List of all 21,870 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Reich, Kimberly A et al. (2010) Forty-eight hours of unloading and 24 h of reloading lead to changes in global gene expression patterns related to ubiquitination and oxidative stress in humans.; J Appl Physiol (1985), 109: 1404-15 |
|
GSE21496 |
| Reich, Marvin et al. (2020) Alzheimer's Risk Gene TREM2 Determines Functional Properties of New Type of Human iPSC-Derived Microglia.; Front Immunol, 11: 617860 |
|
GSE169252 GSE159108 |
| Reich, Marvin et al. (2024) Peripheral expression of brain-penetrant progranulin rescues pathologies in mouse models of frontotemporal lobar degeneration.; Sci Transl Med, 16: eadj7308 |
|
GSE260606 |
| Reichard, Julia et al. (2025) DNMT1-mediated regulation of somatostatin-positive interneuron migration impacts cortical architecture and function.; Nat Commun, 16: 6834 |
|
GSE300332 GSE276516 |
| Reichert, Maximilian et al. (2013) The Prrx1 homeodomain transcription factor plays a central role in pancreatic regeneration and carcinogenesis.; Genes Dev, 27: 288-300 |
|
GSE40895 |
| Reichlmeir, Marina et al. (2023) In Cerebellar Atrophy of 12-Month-Old ATM-Null Mice, Transcriptome Upregulations Concern Most Neurotransmission and Neuropeptide Pathways, While Downregulations Affect Prominently Itpr1, Usp2 and Non-Coding RNA.; Cells, 12: [no pages] |
|
GSE241955 |
| Reifenberger, Guido et al. (2014) Molecular characterization of long-term survivors of glioblastoma using genome- and transcriptome-wide profiling.; Int J Cancer, [no vol.]: [no pages] |
|
GSE53733 |
| Reiff, C et al. (2009) Balancing inflammatory, lipid, and xenobiotic signaling pathways by VSL#3, a biotherapeutic agent, in the treatment of inflammatory bowel disease.; Inflamm Bowel Dis, 15: 1721-36 |
|
GSE13819 |
| Reikvam, Dag Henrik et al. (2012) Epithelial-microbial crosstalk in polymeric Ig receptor deficient mice.; Eur J Immunol, 42: 2959-70 |
|
GSE34630 |
| Reikvam, Håkon et al. (2017) Disease-stabilizing treatment based on all-trans retinoic acid and valproic acid in acute myeloid leukemia - identification of responders by gene expression profiling of pretreatment leukemic cells.; BMC Cancer, 17: 630 |
|
GSE106096 |
| Reimann, Maurice et al. (2021) Adaptive T-cell immunity controls senescence-prone MyD88- or CARD11-mutant B-cell lymphomas.; Blood, 137: 2785-2799 |
|
GSE141453 |
| Rein, Benjamin et al. (2020) Reversal of synaptic and behavioral deficits in a 16p11.2 duplication mouse model via restoration of the GABA synapse regulator Npas4.; Mol Psychiatry, [no vol.]: [no pages] |
|
GSE155131 |
| Reineke, Erin L et al. (2012) SRC-2 coactivator deficiency decreases functional reserve in response to pressure overload of mouse heart.; PLoS One, 7: e53395 |
|
GSE41558 |
| Reinhard, Jacqueline et al. (2024) Neural extracellular matrix regulates visual sensory motor integration.; iScience, 27: 108846 |
|
GSE230425 |
| Reinhardt, Peter et al. (2013) Genetic correction of a LRRK2 mutation in human iPSCs links parkinsonian neurodegeneration to ERK-dependent changes in gene expression.; Cell Stem Cell, 12: 354-67 |
|
GSE43364 |
| Reinhart, Jennifer M et al. (2018) RNA expression profiling in sulfamethoxazole-treated patients with a range of in vitro lymphocyte cytotoxicity phenotypes.; Pharmacol Res Perspect, 6: e00388 |
|
GSE100443 |
| Reinhart, V L et al. (2014) Downstream effects of striatal-enriched protein tyrosine phosphatase reduction on RNA expression in vivo and in vitro.; Neuroscience, 278: 62-9 |
|
GSE51678 |
| Reinhold, Colette et al. (2024) Gene-environment interaction elicits dystonia-like features and impaired translational regulation in a DYT-TOR1A mouse model.; Neurobiol Dis, 193: 106453 |
|
GSE249875 |
| Reinhold, Colette et al. (2025) Peripheral nerve injury induces dystonia-like movements and dysregulation in the energy metabolism: A multi-omics descriptive study in Thap1+/-mice.; Neurobiol Dis, 205: 106783 |
|
GSE273220 |
| Reinhold, William C et al. (2010) Exon array analyses across the NCI-60 reveal potential regulation of TOP1 by transcription pausing at guanosine quartets in the first intron.; Cancer Res, 70: 2191-203 |
|
GSE29682 |
| Reinhold, William C et al. (2010) Multifactorial regulation of E-cadherin expression: an integrative study.; Mol Cancer Ther, 9: 1-16 |
|
GSE5949 |
| Reinholz, Monica M et al. (2010) Expression profiling of formalin-fixed paraffin-embedded primary breast tumors using cancer-specific and whole genome gene panels on the DASL® platform.; BMC Med Genomics, 3: 60 |
|
GSE25233 |
| Reinisch, Isabel et al. (2024) Adipocyte p53 coordinates the response to intermittent fasting by regulating adipose tissue immune cell landscape.; Nat Commun, 15: 1391 |
|
GSE248893 |
| Reischl, Joachim et al. (2007) Increased expression of Wnt5a in psoriatic plaques.; J Invest Dermatol, 127: 163-9 |
|
GSE6710 |
| Reisinger, Sonali N et al. (2020) STAT3 in the dorsal raphe gates behavioural reactivity and regulates gene networks associated with psychopathology.; Mol Psychiatry, [no vol.]: [no pages] |
|
GSE146101 |
| Reisländer, Timo et al. (2019) BRCA2 abrogation triggers innate immune responses potentiated by treatment with PARP inhibitors.; Nat Commun, 10: 3143 |
|
GSE123631 |
| Reiter, Elke et al. (2007) Anti-inflammatory properties of alpha- and gamma-tocopherol.; Mol Aspects Med, 28: 668-91 |
|
GSE8150 GSE8146 |
| Reitsema, Rosanne D et al. (2022) Phenotypic, transcriptomic and functional profiling reveal reduced activation thresholds of CD8+ T cells in giant cell arteritis.; Rheumatology (Oxford), 62: 417-427 |
|
GSE198891 |
| Reizel, Yitzhak et al. (2015) Gender-specific postnatal demethylation and establishment of epigenetic memory.; Genes Dev, 29: 923-33 |
|
GSE60012.1 |
| Rekaik, Hocine et al. (2015) Engrailed Homeoprotein Protects Mesencephalic Dopaminergic Neurons from Oxidative Stress.; Cell Rep, 13: 242-50 |
|
GSE72321 |
| Rekers, N V et al. (2013) Increased metallothionein expression reflects steroid resistance in renal allograft recipients.; Am J Transplant, 13: 2106-18 |
|
GSE47097 |
| Rellick, Stephanie L et al. (2012) Bone marrow osteoblast damage by chemotherapeutic agents.; PLoS One, 7: e30758 |
|
GSE17839 |
| Relógio, Angela et al. (2014) Ras-mediated deregulation of the circadian clock in cancer.; PLoS Genet, 10: e1004338 |
|
GSE46549 |
| Remesal, Laura et al. (2025) Targeting iron-associated protein Ftl1 in the brain of old mice improves age-related cognitive impairment.; Nat Aging, 5: 1957-1969 |
|
GSE249105.2 GSE249105.3 GSE249105.1 |
| Rempel, Hans et al. (2010) Interferon-alpha drives monocyte gene expression in chronic unsuppressed HIV-1 infection.; AIDS, 24: 1415-23 |
|
GSE18464 |
| Rempel, Hans et al. (2013) Monocyte activation in HIV/HCV coinfection correlates with cognitive impairment.; PLoS One, 8: e55776 |
|
GSE38542 |
| Remsik, Jan et al. (2023) Leptomeningeal anti-tumor immunity follows unique signaling principles.; bioRxiv, [no vol.]: [no pages] |
|
GSE221358 |
| Remy, Janina et al. (2022) STAT3 Enhances Sensitivity of Glioblastoma to Drug-Induced Autophagy-Dependent Cell Death.; Cancers (Basel), 14: [no pages] |
|
GSE162429 |
| Remy, Sylvie et al. (2013) Gene expressions changes in bronchial epithelial cells: Markers for respiratory sensitizers and exploration of the NRF2 pathway.; Toxicol In Vitro, [no vol.]: [no pages] |
|
GSE44729 |
| Ren, Baoyin et al. (2025) Transcriptomic and Metabolomic Signatures of Acute Circadian Misalignment in Mice.; J Pineal Res, 77: e70075 |
|
GSE299370 |
| Ren, Bo et al. (2021) Methionine restriction alleviates age-associated cognitive decline via fibroblast growth factor 21.; Redox Biol, 41: 101940 |
|
GSE164097 |
| Ren, Chunyan et al. (2018) Spatially constrained tandem bromodomain inhibition bolsters sustained repression of BRD4 transcriptional activity for TNBC cell growth.; Proc Natl Acad Sci U S A, 115: 7949-7954 |
|
GSE115550 |
| Ren, Da et al. (2024) Retinoblastoma-associated protein is important for TRIM24-mediated activation of the mTOR signaling pathway through DUSP2 action in prostate cancer.; Cell Death Differ, 31: 592-604 |
|
GSE237930 |
| Ren, He et al. (2025) Chronic sleep deprivation promotes experimental autoimmune uveitis through STAT1 phosphorylation, ISG15 expression and enhanced pathogenicity of macrophages.; Int Immunopharmacol, 154: 114556 |
|
GSE284505 |
| Ren, Heather M et al. (2020) IL-21 from high-affinity CD4 T cells drives differentiation of brain-resident CD8 T cells during persistent viral infection.; Sci Immunol, 5: [no pages] |
|
GSE225462 GSE208537 |
| Ren, Jiangong et al. (2021) Qki is an essential regulator of microglial phagocytosis in demyelination.; J Exp Med, 218: [no pages] |
|
GSE121223 |
| Ren, Jiaqiang et al. (2013) Intra-subject variability in human bone marrow stromal cell (BMSC) replicative senescence: molecular changes associated with BMSC senescence.; Stem Cell Res, 11: 1060-73 |
|
GSE34303 |
| Ren, Jing et al. (2025) Gut microbiota regulates innate anxiety through neural activity of medial prefrontal cortex in male mice.; Front Neurosci, 19: 1599818 |
|
GSE290997 |
| Ren, Lei et al. (2025) Sensory neurons drive pancreatic cancer progression through glutamatergic neuron-cancer pseudo-synapses.; Cancer Cell, 43: 2241-2258.e8 |
|
GSE291933 |
| Ren, Ming et al. (2020) KCNH2-3.1 mediates aberrant complement activation and impaired hippocampal-medial prefrontal circuitry associated with working memory deficits.; Mol Psychiatry, 25: 206-229 |
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GSE118989 |
| Ren, Qianxu et al. (2024) The Effects of Ketogenic Diet on Brain Gene Expressions in Type 2 Diabetes Background.; Neuroscience, 549: 101-109 |
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GSE249467 |
| Ren, Shimin et al. (2025) Androgens alleviate the depression-like phenotype in female mice by inhibiting AVPR1a in the hippocampal brain region.; Mol Med, 31: 210 |
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GSE276198 |
| Ren, Xuefeng et al. (2008) Comparative genomics of susceptibility to mammary carcinogenesis among inbred rat strains: role of reduced prolactin signaling in resistance of the Copenhagen strain.; Carcinogenesis, 29: 177-85 |
|
GSE2581 |
| Ren, Yonggang et al. (2023) NFE2L3 drives hepatocellular carcinoma cell proliferation by regulating the proteasome-dependent degradation of ISGylated p53.; Cancer Sci, 114: 3523-3536 |
|
GSE210803 |
| Renaud, Guillaume et al. (2013) Sparing of muscle mass and function by passive loading in an experimental intensive care unit model.; J Physiol, 591: 1385-402 |
|
GSE37944 |
| Renaud, Helen J et al. (2014) Effect of diet on expression of genes involved in lipid metabolism, oxidative stress, and inflammation in mouse liver-insights into mechanisms of hepatic steatosis.; PLoS One, 9: e88584 |
|
GSE51885 |
| Renaud, Helen J et al. (2014) Ontogeny of hepatic energy metabolism genes in mice as revealed by RNA-sequencing.; PLoS One, 9: e104560 |
|
GSE58827 |
| Renauer, Paul et al. (2023) Immunogenetic metabolomics revealed key enzymes that modulate CAR-T metabolism and function.; bioRxiv, [no vol.]: [no pages] |
|
GSE225184 |
| Renault, Valérie M et al. (2009) FoxO3 regulates neural stem cell homeostasis.; Cell Stem Cell, 5: 527-39 |
|
GSE18326 |
| Renault-Mihara, Francois et al. (2011) Beneficial compaction of spinal cord lesion by migrating astrocytes through glycogen synthase kinase-3 inhibition.; EMBO Mol Med, 3: 682-96 |
|
GSE25770 |
| Rengifo Rojas, Cecilia et al. (2024) Biallelic non-productive enhancer-promoter interactions precede imprinted expression of Kcnk9 during mouse neural commitment.; HGG Adv, 5: 100271 |
|
GSE244146 |
| Renthal, William et al. (2007) Histone deacetylase 5 epigenetically controls behavioral adaptations to chronic emotional stimuli.; Neuron, 56: 517-29 |
|
GSE9134 |
| Repunte-Canonigo, Vez et al. (2015) Identifying candidate drivers of alcohol dependence-induced excessive drinking by assembly and interrogation of brain-specific regulatory networks.; Genome Biol, 16: 68 |
|
GSE60966 |
| Reshef, Ronen et al. (2017) The role of microglia and their CX3CR1 signaling in adult neurogenesis in the olfactory bulb.; Elife, 6: [no pages] |
|
GSE106857 |
| Reske, Jake J et al. (2021) Co-existing TP53 and ARID1A mutations promote aggressive endometrial tumorigenesis.; PLoS Genet, 17: e1009986 |
|
GSE167275 |
| Restaino, Anthony C et al. (2025) Tumor-infiltrating nociceptor neurons promote immunosuppression.; Sci Signal, 18: eads7889 |
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GSE300787 GSE300254 |
| Resuehr, David et al. (2019) Shift Work Disrupts Circadian Regulation of the Transcriptome in Hospital Nurses.; J Biol Rhythms, 34: 167-177 |
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GSE122541 |
| Reumann, Daniel et al. (2023) In vitro modeling of the human dopaminergic system using spatially arranged ventral midbrain-striatum-cortex assembloids.; Nat Methods, 20: 2034-2047 |
|
GSE219246 |
| Reusch, Nico et al. (2021) Cannabinoid receptor 2 is necessary to induce toll-like receptor-mediated microglial activation.; Glia, [no vol.]: [no pages] |
|
GSE173337 |
| Revet, Ingrid et al. (2010) MSX1 induces the Wnt pathway antagonist genes DKK1, DKK2, DKK3, and SFRP1 in neuroblastoma cells, but does not block Wnt3 and Wnt5A signalling to DVL3.; Cancer Lett, 289: 195-207 |
|
GSE28019 |
| Revilla-I-Domingo, Roger et al. (2012) The B-cell identity factor Pax5 regulates distinct transcriptional programmes in early and late B lymphopoiesis.; EMBO J, 31: 3130-46 |
|
GSE38046 |
| Revollo, Javier R et al. (2013) HES1 is a master regulator of glucocorticoid receptor-dependent gene expression.; Sci Signal, 6: ra103 |
|
GSE52106 |
| Rexach, Jessica E et al. (2020) Tau Pathology Drives Dementia Risk-Associated Gene Networks toward Chronic Inflammatory States and Immunosuppression.; Cell Rep, 33: 108398 |
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GSE146864 GSE146865 |
| Rexach, Jessica E et al. (2024) Cross-disorder and disease-specific pathways in dementia revealed by single-cell genomics.; Cell, 187: 5753-5774.e28 |
|
Rexach-2024.3 Rexach-2024.1 Rexach-2024.2 |
| Rey, Federica et al. (2020) Dissecting the Effect of a 3D Microscaffold on the Transcriptome of Neural Stem Cells with Computational Approaches: A Focus on Mechanotransduction.; Int J Mol Sci, 21: [no pages] |
|
GSE150767 |
| Rey, Federica et al. (2021) α-Synuclein antisense transcript SNCA-AS1 regulates synapses- and aging-related genes suggesting its implication in Parkinson's disease.; Aging Cell, 20: e13504 |
|
GSE183410 GSE186255 |
| Rey, Federico E et al. (2013) Metabolic niche of a prominent sulfate-reducing human gut bacterium.; Proc Natl Acad Sci U S A, 110: 13582-7 |
|
GSE48808 |
| Reyes, Niradiz et al. (2002) Microarray analysis of diet-induced alterations in gene expression in the ACI rat prostate.; Eur J Cancer Prev, 11 Suppl 2: S37-42 |
|
GSE79349 |
| Reyes, Teresa M et al. (2003) Categorically distinct acute stressors elicit dissimilar transcriptional profiles in the paraventricular nucleus of the hypothalamus.; J Neurosci, 23: 5607-16 |
|
GSE367 |
| Reymann, Susanne et al. (2008) Transcription profiling of lung adenocarcinomas of c-myc-transgenic mice: identification of the c-myc regulatory gene network.; BMC Syst Biol, 2: 46 |
|
GSE10954 |
| Reynders, Ana et al. (2015) Analysis of cutaneous MRGPRD free nerve endings and C-LTMRs transcriptomes by RNA-sequencing.; Genom Data, 5: 132-5 |
|
GSE64091 |
| Reynier, Frederic et al. (2012) Gene expression profiles in alveolar macrophages induced by lipopolysaccharide in humans.; Mol Med, [no vol.]: [no pages] |
|
GSE40885 |
| Reynisdottir, Tinna et al. (2025) In utero rescue of neurological dysfunction in a mouse model of Wiedemann-Steiner syndrome.; JCI Insight, 10: [no pages] |
|
GSE271275 |
| Reynoso, Sequoyah et al. (2021) GIV/Girdin, a non-receptor modulator for Gαi/s, regulates spatiotemporal signaling during sperm capacitation and is required for male fertility.; Elife, 10: [no pages] |
|
GSE171704 |
| Rezaei, Ali et al. (2025) Correction of dysregulated lipid metabolism normalizes gene expression in oligodendrocytes and prolongs lifespan in female poly-GA C9orf72 mice.; Nat Commun, 16: 3442 |
|
GSE262778 |
| Rezaei-Lotfi, Saba et al. (2021) Programmed genomic instability regulates neural transdifferentiation of human brain microvascular pericytes.; Genome Biol, 22: 334 |
|
GSE187019 |
| Rezza, Amélie et al. (2016) Signaling Networks among Stem Cell Precursors, Transit-Amplifying Progenitors, and their Niche in Developing Hair Follicles.; Cell Rep, 14: 3001-18 |
|
GSE77197 |
| Rhee, Ho Sung et al. (2016) Expression of Terminal Effector Genes in Mammalian Neurons Is Maintained by a Dynamic Relay of Transient Enhancers.; Neuron, 92: 1252-1265 |
|
GSE79561 |
| Rhee, Yong-Hee et al. (2016) LIN28A enhances the therapeutic potential of cultured neural stem cells in a Parkinson's disease model.; Brain, 139: 2722-2739 |
|
GSE77851 |