List of all 16,773 published papers with data in Gemma:

To search for a paper or experiment and see more details, visit the annotated paper search page.

Sun, Michael A et al. (2023) Repurposing Clemastine to Target Glioblastoma Cell Stemness.; Cancers (Basel), 15: [no pages] PubMed link GSE186319  
Sun, Ming et al. (2016) Calcineurin-NFAT Signaling Controls Somatic Cell Reprogramming in a Stage-Dependent Manner.; J Cell Physiol, 231: 1151-62 PubMed link GSE67739  
Sun, Na et al. (2023) Human microglial state dynamics in Alzheimer's disease progression.; Cell, 186: 4386-4403.e29 PubMed link GSE227221  
Sun, Qiao-Ran et al. (2023) Nicotine exposure disrupts placental development via the Notch signaling pathway.; Reproduction, 166: 187-197 PubMed link GSE186660  
Sun, Shengyi et al. (2012) The ATP-P2X7 signaling axis is dispensable for obesity-associated inflammasome activation in adipose tissue.; Diabetes, 61: 1471-8 PubMed link GSE36033  
Sun, Shuying et al. (2015) Translational profiling identifies a cascade of damage initiated in motor neurons and spreading to glia in mutant SOD1-mediated ALS.; Proc Natl Acad Sci U S A, 112: E6993-7002 PubMed link GSE74724  
Sun, Wei et al. (2012) Transcriptome atlases of mouse brain reveals differential expression across brain regions and genetic backgrounds.; G3 (Bethesda), 2: 203-11 PubMed link GSE33822  
Sun, Wuping et al. (2020) A Transcriptomic Analysis of Neuropathic Pain in Rat Dorsal Root Ganglia Following Peripheral Nerve Injury.; Neuromolecular Med, 22: 250-263 PubMed link GSE117526  
Sun, Xinxin et al. (2015) Transcription factor Sp4 regulates expression of nervous wreck 2 to control NMDAR1 levels and dendrite patterning.; Dev Neurobiol, 75: 93-108 PubMed link GSE53061  
Sun, Xue-Lian et al. (2023) Stem cell competition driven by the Axin2-p53 axis controls brain size during murine development.; Dev Cell, 58: 744-759.e11 PubMed link GSE203163.1  
Sun, Xueqin et al. (2023) BRD8 maintains glioblastoma by epigenetic reprogramming of the p53 network.; Nature, 613: 195-202 PubMed link GSE158550  
Sun, Xuezheng et al. (2013) Relationship of mammographic density and gene expression: analysis of normal breast tissue surrounding breast cancer.; Clin Cancer Res, 19: 4972-82 PubMed link GSE49175  
Sun, Xuxu et al. (2017) Arid1a Has Context-Dependent Oncogenic and Tumor Suppressor Functions in Liver Cancer.; Cancer Cell, 32: 574-589.e6 PubMed link GSE95537  
Sun, Yan et al. (2021) Loss of ATF4 leads to functional aging-like attrition of adult hematopoietic stem cells.; Sci Adv, 7: eabj6877 PubMed link GSE132682  
Sun, Yan et al. (2022) S-palmitoylation of PCSK9 induces sorafenib resistance in liver cancer by activating the PI3K/AKT pathway.; Cell Rep, 40: 111194 PubMed link GSE183113  
Sun, Yan et al. (2023) MST2 methylation by PRMT5 inhibits Hippo signaling and promotes pancreatic cancer progression.; EMBO J, 42: e114558 PubMed link GSE241402  
Sun, Ye et al. [Unknown date]Inflammatory signals from photoreceptor modulate pathological retinal angiogenesis via c-Fos.; J Exp Med, 214: 1753-1767 PubMed link GSE78831  
Sun, Yi et al. (2022) SIRT1 activation attenuates microglia-mediated synaptic engulfment in postoperative cognitive dysfunction.; Front Aging Neurosci, 14: 943842 PubMed link GSE215410  
Sun, Yidan et al. (2023) MSL2 ensures biallelic gene expression in mammals.; Nature, 624: 173-181 PubMed link GSE227741   GSE231588  
Sun, Yijun et al. (2009) Optimizing molecular signatures for predicting prostate cancer recurrence.; Prostate, 69: 1119-27 PubMed link GSE25136  
Sun, Ying et al. (2008) Temporal gene expression profiling reveals CEBPD as a candidate regulator of brain disease in prosaposin deficient mice.; BMC Neurosci, 9: 76 PubMed link GSE8307  
Sun, Ying et al. (2023) IFN-γIs Protective in Cytokine Release Syndrome-associated Extrapulmonary Acute Lung Injury.; Am J Respir Cell Mol Biol, 68: 75-89 PubMed link GSE208651  
Sun, Yonglian et al. (2014) PILR? negatively regulates mouse inflammatory arthritis.; J Immunol, 193: 860-70 PubMed link GSE48780  
Sun, Yu et al. (2020) Lmo4-resistin signaling contributes to adipose tissue-liver crosstalk upon weight cycling.; FASEB J, 34: 4732-4748 PubMed link GSE134336  
Sun, Zhao et al. (2024) Modeling late-onset Alzheimer's disease neuropathology via direct neuronal reprogramming.; Science, 385: adl2992 PubMed link GSE267613   GSE253174   GSE252932  
Sun, Zhen-Cheng et al. (2022) The mechanism by which hyperbaric oxygen treatment alleviates spinal cord injury: genome-wide transcriptome analysis.; Neural Regen Res, 17: 2737-2742 PubMed link GSE185301  
Sun, Zhifu et al. (2011) Integrated analysis of gene expression, CpG island methylation, and gene copy number in breast cancer cells by deep sequencing.; PLoS One, 6: e17490 PubMed link GSE27003  
Sun, Zhun et al. (2023) B cell-derived IL-10 promotes the resolution of lipopolysaccharide-induced acute lung injury.; Cell Death Dis, 14: 418 PubMed link GSE236391  
Sun, Ziyu et al. (2025) Cooperation of TRADD- and RIPK1-dependent cell death pathways in maintaining intestinal homeostasis.; Nat Commun, 16: 1890 PubMed link GSE279702   GSE279700   GSE279034  
Sunadome, Kazunori et al. (2011) ERK5 regulates muscle cell fusion through Klf transcription factors.; Dev Cell, 20: 192-205 PubMed link GSE25827  
Sundaram, Venkat Krishnan et al. (2023) Adipo-glial signaling mediates metabolic adaptation in peripheral nerve regeneration.; Cell Metab, 35: 2136-2152.e9 PubMed link GSE244328  
Sundararajan, Vignesh et al. (2020) SNAI1-Driven Sequential EMT Changes Attributed by Selective Chromatin Enrichment of RAD21 and GRHL2.; Cancers (Basel), 12: [no pages] PubMed link GSE145553  
Sunderland, Ashley et al. (2023) Biglycan and reduced glycolysis are associated with breast cancer cell dormancy in the brain.; Front Oncol, 13: 1191980 PubMed link GSE220017  
Sundermeier, Thomas R et al. (2014) DICER1 is essential for survival of postmitotic rod photoreceptor cells in mice.; FASEB J, 28: 3780-91 PubMed link GSE55377  
Sundstrom, Jonathan et al. (2024) Herpes Simplex Virus 1 Infection of Human Brain Organoids and Pancreatic Stem Cell-Islets Drives Organoid-Specific Transcripts Associated with Alzheimer's Disease and Autoimmune Diseases.; Cells, 13: [no pages] PubMed link GSE272361  
Sung, Chang Ohk et al. (2011) Genomic profiling combined with gene expression profiling in primary central nervous system lymphoma.; Blood, 117: 1291-300 PubMed link GSE25299.2  
Sung, Hsu-Min et al. (2023) Stress-induced nuclear speckle reorganization is linked to activation of immediate early gene splicing.; J Cell Biol, 222: [no pages] PubMed link GSE231519   GSE231520  
Sung, Li-Ying et al. (2014) Telomere elongation and naive pluripotent stem cells achieved from telomerase haplo-insufficient cells by somatic cell nuclear transfer.; Cell Rep, 9: 1603-1609 PubMed link GSE62692  
Sunshine, Hannah L et al. (2024) Endothelial Jagged1 levels and distribution are post-transcriptionally controlled by ZFP36 decay proteins.; Cell Rep, 43: 113627 PubMed link GSE235462  
Suntsova, Maria et al. (2013) Human-specific endogenous retroviral insert serves as an enhancer for the schizophrenia-linked gene PRODH.; Proc Natl Acad Sci U S A, 110: 19472-7 PubMed link GSE43773  
Suo, Zizheng et al. (2024) Aged hippocampal single-cell atlas screening unveils disrupted neuroglial system in postoperative cognitive impairment.; Aging Cell, [no vol.]: e14406 PubMed link GSE267933  
Suppiah, Suganth et al. (2023) Multiplatform molecular profiling uncovers two subgroups of malignant peripheral nerve sheath tumors with distinct therapeutic vulnerabilities.; Nat Commun, 14: 2696 PubMed link GSE207400  
Sur, Surojit et al. (2009) A panel of isogenic human cancer cells suggests a therapeutic approach for cancers with inactivated p53.; Proc Natl Acad Sci U S A, 106: 3964-9 PubMed link GSE13886  
Suram, Saritha et al. (2010) Pathways regulating cytosolic phospholipase A2 activation and eicosanoid production in macrophages by Candida albicans.; J Biol Chem, 285: 30676-85 PubMed link GSE46533  
Sure, Florian et al. (2024) Transmembrane Serine Protease 2 and Proteolytic Activation of the Epithelial Sodium Channel in Mouse Kidney.; J Am Soc Nephrol, [no vol.]: [no pages] PubMed link GSE274304   GSE274305   GSE274306  
Suresh, Rahul et al. (2014) Transcriptome from circulating cells suggests dysregulated pathways associated with long-term recurrent events following first-time myocardial infarction.; J Mol Cell Cardiol, 74C: 13-21 PubMed link GSE48060  
Suresh, Varun et al. (2023) PRDM16 co-operates with LHX2 to shape the human brain.; bioRxiv, [no vol.]: [no pages] PubMed link GSE239855  
Suri, Deepika et al. (2014) Early stress evokes temporally distinct consequences on the hippocampal transcriptome, anxiety and cognitive behaviour.; Int J Neuropsychopharmacol, 17: 289-301 PubMed link GSE29414   GSE29412  
Suriben, Rowena et al. (2015) ?-Cell Insulin Secretion Requires the Ubiquitin Ligase COP1.; Cell, 163: 1457-67 PubMed link GSE70788  
Surles-Zeigler, Monique C et al. (2018) Transcriptomic analysis of neuregulin-1 regulated genes following ischemic stroke by computational identification of promoter binding sites: A role for the ETS-1 transcription factor.; PLoS One, 13: e0197092 PubMed link GSE103661   GSE212732  
Surrey, Verena et al. [Unknown date]Impaired Local Translation of ?-actin mRNA in Ighmbp2-Deficient Motoneurons: Implications for Spinal Muscular Atrophy with respiratory Distress (SMARD1).; Neuroscience, 386: 24-40 PubMed link GSE111224  
Susanto, Teodorus Theo et al. (2024) RAPIDASH: Tag-free enrichment of ribosome-associated proteins reveals composition dynamics in embryonic tissue, cancer cells, and macrophages.; Mol Cell, 84: 3545-3563.e25 PubMed link GSE274188   GSE274178  
Susco, Sara G et al. (2022) Molecular convergence between Down syndrome and fragile X syndrome identified using human pluripotent stem cell models.; Cell Rep, 40: 111312 PubMed link GSE144857  
Suslov, Oleg et al. (2015) Application of an RNA amplification method for reliable single-cell transcriptome analysis.; Biotechniques, 59: 137-48 PubMed link GSE55137  
Suspène, Rodolphe et al. (2024) Disruption of deoxyribonucleotide triphosphate biosynthesis leads to RAS proto-oncogene activation and perturbation of mitochondrial metabolism.; J Biol Chem, 301: 108117 PubMed link GSE261895  
Suthapot, Praewa et al. (2022) The RNA helicases DDX5 and DDX17 facilitate neural differentiation of human pluripotent stem cells NTERA2.; Life Sci, 291: 120298 PubMed link GSE173292  
Suthar, Mehul S et al. (2013) A systems biology approach reveals that tissue tropism to West Nile virus is regulated by antiviral genes and innate immune cellular processes.; PLoS Pathog, 9: e1003168 PubMed link GSE39259  
Sutherland, Allison et al. (2011) Development and validation of a novel molecular biomarker diagnostic test for the early detection of sepsis.; Crit Care, 15: R149 PubMed link GSE28750  
Sutherland, Greg T et al. (2014) Comorbidities, confounders, and the white matter transcriptome in chronic alcoholism.; Alcohol Clin Exp Res, 38: 994-1001 PubMed link GSE53808  
Sutinen, Päivi et al. (2014) SUMOylation modulates the transcriptional activity of androgen receptor in a target gene and pathway selective manner.; Nucleic Acids Res, 42: 8310-9 PubMed link GSE54137   GSE54104  
Sutton, Gavin J et al. (2022) Comprehensive evaluation of deconvolution methods for human brain gene expression.; Nat Commun, 13: 1358 PubMed link GSE175772  
Suzich, Jon B et al. (2021) PML-NB-dependent type I interferon memory results in a restricted form of HSV latency.; EMBO Rep, [no vol.]: e52547 PubMed link GSE166738  
Suzuki, Hitoshi et al. (2011) Comprehensive analysis of alternative splicing and functionality in neuronal differentiation of P19 cells.; PLoS One, 6: e16880 PubMed link GSE23710  
Suzuki, Jun et al. (2023) Fatty acid binding protein type 7 deficiency preserves auditory function in noise-exposed mice.; Sci Rep, 13: 21494 PubMed link GSE241529  
Suzuki, Katsushi et al. (2020) Bach1 promotes muscle regeneration through repressing Smad-mediated inhibition of myoblast differentiation.; PLoS One, 15: e0236781 PubMed link GSE155097  
Suzuki, Keiichiro et al. (2010) The sensing of environmental stimuli by follicular dendritic cells promotes immunoglobulin A generation in the gut.; Immunity, 33: 71-83 PubMed link GSE19401  
Suzuki, Ryo et al. (2010) Diabetes and insulin in regulation of brain cholesterol metabolism.; Cell Metab, 12: 567-79 PubMed link GSE62013  
Suzuki, Takafumi et al. (2020) Nrf2 contributes to the weight gain of mice during space travel.; Commun Biol, 3: 496 PubMed link GSE152382  
Suzuki, Tamami et al. (2022) Manipulating histone acetylation leads to antitumor effects in hemangiosarcoma cells.; Vet Comp Oncol, 20: 805-816 PubMed link GSE200106  
Suzuki, Toru et al. (2016) Mice produced by mitotic reprogramming of sperm injected into haploid parthenogenotes.; Nat Commun, 7: 12676 PubMed link GSE60595  
Suzzi, Stefano et al. (2023) N-acetylneuraminic acid links immune exhaustion and accelerated memory deficit in diet-induced obese Alzheimer's disease mouse model.; Nat Commun, 14: 1293 PubMed link GSE198144  
Sveen, Anita et al. (2012) ColoGuidePro: a prognostic 7-gene expression signature for stage III colorectal cancer patients.; Clin Cancer Res, 18: 6001-10 PubMed link GSE30378  
Sveidahl Johansen, Olivia et al. (2021) Lipolysis drives expression of the constitutively active receptor GPR3 to induce adipose thermogenesis.; Cell, 184: 3502-3518.e33 PubMed link GSE173404   GSE173388   GSE173389   GSE173386  
Svoboda, Devon S et al. [Unknown date]Human iPSC-derived microglia assume a primary microglia-like state after transplantation into the neonatal mouse brain.; Proc Natl Acad Sci U S A, 116: 25293-25303 PubMed link GSE139192  
Svoboda, Laurie K et al. (2014) Overexpression of HOX genes is prevalent in Ewing sarcoma and is associated with altered epigenetic regulation of developmental transcription programs.; Epigenetics, 9: 1613-25 PubMed link GSE68898  
Swahari, Vijay et al. (2021) MicroRNA-29 is an essential regulator of brain maturation through regulation of CH methylation.; Cell Rep, 35: 108946 PubMed link GSE140163.2   GSE140163.1  
Swales, Nathalie et al. (2012) Plasticity of adult human pancreatic duct cells by neurogenin3-mediated reprogramming.; PLoS One, 7: e37055 PubMed link GSE30802  
Swaminathan, Jyothishmathi et al. (2022) Cross-Talk Between Histone Methyltransferases and Demethylases Regulate REST Transcription During Neurogenesis.; Front Oncol, 12: 855167 PubMed link GSE196548  
Swaminathan, Srividya et al. (2013) BACH2 mediates negative selection and p53-dependent tumor suppression at the pre-B cell receptor checkpoint.; Nat Med, 19: 1014-22 PubMed link GSE41042  
Swamy, Mahima et al. (2015) Intestinal intraepithelial lymphocyte activation promotes innate antiviral resistance.; Nat Commun, 6: 7090 PubMed link GSE63364  
Swan, Caroline et al. (2013) Identifying and testing candidate genetic polymorphisms in the irritable bowel syndrome (IBS): association with TNFSF15 and TNF?.; Gut, [no vol.]: [no pages] PubMed link GSE36701  
Swanson, Joseph M et al. (2012) Developing a gene expression model for predicting ventilator-associated pneumonia in trauma patients: a pilot study.; PLoS One, 7: e42065 PubMed link GSE30385  
Šušnjar, Urša et al. (2022) Cell environment shapes TDP-43 function with implications in neuronal and muscle disease.; Commun Biol, 5: 314 PubMed link GSE171714  
Šuštić, Tonći et al. (2020) RUNX2/CBFB modulates the response to MEK inhibitors through activation of receptor tyrosine kinases in KRAS-mutant colorectal cancer.; Transl Oncol, 13: 201-211 PubMed link GSE139169