List of all 21,870 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Quaranta, Roberto et al. (2018) Revised roles of ISL1 in a hES cell-based model of human heart chamber specification.; Elife, 7: [no pages] |
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GSE100592 |
| Quarta, Carmelo et al. (2017) Molecular Integration of Incretin and Glucocorticoid Action Reverses Immunometabolic Dysfunction and Obesity.; Cell Metab, 26: 620-632.e6 |
|
GSE102415 |
| Quarta, Carmelo et al. (2019) Functional identity of hypothalamic melanocortin neurons depends on Tbx3.; Nat Metab, 1: 222-235 |
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GSE119883 |
| Quartier, Angélique et al. (2018) Genes and Pathways Regulated by Androgens in Human Neural Cells, Potential Candidates for the Male Excess in Autism Spectrum Disorder.; Biol Psychiatry, 84: 239-252 |
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GSE86457 |
| Quartier, Pierre et al. (2011) A multicentre, randomised, double-blind, placebo-controlled trial with the interleukin-1 receptor antagonist anakinra in patients with systemic-onset juvenile idiopathic arthritis (ANAJIS trial).; Ann Rheum Dis, 70: 747-54 |
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GSE17590 |
| Quesnel-Vallières, Mathieu et al. (2015) Essential roles for the splicing regulator nSR100/SRRM4 during nervous system development.; Genes Dev, 29: 746-59 |
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GSE65818 |
| Quesnel-Vallières, Mathieu et al. (2016) Misregulation of an Activity-Dependent Splicing Network as a Common Mechanism Underlying Autism Spectrum Disorders.; Mol Cell, 64: 1023-1034 |
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GSE89984 |
| Quigley, David A et al. (2011) Network analysis of skin tumor progression identifies a rewired genetic architecture affecting inflammation and tumor susceptibility.; Genome Biol, 12: R5 |
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GSE21247 GSE21263 |
| Quigley, David A et al. (2014) The 5p12 breast cancer susceptibility locus affects MRPS30 expression in estrogen-receptor positive tumors.; Mol Oncol, 8: 273-84 |
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GSE48067 |
| Quigley, David A et al. (2016) Gene Expression Architecture of Mouse Dorsal and Tail Skin Reveals Functional Differences in Inflammation and Cancer.; Cell Rep, 16: 1153-1165 |
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GSE82067 |
| Quigley, Michael et al. (2010) Transcriptional analysis of HIV-specific CD8+ T cells shows that PD-1 inhibits T cell function by upregulating BATF.; Nat Med, 16: 1147-51 |
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GSE24081 GSE24026 |
| Quillé, Marie-Lise et al. (2011) High-throughput analysis of promoter occupancy reveals new targets for Arx, a gene mutated in mental retardation and interneuronopathies.; PLoS One, 6: e25181 |
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GSE30190 |
| Quinlan, Seán et al. (2024) Early life phenobarbital exposure dysregulates the hippocampal transcriptome.; Front Pharmacol, 15: 1340691 |
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GSE247577 |
| Quinn, Matthew A et al. (2018) Estrogen Deficiency Promotes Hepatic Steatosis via a Glucocorticoid Receptor-Dependent Mechanism in Mice.; Cell Rep, 22: 2690-2701 |
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GSE99309 |
| Quintanal-Villalonga, Alvaro et al. (2024) CDC7 inhibition impairs neuroendocrine transformation in lung and prostate tumors through MYC degradation.; Signal Transduct Target Ther, 9: 189 |
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GSE252567 GSE252566 |
| Quintela, Telma et al. (2013) Analysis of the effects of sex hormone background on the rat choroid plexus transcriptome by cDNA microarrays.; PLoS One, 8: e60199 |
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GSE87045 |
| Quintela, Telma et al. (2015) Gene expression profiling in the hippocampus of orchidectomized rats.; J Mol Neurosci, 55: 198-205 |
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GSE87188 |
| Quintes, Susanne et al. (2016) Zeb2 is essential for Schwann cell differentiation, myelination and nerve repair.; Nat Neurosci, 19: 1050-1059 |
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GSE76027 |
| Quinti, Luisa et al. (2016) SIRT2- and NRF2-Targeting Thiazole-Containing Compound with Therapeutic Activity in Huntington's Disease Models.; Cell Chem Biol, 23: 849-861 |
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GSE49392 |
| Quinton, Lee J et al. (2012) Hepatocyte-specific mutation of both NF-?B RelA and STAT3 abrogates the acute phase response in mice.; J Clin Invest, 122: 1758-63 |
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GSE35516 |
| Quiroga, I Y et al. (2022) Synthetic amyloid beta does not induce a robust transcriptional response in innate immune cell culture systems.; J Neuroinflammation, 19: 99 |
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GSE181153 |
| Quiroz-Figueroa, Katherine et al. (2021) TRIB1 regulates LDL metabolism through CEBPα-mediated effects on the LDL receptor in hepatocytes.; J Clin Invest, 131: [no pages] |
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GSE158815 |
| Raas, Quentin et al. (2023) Peroxisomal defects in microglial cells induce a disease-associated microglial signature.; Front Mol Neurosci, 16: 1170313 |
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GSE200022 |
| Rabadan, M Angeles et al. (2022) An in vitro model of neuronal ensembles.; Nat Commun, 13: 3340 |
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GSE123652 |
| Rabani, Michal et al. (2014) High-resolution sequencing and modeling identifies distinct dynamic RNA regulatory strategies.; Cell, 159: 1698-710 |
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GSE56977.2 |
| Rabenstein, Hannah et al. (2014) Differential kinetics of antigen dependency of CD4+ and CD8+ T cells.; J Immunol, 192: 3507-17 |
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GSE49063 |
| Rabiee, Atefeh et al. (2021) White adipose remodeling during browning in mice involves YBX1 to drive thermogenic commitment.; Mol Metab, 44: 101137 |
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GSE149083 |
| Rabin, Stuart J et al. (2010) Sporadic ALS has compartment-specific aberrant exon splicing and altered cell-matrix adhesion biology.; Hum Mol Genet, 19: 313-28 |
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GSE18920 |
| Rabot, Sylvie et al. (2010) Germ-free C57BL/6J mice are resistant to high-fat-diet-induced insulin resistance and have altered cholesterol metabolism.; FASEB J, 24: 4948-59 |
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GSE19038 |
| Rached, Marie-Therese et al. (2019) Deletion of myeloid IRS2 enhances adipose tissue sympathetic nerve function and limits obesity.; Mol Metab, 20: 38-50 |
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GSE123180 |
| Racioppi, Luigi et al. (2017) Calcium/calmodulin-dependent kinase kinase 2 regulates hematopoietic stem and progenitor cell regeneration.; Cell Death Dis, 8: e3076 |
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GSE95733 |
| Radcliffe, Richard A et al. (2020) Systems genetics analysis of the LXS recombinant inbred mouse strains:Genetic and molecular insights into acute ethanol tolerance.; PLoS One, 15: e0240253 |
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GSE157215 |
| Rademacher, Sebastian et al. (2025) PTEN controls alternative splicing of autism spectrum disorder-associated transcripts in primary neurons.; Brain, 148: 47-54 |
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GSE182975 |
| Rademakers, Rosa et al. (2021) Loss of Tmem106b leads to cerebellum Purkinje cell death and motor deficits.; Brain Pathol, [no vol.]: e12945 |
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GSE165105 |
| Radenkovic, Silvia et al. (2024) Neural and metabolic dysregulation in PMM2-deficient human in vitro neural models.; Cell Rep, 43: 113883 |
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GSE251886 |
| Radom-Aizik, Shlomit et al. (2005) Effects of aerobic training on gene expression in skeletal muscle of elderly men.; Med Sci Sports Exerc, 37: 1680-96 |
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GSE1786 |
| Radom-Aizik, Shlomit et al. (2008) Effects of 30 min of aerobic exercise on gene expression in human neutrophils.; J Appl Physiol (1985), 104: 236-43 |
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GSE8668 |
| Radom-Aizik, Shlomit et al. (2009) A brief bout of exercise alters gene expression and distinct gene pathways in peripheral blood mononuclear cells of early- and late-pubertal females.; J Appl Physiol (1985), [no vol.]: [no pages] |
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GSE14642 |
| Radom-Aizik, Shlomit et al. (2009) Brief bout of exercise alters gene expression in peripheral blood mononuclear cells of early- and late-pubertal males.; Pediatr Res, [no vol.]: [no pages] |
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GSE11761 |
| Radonjic, Marijana et al. (2013) Differential effects of drug interventions and dietary lifestyle in developing type 2 diabetes and complications: a systems biology analysis in LDLr-/- mice.; PLoS One, 8: e56122 |
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GSE57659 |
| Radosevic-Robin, Nina et al. (2021) Recurrence biomarkers of triple negative breast cancer treated with neoadjuvant chemotherapy and anti-EGFR antibodies.; NPJ Breast Cancer, 7: 124 |
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GSE180775 |
| Radtke, Ina et al. (2009) Genomic analysis reveals few genetic alterations in pediatric acute myeloid leukemia.; Proc Natl Acad Sci U S A, 106: 12944-9 |
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GSE14471 |
| Raetz, Elizabeth A et al. (2006) Gene expression profiling reveals intrinsic differences between T-cell acute lymphoblastic leukemia and T-cell lymphoblastic lymphoma.; Pediatr Blood Cancer, 47: 130-40 |
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GSE1577 |
| Rafalski, Victoria A et al. (2013) Expansion of oligodendrocyte progenitor cells following SIRT1 inactivation in the adult brain.; Nat Cell Biol, 15: 614-24 |
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GSE36997 |
| Raffaello, Anna et al. (2010) JunB transcription factor maintains skeletal muscle mass and promotes hypertrophy.; J Cell Biol, 191: 101-13 |
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GSE18664 |
| Raffel, Simon et al. (2017) BCAT1 restricts αKG levels in AML stem cells leading to IDHmut-like DNA hypermethylation.; Nature, 551: 384-388 |
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GSE100778 GSE103960 |
| Rafnsdottir, Salvor et al. (2024) SMYD5 is a regulator of the mild hypothermia response.; Cell Rep, 43: 114554 |
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GSE234688 |
| Ragancokova, Daniela et al. (2014) TSHZ1-dependent gene regulation is essential for olfactory bulb development and olfaction.; J Clin Invest, 124: 1214-27 |
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GSE51761 |
| Raggi, Chiara et al. (2021) Mitochondrial oxidative metabolism contributes to a cancer stem cell phenotype in cholangiocarcinoma.; J Hepatol, 74: 1373-1385 |
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GSE162845 |
| Raghavachari, Nalini et al. (2007) Amplified expression profiling of platelet transcriptome reveals changes in arginine metabolic pathways in patients with sickle cell disease.; Circulation, [no vol.]: [no pages] |
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GSE11524 |
| Raghavachari, Nalini et al. (2009) Characterization of whole blood gene expression profiles as a sequel to globin mRNA reduction in patients with sickle cell disease.; PLoS One, 4: e6484 |
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GSE16728 |
| Raghu, Rajasekaran et al. (2012) Transcriptome analysis of garlic-induced hepatoprotection against alcoholic fatty liver.; J Agric Food Chem, 60: 11104-19 |
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GSE40334 |
| Raghunandan, Sindhushree et al. (2021) Heme Oxygenase-1 at the Nexus of Endothelial Cell Fate Decision Under Oxidative Stress.; Front Cell Dev Biol, 9: 702974 |
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GSE72991 |
| Rahal, Rami et al. (2014) Pharmacological and genomic profiling identifies NF-?B-targeted treatment strategies for mantle cell lymphoma.; Nat Med, 20: 87-92 |
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GSE52435 GSE42549 GSE52434 |
| Raheem, Olayinka et al. (2010) Mutant (CCTG)n expansion causes abnormal expression of zinc finger protein 9 (ZNF9) in myotonic dystrophy type 2.; Am J Pathol, 177: 3025-36 |
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GSE7014 |
| Rahib, Lola et al. (2007) Glycerol kinase deficiency alters expression of genes involved in lipid metabolism, carbohydrate metabolism, and insulin signaling.; Eur J Hum Genet, 15: 646-57 |
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GSE4656 |
| Rahimian, Reza et al. (2024) Targeting SRSF3 restores immune mRNA translation in microglia/macrophages following cerebral ischemia.; Mol Ther, 32: 783-799 |
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GSE232244 |
| Rahimov, Fedik et al. (2011) Gene expression profiling of skeletal muscles treated with a soluble activin type IIB receptor.; Physiol Genomics, 43: 398-407 |
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GSE25306 |
| Rahimov, Fedik et al. (2012) Transcriptional profiling in facioscapulohumeral muscular dystrophy to identify candidate biomarkers.; Proc Natl Acad Sci U S A, [no vol.]: [no pages] |
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GSE36398 |
| Rahman, M Jubayer et al. (2016) Despite Increased Type 1 IFN, Autoimmune Nonobese Diabetic Mice Display Impaired Dendritic Cell Response to CpG and Decreased Nuclear Localization of IFN-Activated STAT1.; J Immunol, 196: 2031-40 |
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GSE75883 |
| Rahman, Md Taibur et al. (2021) The Redox Homeostasis of Skeletal Muscle Cells Regulates Stage Differentiation ofToxoplasma gondii.; Front Cell Infect Microbiol, 11: 798549 |
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GSE133952 |
| Rahman, Razia et al. (2024) CDK9 inhibition inhibits multiple oncogenic transcriptional and epigenetic pathways in prostate cancer.; Br J Cancer, 131: 1092-1105 |
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GSE244716 |
| Rahmati Nezhad, Pegah et al. (2021) Complement factor I upregulates expression of matrix metalloproteinase-13 and -2 and promotes invasion of cutaneous squamous carcinoma cells.; Exp Dermatol, [no vol.]: [no pages] |
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GSE166421 |
| Rahme, Gilbert J et al. (2016) PDGF Engages an E2F-USP1 Signaling Pathway to Support ID2-Mediated Survival of Proneural Glioma Cells.; Cancer Res, 76: 2964-76 |
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GSE77419 GSE77423 |
| Rahme, Gilbert J et al. (2018) A recombinant lentiviral PDGF-driven mouse model of proneural glioblastoma.; Neuro Oncol, 20: 332-342 |
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GSE99361 |
| Rai, Mamta et al. (2021) Proteasome stress in skeletal muscle mounts a long-range protective response that delays retinal and brain aging.; Cell Metab, 33: 1137-1154.e9 |
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GSE149797 |
| Rai, Myriam et al. (2008) HDAC inhibitors correct frataxin deficiency in a Friedreich ataxia mouse model.; PLoS One, 3: e1958 |
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GSE10745 |
| Raia, Valentina et al. (2011) Dynamic mathematical modeling of IL13-induced signaling in Hodgkin and primary mediastinal B-cell lymphoma allows prediction of therapeutic targets.; Cancer Res, 71: 693-704 |
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GSE23591 |
| Raices, Marcela et al. (2017) Nuclear Pores Regulate Muscle Development and Maintenance by Assembling a Localized Mef2C Complex.; Dev Cell, 41: 540-554.e7 |
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GSE98318 |
| Raine, Tim et al. (2015) Generation of primary human intestinal T cell transcriptomes reveals differential expression at genetic risk loci for immune-mediated disease.; Gut, 64: 250-9 |
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GSE49877 |
| Rainer, J et al. (2009) Glucocorticoid-regulated microRNAs and mirtrons in acute lymphoblastic leukemia.; Leukemia, 23: 746-52 |
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GSE11336 |
| Raines, Anna M et al. (2013) Recombineering-based dissection of flanking and paralogous Hox gene functions in mouse reproductive tracts.; Development, 140: 2942-52 |
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GSE42339 GSE41993 |
| Raitano, Susanna et al. (2015) Restoration of progranulin expression rescues cortical neuron generation in an induced pluripotent stem cell model of frontotemporal dementia.; Stem Cell Reports, 4: 16-24 |
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GSE60902 |
| Raj, Bushra et al. (2014) A global regulatory mechanism for activating an exon network required for neurogenesis.; Mol Cell, 56: 90-103 |
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GSE57278.2 |
| Raj, Nisha et al. (2021) Cell-type-specific profiling of human cellular models of fragile X syndrome reveal PI3K-dependent defects in translation and neurogenesis.; Cell Rep, 35: 108991 |
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GSE146339 |
| Raja, Erna et al. (2022) The extracellular matrix fibulin 7 maintains epidermal stem cell heterogeneity during skin aging.; EMBO Rep, 23: e55478 |
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GSE185087 |
| Raja, Reesha et al. (2024) Insertion of a neomycin selection cassette in the Amigo1 locus alters gene expression in the olfactory epithelium leading to region-specific defects in olfactory receptor neuron development.; Genesis, 62: e23594 |
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GSE249314 |
| Rajagopalan, Adhithi et al. (2023) A gain-of-function p53 mutant synergizes with oncogenic NRAS to promote acute myeloid leukemia in mice.; J Clin Invest, 133: [no pages] |
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GSE243642 |
| Rajagopalan, Sumati et al. (2012) Cellular senescence induced by CD158d reprograms natural killer cells to promote vascular remodeling.; Proc Natl Acad Sci U S A, 109: 20596-601 |
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GSE35330 |
| Rajala, Ammaji et al. (2024) Age-related retinal degeneration resulting from the deletion of Shp2 tyrosine phosphatase in photoreceptor neurons.; Cell Death Dis, 15: 577 |
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GSE269514 |
| Rajamani, Uthra et al. (2018) Super-Obese Patient-Derived iPSC Hypothalamic Neurons Exhibit Obesogenic Signatures and Hormone Responses.; Cell Stem Cell, 22: 698-712.e9 |
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GSE95243 |
| Rajan, Prabhakar et al. (2014) Identification of a candidate prognostic gene signature by transcriptome analysis of matched pre- and post-treatment prostatic biopsies from patients with advanced prostate cancer.; BMC Cancer, 14: 977 |
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GSE51005 |
| Rajan, Prabhakar et al. (2014) Next-generation sequencing of advanced prostate cancer treated with androgen-deprivation therapy.; Eur Urol, 66: 32-9 |
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GSE48403 |
| Rajan, Saravanan et al. (2012) Analysis of early C2C12 myogenesis identifies stably and differentially expressed transcriptional regulators whose knock-down inhibits myoblast differentiation.; Physiol Genomics, 44: 183-97 |
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GSE16992 |
| Rajan, Sudarsan et al. (2013) Microarray analysis of active cardiac remodeling genes in a familial hypertrophic cardiomyopathy mouse model rescued by a phospholamban knockout.; Physiol Genomics, 45: 764-73 |
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GSE42892 |
| Rajaram, Megha et al. (2013) System-wide analysis reveals a complex network of tumor-fibroblast interactions involved in tumorigenicity.; PLoS Genet, 9: e1003789 |
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GSE41678 |
| Rajasekaran, Santhanasabapathy et al. (2024) Transcriptomic analysis of melanoma cells reveals an association of α-synuclein with regulation of the inflammatory response.; Sci Rep, 14: 27140 |
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GSE253046 |
| Rajderkar, Sudha et al. (2023) Topologically associating domain boundaries are required for normal genome function.; Commun Biol, 6: 435 |
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GSE172089 |
| Raje, Noopur et al. (2008) Clinical, radiographic, and biochemical characterization of multiple myeloma patients with osteonecrosis of the jaw.; Clin Cancer Res, 14: 2387-95 |
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GSE7116 |
| Rajebhosale, Prithviraj et al. (2024) Neuregulin1 Nuclear Signaling Influences Adult Neurogenesis and Regulates a Schizophrenia Susceptibility Gene Network within the Mouse Dentate Gyrus.; J Neurosci, 44: [no pages] |
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GSE268856 GSE192869 |
| Rajendiran, Vignesh et al. (2024) Base editing of key residues in the BCL11A-XL-specific zinc finger domains derepresses fetal globin expression.; Mol Ther, 32: 663-677 |
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GSE229989 |