupt the dialog between mantle cell lymphoma and macrophages.; Leukemia, 33: 2442-2453 |
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GSE124931 |
| Papizan, James B et al. (2011) Nkx2.2 repressor complex regulates islet β-cell specification and prevents β-to-α-cell reprogramming.; Genes Dev, 25: 2291-305 |
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GSE155229 |
| Papp, Bernadett et al. (2019) Genome-Wide Identification of Direct RTA Targets Reveals Key Host Factors for Kaposi's Sarcoma-Associated Herpesvirus Lytic Reactivation.; J Virol, 93: [no pages] |
|
GSE123898 |
| Pappalardi, Melissa B et al. (2021) Discovery of a first-in-class reversible DNMT1-selective inhibitor with improved tolerability and efficacy in acute myeloid leukemia.; Nat Cancer, 2: 1002-1017 |
|
GSE134742 |
| Pappano, William N et al. (2009) Reversal of oncogene transformation and suppression of tumor growth by the novel IGF1R kinase inhibitor A-928605.; BMC Cancer, 9: 314 |
|
GSE14024 |
| Pappas, Athina et al. (2015) Transcriptomics of maternal and fetal membranes can discriminate between gestational-age matched preterm neonates with and without cognitive impairment diagnosed at 18-24 months.; PLoS One, 10: e0118573 |
|
GSE61822 |
| Pappas, D J et al. (2012) Transcriptional expression patterns triggered by chemically distinct neuroprotective molecules.; Neuroscience, 226: 10-20 |
|
GSE38701 |
| Paquette, Martin A et al. (2011) Thyroid hormone-regulated gene expression in juvenile mouse liver: identification of thyroid response elements using microarray profiling and in silico analyses.; BMC Genomics, 12: 634 |
|
GSE21307 |
| Paquette, Stéphane G et al. (2012) Interleukin-6 is a potential biomarker for severe pandemic H1N1 influenza A infection.; PLoS One, 7: e38214 |
|
GSE31022 |
| Paradowska, Agnieszka S et al. (2012) Genome wide identification of promoter binding sites for H4K12ac in human sperm and its relevance for early embryonic development.; Epigenetics, 7: 1057-70 |
|
GSE29002 |
| Parakalan, Rangarajan et al. (2012) Transcriptome analysis of amoeboid and ramified microglia isolated from the corpus callosum of rat brain.; BMC Neurosci, 13: 64 |
|
GSE29885 |
| Parapuram, Sunil K et al. (2010) Distinct signature of altered homeostasis in aging rod photoreceptors: implications for retinal diseases.; PLoS One, 5: e13885 |
|
GSE22317 |
| Parchem, Ronald J et al. (2014) Two miRNA clusters reveal alternative paths in late-stage reprogramming.; Cell Stem Cell, 14: 617-31 |
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GSE54341 |
| Parchem, Ronald J et al. (2015) miR-302 Is Required for Timing of Neural Differentiation, Neural Tube Closure, and Embryonic Viability.; Cell Rep, 12: 760-73 |
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GSE62396 |
| Pardanani, A et al. (2013) Safety and efficacy of CYT387, a JAK1 and JAK2 inhibitor, in myelofibrosis.; Leukemia, 27: 1322-7 |
|
GSE40841 |
| Pardo, Joaquín et al. (2018) IGF-I Gene Therapy in Aging Rats Modulates Hippocampal Genes Relevant to Memory Function.; J Gerontol A Biol Sci Med Sci, 73: 459-467 |
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GSE100021 |
| Pardo, Luba M et al. (2013) Regional differences in gene expression and promoter usage in aged human brains.; Neurobiol Aging, 34: 1825-36 |
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GSE43472 |
| Pardo, Marta et al. (2017) Intranasal siRNA administration reveals IGF2 deficiency contributes to impaired cognition in Fragile X syndrome mice.; JCI Insight, 2: e91782 |
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GSE83217.1 |
| Paredes, João A et al. (2013) Gene expression deregulation in postnatal skeletal muscle of TK2 deficient mice reveals a lower pool of proliferating myogenic progenitor cells.; PLoS One, 8: e53698 |
|
GSE38449 |
| Parent, Anne-Simone et al. (2008) Gene expression profiling of hypothalamic hamartomas: a search for genes associated with central precocious puberty.; Horm Res, 69: 114-23 |
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GSE7142 |
| Parente, Michael K et al. (2012) Dysregulation of gene expression in a lysosomal storage disease varies between brain regions implicating unexpected mechanisms of neuropathology.; PLoS One, 7: e32419 |
|
GSE34071 |
| Parente, Michael K et al. (2016) Integrated analysis of proteome and transcriptome changes in the mucopolysaccharidosis type VII mouse hippocampus.; Mol Genet Metab, 118: 41-54 |
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GSE76283 |
| Parhizkar, Samira et al. (2023) Sleep deprivation exacerbates microglial reactivity and Aβ deposition in aTREM2-dependent manner in mice.; Sci Transl Med, 15: eade6285 |
|
GSE225360 |
| Parichha, Arpan et al. (2022) Constitutive activation of canonical Wnt signaling disrupts choroid plexus epithelial fate.; Nat Commun, 13: 633 |
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GSE162784 |
| Parikh, Hemang et al. (2007) TXNIP regulates peripheral glucose metabolism in humans.; PLoS Med, 4: e158 |
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GSE7146.1 GSE7146.2 |
| Parikshak, Neelroop N et al. (2016) Genome-wide changes in lncRNA, splicing, and regional gene expression patterns in autism.; Nature, 540: 423-427 |
|
GSE89057 |
| Parisian, Alison D et al. (2020) SMARCB1 loss interacts with neuronal differentiation state to block maturation and impact cell stability.; Genes Dev, 34: 1316-1329 |
|
GSE157012.2 |
| Parisian, Alison D et al. (2024) Palazestrant (OP-1250), A Complete Estrogen Receptor Antagonist, Inhibits Wild-type and Mutant ER-positive Breast Cancer Models as Monotherapy and in Combination.; Mol Cancer Ther, 23: 285-300 |
|
GSE241942 GSE241943 |
| Parisien, Marc et al. (2017) Effect of Human Genetic Variability on Gene Expression in Dorsal Root Ganglia and Association with Pain Phenotypes.; Cell Rep, 19: 1940-1952 |
|
GSE78148 |
| Parisien, Marc et al. (2019) Genetic pathway analysis reveals a major role for extracellular matrix organization in inflammatory and neuropathic pain.; Pain, 160: 932-944 |
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GSE111216 |
| Parisotto, Maxime et al. (2022) The NAMPT Inhibitor FK866 Increases Metformin Sensitivity in Pancreatic Cancer Cells.; Cancers (Basel), 14: [no pages] |
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GSE210562 |
| Park, Ae Kyung et al. (2012) Prognostic classification of pediatric medulloblastoma based on chromosome 17p loss, expression of MYCC and MYCN, and Wnt pathway activation.; Neuro Oncol, 14: 203-14 |
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GSE30074 |
| Park, Cana et al. (2023) Platelet factors are induced by longevity factor klotho and enhance cognition in young and aging mice.; Nat Aging, 3: 1067-1078 |
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GSE171929 |
| Park, Cheol Gyu et al. (2022) Cytoplasmic LMO2-LDB1 Complex Activates STAT3 Signaling through Interaction with gp130-JAK in Glioma Stem Cells.; Cells, 11: [no pages] |
|
GSE182670 |
| Park, Christopher C et al. (2011) Gene networks associated with conditional fear in mice identified using a systems genetics approach.; BMC Syst Biol, 5: 43 |
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GSE26500 |
| Park, Dae Hwi et al. (2014) Activation of neuronal gene expression by the JMJD3 demethylase is required for postnatal and adult brain neurogenesis.; Cell Rep, 8: 1290-9 |
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GSE59888 |
| Park, Dong Shin et al. (2023) iPS-cell-derived microglia promote brain organoid maturation via cholesterol transfer.; Nature, 623: 397-405 |
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GSE241127 |
| Park, Eun Sung et al. (2011) Cross-species hybridization of microarrays for studying tumor transcriptome of brain metastasis.; Proc Natl Acad Sci U S A, 108: 17456-61 |
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GSE19179.2 GSE19179.1 |
| Park, Gaeun et al. (2023) Dysregulation of the Wnt/β-catenin signaling pathway via Rnf146 upregulation in a VPA-induced mouse model of autism spectrum disorder.; Exp Mol Med, 55: 1783-1794 |
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GSE215871 |
| Park, Goonho et al. (2023) Neurodegeneration risk factor, EIF2AK3 (PERK), influences tau protein aggregation.; J Biol Chem, 299: 102821 |
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GSE217525 |
| Park, Gun-Hoo et al. (2020) Activated microglia cause metabolic disruptions in developmental cortical interneurons that persist in interneurons from individuals with schizophrenia.; Nat Neurosci, 23: 1352-1364 |
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GSE152438 GSE132689 |
| Park, Hongryeol et al. (2024) Apelin modulates inflammation and leukocyte recruitment in experimental autoimmune encephalomyelitis.; Nat Commun, 15: 6282 |
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GSE230549 |
| Park, Hye-Jin et al. (2022) ACTL6a coordinates axonal caliber recognition and myelination in the peripheral nerve.; iScience, 25: 104132 |
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GSE179340 |
| Park, James M et al. (2021) Migratory cortical interneuron-specific transcriptome abnormalities in schizophrenia.; J Psychiatr Res, 137: 111-116 |
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GSE155067 |
| Park, Ji-Seon et al. (2023) Amphiregulin normalizes altered circuit connectivity for social dominance of the CRTC3 knockout mouse.; Mol Psychiatry, [no vol.]: [no pages] |
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GSE222741 |
| Park, Joo-Seop et al. (2012) Six2 and Wnt regulate self-renewal and commitment of nephron progenitors through shared gene regulatory networks.; Dev Cell, 23: 637-51 |
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GSE39583 |
| Park, Jun Young et al. (2016) The apical complex protein Pals1 is required to maintain cerebellar progenitor cells in a proliferative state.; Development, 143: 133-46 |
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GSE75696 |
| Park, Jung-Hoon et al. (2011) Identification of DNA methylation changes associated with human gastric cancer.; BMC Med Genomics, 4: 82 |
|
GSE33651 |
| Park, Jung-Jun et al. (2006) GRB14, GPD1, and GDF8 as potential network collaborators in weight loss-induced improvements in insulin action in human skeletal muscle.; Physiol Genomics, 27: 114-21 |
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GSE474 |
| Park, Junseong et al. (2024) Comparison of Glioblastoma Cell Culture Platforms Based on Transcriptional Similarity with Paired Tissue.; Pharmaceuticals (Basel), 17: [no pages] |
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GSE249289 |
| Park, Mi Ae et al. (2018) Activation of the Arterial Program Drives Development of Definitive Hemogenic Endothelium with Lymphoid Potential.; Cell Rep, 23: 2467-2481 |
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GSE96815 |
| Park, Nicole I et al. (2017) ASCL1 Reorganizes Chromatin to Direct Neuronal Fate and Suppress Tumorigenicity of Glioblastoma Stem Cells.; Cell Stem Cell, 21: 209-224.e7 |
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GSE87615 GSE87617 |
| Park, Sanghyun et al. (2021) Trophoblast glycoprotein is a new candidate gene for Parkinson's disease.; NPJ Parkinsons Dis, 7: 110 |
|
GSE178400 |
| Park, Seong-Min et al. (2013) A known expressed sequence tag, BM742401, is a potent lincRNA inhibiting cancer metastasis.; Exp Mol Med, 45: e31 |
|
GSE41476 |
| Park, Soon Sang et al. (2025) High p16INK4Aexpression in glioblastoma is associated with senescence phenotype and better prognosis.; Neoplasia, 60: 101116 |
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GSE266210 |
| Park, Su Jung et al. (2025) Tetrahydrobenzimidazole TMQ0153 targets OPA1 and restores drug sensitivity in AML via ROS-induced mitochondrial metabolic reprogramming.; J Exp Clin Cancer Res, 44: 114 |
|
GSE292091 |
| Park, Suhyeon et al. (2025) Inhibition of serotonin-Htr2b signaling in skeletal muscle mitigates obesity-induced insulin resistance.; Exp Mol Med, 57: 1177-1188 |
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GSE279210 GSE275857 |
| Park, Sung Wook et al. (2017) Dry age-related macular degeneration like pathology in aged 5XFAD mice: Ultrastructure and microarray analysis.; Oncotarget, 8: 40006-40018 |
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GSE85408 |
| Park, Sung-Woo et al. (2009) The protein disulfide isomerase AGR2 is essential for production of intestinal mucus.; Proc Natl Acad Sci U S A, 106: 6950-5 |
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GSE12503 |
| Park, Tea Soon et al. (2020) Vascular progenitors generated from tankyrase inhibitor-regulated naïve diabetic human iPSC potentiate efficient revascularization of ischemic retina.; Nat Commun, 11: 1195 |
|
GSE141639 |
| Park, Walter D et al. (2007) A meta-analysis of kidney microarray datasets: investigation of cytokine gene detection and correlation with rt-PCR and detection thresholds.; BMC Genomics, 8: 88 |
|
GSE7392 |
| Park, Walter D et al. (2010) Fibrosis with inflammation at one year predicts transplant functional decline.; J Am Soc Nephrol, 21: 1987-97 |
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GSE22459 |
| Park, Won Ung et al. (2021) A Novel Vitronectin Peptide Facilitates Differentiation of Oligodendrocytes from Human Pluripotent Stem Cells (Synthetic ECM for Oligodendrocyte Differentiation).; Biology (Basel), 10: [no pages] |
|
GSE173826 |
| Park, Yong H et al. (2019) Transcriptomic profiles of retinal ganglion cells are defined by the magnitude of intraocular pressure elevation in adult mice.; Sci Rep, 9: 2594 |
|
GSE122205 |
| Parker, Gretchen E et al. (2006) Gene expression profiling of mice with genetically modified muscle glycogen content.; Biochem J, 395: 137-45 |
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GSE2198 |
| Parker, Matthew W et al. (2014) Fibrotic extracellular matrix activates a profibrotic positive feedback loop.; J Clin Invest, 124: 1622-35 |
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GSE45686 |
| Parker, Scott et al. (2023) Immunotoxin-αCD40 therapy activates innate and adaptive immunity and generates a durable antitumor response in glioblastoma models.; Sci Transl Med, 15: eabn5649 |
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GSE221376 |
| Parkitna, Jan Rodriguez et al. (2010) Loss of the serum response factor in the dopamine system leads to hyperactivity.; FASEB J, 24: 2427-35 |
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GSE10870 |
| Parman, Toufan et al. (2011) Toxicogenomics and metabolomics of pentamethylchromanol (PMCol)-induced hepatotoxicity.; Toxicol Sci, 124: 487-501 |
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GSE29673 |
| Parnell, Euan et al. (2023) Excitatory Dysfunction Drives Network and Calcium Handling Deficits in 16p11.2 Duplication Schizophrenia Induced Pluripotent Stem Cell-Derived Neurons.; Biol Psychiatry, 94: 153-163 |
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GSE215183 |
| Parnell, Grant et al. (2011) Aberrant cell cycle and apoptotic changes characterise severe influenza A infection--a meta-analysis of genomic signatures in circulating leukocytes.; PLoS One, 6: e17186 |
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GSE20346 |
| Parnell, Grant P et al. (2012) A distinct influenza infection signature in the blood transcriptome of patients with severe community-acquired pneumonia.; Crit Care, 16: R157 |
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GSE40012 |
| Parnell, Grant P et al. (2013) Identifying key regulatory genes in the whole blood of septic patients to monitor underlying immune dysfunctions.; Shock, 40: 166-74 |
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GSE54514 |
| Parra Bravo, Celeste et al. (2024) Human iPSC 4R tauopathy model uncovers modifiers of tau propagation.; Cell, 187: 2446-2464.e22 |
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GSE255902 |
| Parras, Alberto et al. (2018) Autism-like phenotype and risk gene mRNA deadenylation by CPEB4 mis-splicing.; Nature, 560: 441-446 |
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GSE113840 GSE113833 GSE113834 GSE113838 |
| Parrinello, Simona et al. (2008) NF1 loss disrupts Schwann cell-axonal interactions: a novel role for semaphorin 4F.; Genes Dev, 22: 3335-48 |
|
GSE10376 |
| Parris, Toshima Z et al. (2010) Clinical implications of gene dosage and gene expression patterns in diploid breast carcinoma.; Clin Cancer Res, 16: 3860-74 |
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GSE20462 |
| Parry, Traci L et al. (2016) Fenofibrate unexpectedly induces cardiac hypertrophy in mice lacking MuRF1.; Cardiovasc Pathol, 25: 127-40 |
|
GSE68480 |
| Parsai, Louis-Habib et al. (2025) Astrocyte-neuron combined targeting for CYP46A1 gene therapy in Huntington's disease.; Acta Neuropathol Commun, 13: 184 |
|
GSE220224 |
| Parween, Shama et al. (2022) Nutrient sensitive proteinO-GlcNAcylation modulates the transcriptome through epigenetic mechanisms during embryonic neurogenesis.; Life Sci Alliance, 5: [no pages] |
|
GSE169649 |
| Paryani, Fahad et al. (2024) Multi-omic analysis of Huntington's disease reveals a compensatory astrocyte state.; Nat Commun, 15: 6742 |
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GSE242198.3 GSE242198.2 GSE242195 GSE242198.1 |
| Pașca, Anca M et al. (2019) Human 3D cellular model of hypoxic brain injury of prematurity.; Nat Med, 25: 784-791 |
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GSE112137 |