List of all 21,870 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Pascal, Laura E et al. (2009) Gene expression down-regulation in CD90+ prostate tumor-associated stromal cells involves potential organ-specific genes.; BMC Cancer, 9: 317 |
|
GSE17906 |
| Pascal, Laura E et al. (2018) EAF2 and p53 Co-Regulate STAT3 Activation in Prostate Cancer.; Neoplasia, 20: 351-363 |
|
GSE104729 |
| Paschaki, Marie et al. (2013) Transcriptomic analysis of murine embryos lacking endogenous retinoic acid signaling.; PLoS One, 8: e62274 |
|
GSE43578 |
| Paschos, Georgios K et al. (2012) Obesity in mice with adipocyte-specific deletion of clock component Arntl.; Nat Med, 18: 1768-77 |
|
GSE35026 |
| Pascual Cuadrado, Diego et al. (2021) Dichotomic Hippocampal Transcriptome After Glutamatergic vs. GABAergic Deletion of the Cannabinoid CB1 Receptor.; Front Synaptic Neurosci, 13: 660718 |
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GSE168873 |
| Pascual, Gloria et al. (2021) Dietary palmitic acid promotes a prometastatic memory via Schwann cells.; Nature, 599: 485-490 |
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GSE148317 GSE148318 GSE148320 GSE148319 |
| Pascutti, Maria Fernanda et al. (2013) IL-21 and CD40L signals from autologous T cells can induce antigen-independent proliferation of CLL cells.; Blood, 122: 3010-9 |
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GSE50572 |
| Pashaj, Anjeza et al. (2013) Characterization of genome-wide transcriptional changes in liver and adipose tissues of ZDF (fa/fa) rats fed R-?-lipoic acid by next-generation sequencing.; Physiol Genomics, 45: 1136-43 |
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GSE50424 |
| Pasieka, Tracy Jo et al. (2011) Functional genomics reveals an essential and specific role for Stat1 in protection of the central nervous system following herpes simplex virus corneal infection.; J Virol, 85: 12972-81 |
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GSE35943 |
| Pasos, Jhonatan et al. (2025) Angiotensin AT1R expressing cells within the ventral hypothalamus modulate integrative control of cardiometabolic functions.; iScience, 28: 112797 |
|
GSE284096 |
| Pasqualucci, Laura et al. (2008) AID is required for germinal center-derived lymphomagenesis.; Nat Genet, [no vol.]: [no pages] |
|
GSE9249 |
| Pasquetti, Gianni et al. (2026) NKX6.1mRNA copy number is an actionable biomarker associated with islet function and clinical outcomes after islet transplantation.; Sci Transl Med, 18: eaed3562 |
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GSE324084.2 |
| Passeri, Laura et al. (2023) Tolerogenic IL-10-engineered dendritic cell-based therapy to restore antigen-specific tolerance in T cell mediated diseases.; J Autoimmun, 138: 103051 |
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GSE199425 |
| Passero, Frank C et al. (2019) Combinatorial ixazomib and belinostat therapy induces NFE2L2-dependent apoptosis in Hodgkin and T-cell lymphoma.; Br J Haematol, 188: 295-308 |
|
GSE126768 |
| Passman, Adam M et al. (2016) A Transcriptomic Signature of Mouse Liver Progenitor Cells.; Stem Cells Int, 2016: 5702873 |
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GSE85114 |
| Passtoors, Willemijn M et al. (2012) Transcriptional profiling of human familial longevity indicates a role for ASF1A and IL7R.; PLoS One, 7: e27759 |
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GSE16717 |
| Pastushenko, Ievgenia et al. (2021) Fat1 deletion promotes hybrid EMT state, tumour stemness and metastasis.; Nature, 589: 448-455 |
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GSE158502 |
| Pasupuleti, Santhosh Kumar et al. (2023) Obesity-induced inflammation exacerbates clonal hematopoiesis.; J Clin Invest, 133: [no pages] |
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GSE193062 |
| Patakas, Agapitos et al. (2016) Abatacept Inhibition of T Cell Priming in Mice by Induction of a Unique Transcriptional Profile That Reduces Their Ability to Activate Antigen-Presenting Cells.; Arthritis Rheumatol, 68: 627-38 |
|
GSE62089 |
| Pataky, Mark W et al. (2023) Impact of biological sex and sex hormones on molecular signatures of skeletal muscle at rest and in response to distinct exercise training modes.; Cell Metab, 35: 1996-2010.e6 |
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GSE231324 |
| Patani, Rickie et al. (2012) Investigating the utility of human embryonic stem cell-derived neurons to model ageing and neurodegenerative disease using whole-genome gene expression and splicing analysis.; J Neurochem, 122: 738-51 |
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GSE34865.2 GSE34865.1 |
| Pataskar, Abhijeet et al. (2016) NeuroD1 reprograms chromatin and transcription factor landscapes to induce the neuronal program.; EMBO J, 35: 24-45 |
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GSE65072 |
| Patel, Ayushi S et al. (2021) Prototypical oncogene family Myc defines unappreciated distinct lineage states of small cell lung cancer.; Sci Adv, 7: [no pages] |
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GSE156328 |
| Patel, Hamel et al. (2019) Transcriptomic analysis of probable asymptomatic and symptomatic alzheimer brains.; Brain Behav Immun, 80: 644-656 |
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GSE118553 |
| Patel, Misaal et al. (2021) Gsx1 promotes locomotor functional recovery after spinal cord injury.; Mol Ther, 29: 2469-2482 |
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GSE171441 |
| Patel, Mital Y et al. (2024) Impact of dietary changes on retinal neuronal plasticity in rodent models of physical and psychological trauma.; Front Genet, 15: 1373447 |
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GSE243996 |
| Patel, Naimish R et al. (2012) Cell elasticity determines macrophage function.; PLoS One, 7: e41024 |
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GSE36878 |
| Patel, Nikul et al. (2012) DNA methylation and gene expression profiling of ewing sarcoma primary tumors reveal genes that are potential targets of epigenetic inactivation.; Sarcoma, 2012: 498472 |
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GSE36858 |
| Patel, Nirav J et al. (2020) Ancestral Folate Promotes Neuronal Regeneration in Serial Generations of Progeny.; Mol Neurobiol, 57: 2048-2071 |
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GSE137641 |
| Patel, Osman V et al. (2011) Homeorhetic adaptation to lactation: comparative transcriptome analysis of mammary, liver, and adipose tissue during the transition from pregnancy to lactation in rats.; Funct Integr Genomics, 11: 193-202 |
|
GSE12132 |
| Patel, Reesha R et al. (2022) Ethanol withdrawal-induced adaptations in prefrontal corticotropin releasing factor receptor 1-expressing neurons regulate anxiety and conditioned rewarding effects of ethanol.; Mol Psychiatry, 27: 3441-3451 |
|
GSE202936 |
| Patel, Saroor A et al. (2022) The renal lineage factor PAX8 controls oncogenic signalling in kidney cancer.; Nature, 606: 999-1006 |
|
GSE162948 |
| Patel, Shaili D et al. (2022) Deficiency of the bZIP transcription factors Mafg and Mafk causes misexpression of genes in distinct pathways and results in lens embryonic developmental defects.; Front Cell Dev Biol, 10: 981893 |
|
GSE207853 |
| Patel, Sweta B et al. (2021) Metabolic alterations mediated by STAT3 promotes drug persistence in CML.; Leukemia, 35: 3371-3382 |
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GSE174800 GSE152706 |
| Patel, Tulsi et al. (2022) Transcriptional dynamics of murine motor neuron maturation in vivo and in vitro.; Nat Commun, 13: 5427 |
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GSE198767 |
| Patel, Vishal N et al. (2010) Prediction and testing of biological networks underlying intestinal cancer.; PLoS One, 5: [no pages] |
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GSE19338 |
| Patel-Murray, Natasha L et al. (2020) A Multi-Omics Interpretable Machine Learning Model Reveals Modes of Action of Small Molecules.; Sci Rep, 10: 954 |
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GSE129144 |
| Paterka, Magdalena et al. (2016) Gatekeeper role of brain antigen-presenting CD11c+ cells in neuroinflammation.; EMBO J, 35: 89-101 |
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GSE57098 |
| Pathania, Manav et al. (2017) H3.3K27MCooperates with Trp53 Loss and PDGFRA Gain in Mouse Embryonic Neural Progenitor Cells to Induce Invasive High-Grade Gliomas.; Cancer Cell, 32: 684-700.e9 |
|
GSE95277 |
| Patierno, Brendon M et al. (2022) Characterization of a castrate-resistant prostate cancer xenograft derived from a patient of West African ancestry.; Prostate Cancer Prostatic Dis, 25: 513-523 |
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GSE146402 |
| Patki, Mugdha et al. (2013) The ETS domain transcription factor ELK1 directs a critical component of growth signaling by the androgen receptor in prostate cancer cells.; J Biol Chem, 288: 11047-65 |
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GSE34589 |
| Patmore, Deanna M et al. (2020) DDX3X Suppresses the Susceptibility of Hindbrain Lineages to Medulloblastoma.; Dev Cell, 54: 455-470.e5 |
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GSE147178 |
| Patra, Milan et al. (2024) Senescence of human pancreatic beta cells enhances functional maturation through chromatin reorganization and promotes interferon responsiveness.; Nucleic Acids Res, 52: 6298-6316 |
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GSE207816 |
| Patra-Kneuer, Maria et al. (2023) Activity of tafasitamab in combination with rituximab in subtypes of aggressive lymphoma.; Front Immunol, 14: 1220558 |
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GSE211829 |
| Patrick, Ralph et al. (2024) The activity of early-life gene regulatory elements is hijacked in aging through pervasive AP-1-linked chromatin opening.; Cell Metab, 36: 1858-1881.e23 |
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GSE223049 |
| Patrikainen, Maarit S et al. (2016) Altered gene expression in the lower respiratory tract of Car6 (-/-) mice.; Transgenic Res, [no vol.]: [no pages] |
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GSE73755 |
| Patritti-Cram, Jennifer et al. (2024) NF1-dependent disruption of the blood-nerve-barrier is improved by blockade of P2RY14.; iScience, 27: 110294 |
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GSE189189 |
| Patrício, Patrícia et al. (2015) Differential and converging molecular mechanisms of antidepressants' action in the hippocampal dentate gyrus.; Neuropsychopharmacology, 40: 338-49 |
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GSE56028 |
| Pattacini, Laura et al. (2013) Differential regulatory T cell activity in HIV type 1-exposed seronegative individuals.; AIDS Res Hum Retroviruses, 29: 1321-9 |
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GSE38778 |
| Pattee, Jack et al. (2022) Evaluation and characterization of expression quantitative trait analysis methods in the Hybrid Rat Diversity Panel.; Front Genet, 13: 947423 |
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GSE243029 GSE199986 GSE199976 GSE199984 |
| Patten, Glen S et al. (2015) Resistant Starch Alters Colonic Contractility and Expression of Related Genes in Rats Fed a Western Diet.; Dig Dis Sci, [no vol.]: [no pages] |
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GSE32312 |
| Patterson, Angela M et al. (2017) Human Gut SymbiontRoseburia hominisPromotes and Regulates Innate Immunity.; Front Immunol, 8: 1166 |
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GSE25544 |
| Patterson, Ethan S et al. (2014) Geminin loss causes neural tube defects through disrupted progenitor specification and neuronal differentiation.; Dev Biol, 393: 44-56 |
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GSE42052 |
| Patterson, Joseph R et al. (2024) Transcriptomic profiling of early synucleinopathy in rats induced with preformed fibrils.; NPJ Parkinsons Dis, 10: 7 |
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GSE246112 |
| Patterson, Molly R et al. (2024) The Hippo pathway transcription factors YAP and TAZ play HPV-type dependent roles in cervical cancer.; Nat Commun, 15: 5809 |
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GSE261673 |
| Patti, Mary Elizabeth et al. (2003) Coordinated reduction of genes of oxidative metabolism in humans with insulin resistance and diabetes: Potential role of PGC1 and NRF1.; Proc Natl Acad Sci U S A, 100: 8466-71 |
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GSE21340 |
| Pau Ni, Ivyna Bong et al. (2010) Gene expression patterns distinguish breast carcinomas from normal breast tissues: the Malaysian context.; Pathol Res Pract, 206: 223-8 |
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GSE15852 |
| Paudel, Praveen et al. (2020) Prenatal Alcohol Exposure Results in Sex-Specific Alterations in Circular RNA Expression in the Developing Mouse Brain.; Front Neurosci, 14: 581895 |
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GSE154018 |
| Paudel, Siddhi N et al. (2024) Myelomodulatory treatments augment the therapeutic benefit of oncolytic viroimmunotherapy in murine models of malignant peripheral nerve sheath tumors.; Front Immunol, 15: 1384623 |
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GSE244829 |
| Paugh, Barbara S et al. (2013) Novel oncogenic PDGFRA mutations in pediatric high-grade gliomas.; Cancer Res, 73: 6219-29 |
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GSE46190 |
| Paul, Anirban et al. (2012) Developmental Coordination of Gene Expression between Synaptic Partners During GABAergic Circuit Assembly in Cerebellar Cortex.; Front Neural Circuits, 6: 37 |
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GSE37055 |
| Paul, Anirban et al. (2017) Transcriptional Architecture of Synaptic Communication Delineates GABAergic Neuron Identity.; Cell, 171: 522-539.e20 |
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GSE92522 |
| Paul, Catriona et al. (2011) Aging results in differential regulation of DNA repair pathways in pachytene spermatocytes in the Brown Norway rat.; Biol Reprod, 85: 1269-78 |
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GSE29963 |
| Paul, Jinny A et al. (2017) Transcriptomic analysis of gene signatures associated with sickle pain.; Sci Data, 4: 170051 |
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GSE86418 |
| Paul, Leena et al. (2016) Lack of Prox1 Downregulation Disrupts the Expansion and Maturation of Postnatal Murine β-Cells.; Diabetes, 65: 687-98 |
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GSE68133 |
| Paul, Raikamal et al. (2021) MiR-592 activates the mTOR kinase, ERK1/ERK2 kinase signaling and imparts neuronal differentiation signature characteristic of group 4 medulloblastoma.; Hum Mol Genet, [no vol.]: [no pages] |
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GSE147145 |
| Paul, Sayantanee et al. (2025) Cooperation between the Hippo and MAPK pathway activation drives acquired resistance to TEAD inhibition.; Nat Commun, 16: 1743 |
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GSE246578 GSE246583 |
| Paul, Sunirmal et al. (2008) Development of gene expression signatures for practical radiation biodosimetry.; Int J Radiat Oncol Biol Phys, 71: 1236-1244 |
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GSE8917 |
| Paul, Sunirmal et al. (2011) Gene expression signatures of radiation exposure in peripheral white blood cells of smokers and non-smokers.; Int J Radiat Biol, 87: 791-801 |
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GSE23515 |
| Paul, Sunirmal et al. (2011) Prediction of in vivo radiation dose status in radiotherapy patients using ex vivo and in vivo gene expression signatures.; Radiat Res, 175: 257-65 |
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GSE20162 |
| Paul, Sunirmal et al. (2014) Gene expression response of mice after a single dose of 137CS as an internal emitter.; Radiat Res, 182: 380-9 |
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GSE52690 |
| Paul, Sunirmal et al. (2015) Radiation Dose-Rate Effects on Gene Expression in a Mouse Biodosimetry Model.; Radiat Res, 184: 24-32 |
|
GSE62623 |
| Paul-Clark, Mark et al. (2016) Profound Chemopreventative Effects of a Hydrogen Sulfide-Releasing NSAID in the APCMin/+ Mouse Model of Intestinal Tumorigenesis.; PLoS One, 11: e0147289 |
|
GSE76928 |
| Paulding, David et al. (2026) Cranial neural crest shortage leads to extensive craniofacial anomalies in mice mutant for the NR2F1/2 nuclear receptors.; Dev Biol, 530: 102-118 |
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GSE295092 |
| Pauleikhoff, Laurenz et al. (2023) Transcriptional Comparison of Human and Murine Retinal Neovascularization.; Invest Ophthalmol Vis Sci, 64: 46 |
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GSE234447 |
| Pauls, Eduardo et al. (2021) Identification and drug-induced reversion of molecular signatures of Alzheimer's disease onset and progression in AppNL-G-F, AppNL-F, and 3xTg-AD mouse models.; Genome Med, 13: 168 |
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GSE168429 GSE168430 GSE168428 |
| Paun, Alexandra et al. (2012) Genomic and genome-wide association of susceptibility to radiation-induced fibrotic lung disease in mice.; Radiother Oncol, 105: 350-7 |
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GSE2250 |
| Pauža, Audrys G et al. (2021) Osmoregulation of the transcriptome of the hypothalamic supraoptic nucleus: A resource for the community.; J Neuroendocrinol, 33: e13007 |
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GSE175461 |
| Pavan, Simona et al. (2013) IRF-1 expression is induced by cisplatin in ovarian cancer cells and limits drug effectiveness.; Eur J Cancer, 49: 964-73 |
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GSE38551 |
| Pavic, Goran et al. (2021) Microglia contributes to remyelination in cerebral but not spinal cord ischemia.; Glia, 69: 2739-2751 |
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GSE167274 |
| Pavkovic, Mira et al. (2019) Multi omics analysis of fibrotic kidneys in two mouse models.; Sci Data, 6: 92 |
|
GSE118339 |
| Pavlaki, Ioanna et al. (2018) Poly(ADP-ribosyl)ation associated changes in CTCF-chromatin binding and gene expression in breast cells.; Biochim Biophys Acta Gene Regul Mech, 1861: 718-730 |
|
GSE102237 |
| Pavlaki, Ioanna et al. (2018) The long non-coding RNAPauparpromotes KAP1-dependent chromatin changes and regulates olfactory bulb neurogenesis.; EMBO J, 37: [no pages] |
|
GSE110031 |
| Pavlopoulos, Elias et al. (2013) Molecular mechanism for age-related memory loss: the histone-binding protein RbAp48.; Sci Transl Med, 5: 200ra115 |
|
GSE46193 |
| Pavlou, Andreas et al. (2025) MAVS signaling of long-lived brain-resident myeloid cells is needed during viral encephalitis to adjust the transcriptome of CNS infiltrating CD8+T cells.; J Neuroinflammation, 22: 175 |
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GSE301690 GSE301540 |
| Pavlou, Maria Angeliki S et al. (2023) Transcriptional and Chromatin Accessibility Profiling of Neural Stem Cells Differentiating into Astrocytes Reveal Dynamic Signatures Affected under Inflammatory Conditions.; Cells, 12: [no pages] |
|
GSE225728 |
| Pavon-Eternod, Mariana et al. (2009) tRNA over-expression in breast cancer and functional consequences.; Nucleic Acids Res, 37: 7268-80 |
|
E-TABM-157 |
| Pavón, M A et al. (2012) Gene expression signatures and molecular markers associated with clinical outcome in locally advanced head and neck carcinoma.; Carcinogenesis, 33: 1707-16 |
|
GSE23036 |