List of all 16,773 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Takahashi, Kazutoshi et al. (2020) Critical Roles of Translation Initiation and RNA Uridylation in Endogenous Retroviral Expression and Neural Differentiation in Pluripotent Stem Cells.; Cell Rep, 31: 107715 |
|
GSE129429 |
| Takahashi, Masayuki et al. (2023) Insulin receptor expression to predict resistance to axitinib and elucidation of the underlying molecular mechanism in metastatic renal cell carcinoma.; Br J Cancer, [no vol.]: [no pages] |
|
GSE230698 |
| Takahashi, Shoko et al. (2011) Mild caloric restriction up-regulates the expression of prohibitin: a proteome study.; Biochem Biophys Res Commun, 405: 462-7 |
|
GSE18297 |
| Takahashi, Takehiro et al. (2022) LINE-1 activation in the cerebellum drives ataxia.; Neuron, 110: 3278-3287.e8 |
|
GSE175776 |
| Takahashi, Yoko et al. (2009) A comparative analysis of genistein and daidzein in affecting lipid metabolism in rat liver.; J Clin Biochem Nutr, 44: 223-30 |
|
GSE41420 |
| Takahashi, Yoko et al. (2011) Tofu (soybean curd) lowers serum lipid levels and modulates hepatic gene expression involved in lipogenesis primarily through its protein, not isoflavone, component in rats.; J Agric Food Chem, 59: 8976-84 |
|
GSE23748 |
| Takahata, Yoshifumi et al. (2021) Smoc1 and Smoc2 regulate bone formation as downstream molecules of Runx2.; Commun Biol, 4: 1199 |
|
GSE166982 |
| Takalo, Mari et al. (2025) The protective PLCγ2-P522R variant mitigates Alzheimer's disease-associated pathologies by enhancing beneficial microglial functions.; J Neuroinflammation, 22: 64 |
|
GSE277167 |
| Takanezawa, Yuta et al. (2021) Microglial ASD-related genes are involved in oligodendrocyte differentiation.; Sci Rep, 11: 17825 |
|
GSE172014 |
| Takao, Keizo et al. (2013) Deficiency of schnurri-2, an MHC enhancer binding protein, induces mild chronic inflammation in the brain and confers molecular, neuronal, and behavioral phenotypes related to schizophrenia.; Neuropsychopharmacology, 38: 1409-25 |
|
GSE42777 GSE42775 GSE41307 |
| Takao, S et al. (2018) Targeting the vulnerability to NAD+depletion in B-cell acute lymphoblastic leukemia.; Leukemia, 32: 616-625 |
|
GSE86871 |
| Takashima, Masaru et al. (2024) Glutamate is effective in decreasing opacity formed in galactose-induced cataract model.; Sci Rep, 14: 4123 |
|
GSE227475 |
| Takashima, Seiji et al. (2013) Regulation of pluripotency in male germline stem cells by Dmrt1.; Genes Dev, 27: 1949-58 |
|
GSE43850 |
| Takashima, Shinichiro et al. (2025) Bone marrow-derived NGFR-positive dendritic cells regulate arterial remodeling.; Am J Physiol Cell Physiol, 328: C414-C428 |
|
GSE238076 |
| Takasugi, Masaki et al. (2023) CD44 correlates with longevity and enhances basal ATF6 activity and ER stress resistance.; Cell Rep, 42: 113130 |
|
GSE181404 |
| Takayama, Ken-Ichi et al. (2014) CtBP2 modulates the androgen receptor to promote prostate cancer progression.; Cancer Res, 74: 6542-53 |
|
GSE58309 |
| Takayama, Ken-ichi et al. (2015) RUNX1, an androgen- and EZH2-regulated gene, has differential roles in AR-dependent and -independent prostate cancer.; Oncotarget, 6: 2263-76 |
|
GSE62454 |
| Takayama, Ken-Ichi et al. (2024) Cooperative nuclear action of RNA-binding proteins PSF and G3BP2 to sustain neuronal cell viability is decreased in aging and dementia.; Aging Cell, 23: e14316 |
|
GSE256401 |
| Takayama, Yuzo et al. (2017) Brief exposure to small molecules allows induction of mouse embryonic fibroblasts into neural crest-like precursors.; FEBS Lett, 591: 590-602 |
|
GSE78890 |
| Takeda, Reina et al. (2020) HHEX promotes myeloid transformation in cooperation with mutant ASXL1.; Blood, 136: 1670-1684 |
|
GSE147654 |
| Takeda, Shugaku et al. (2015) Taspase1-dependent TFIIA cleavage coordinates head morphogenesis by limiting Cdkn2a locus transcription.; J Clin Invest, 125: 1203-14 |
|
GSE64533 |
| Takeda, Tomoki et al. (2012) Dioxin silences gonadotropin expression in perinatal pups by inducing histone deacetylases: a new insight into the mechanism for the imprinting of sexual immaturity by dioxin.; J Biol Chem, 287: 18440-50 |
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GSE32459 |
| Takeda, Tomoki et al. (2014) Maternal exposure to dioxin imprints sexual immaturity of the pups through fixing the status of the reduced expression of hypothalamic gonadotropin-releasing hormone.; Mol Pharmacol, 85: 74-82 |
|
GSE48100 |
| Takeichi, Takuya et al. (2021) Autoinflammatory Keratinization Disease With Hepatitis and Autism Reveals Roles for JAK1 Kinase Hyperactivity in Autoinflammation.; Front Immunol, 12: 737747 |
|
GSE163100 |
| Takeuchi, Akihide et al. (2018) Loss of Sfpq Causes Long-Gene Transcriptopathy in the Brain.; Cell Rep, 23: 1326-1341 |
|
GSE96082 GSE60238 GSE46138 |
| Takeuchi, Jun K et al. (2011) Chromatin remodelling complex dosage modulates transcription factor function in heart development.; Nat Commun, 2: 187 |
|
GSE26191 |
| Taki, Keiko et al. (2009) Microarray analysis of differentially expressed genes in the kidneys and testes of mice after long-term irradiation with low-dose-rate gamma-rays.; J Radiat Res, 50: 241-52 |
|
GSE14290 |
| Takla, Taylor N et al. (2023) A Shared Pathogenic Mechanism for Valproic Acid andSHROOM3Knockout in a Brain Organoid Model of Neural Tube Defects.; Cells, 12: [no pages] |
|
GSE232218 |
| Takouda, Jun et al. (2021) SoxE group transcription factor Sox8 promotes astrocytic differentiation of neural stem/precursor cells downstream of Nfia.; Pharmacol Res Perspect, 9: e00749 |
|
GSE164503 |
| Takuma, Ayako et al. (2017) Gene Expression Analysis of the Effect of Ischemic Infarction in Whole Blood.; Int J Mol Sci, 18: [no pages] |
|
GSE97537 |
| Talantov, Dmitri et al. (2005) Novel genes associated with malignant melanoma but not benign melanocytic lesions.; Clin Cancer Res, 11: 7234-42 |
|
GSE3189 |
| Talavera-López, Carlos et al. [Unknown date]Correction to: Transcriptomes of microglia in experimental cerebral malaria in mice in the presence and absence of Type I Interferon signaling.; BMC Res Notes, 12: 48 |
|
GSE119650 |
| Taliaferro, J Matthew et al. (2016) Distal Alternative Last Exons Localize mRNAs to Neural Projections.; Mol Cell, 61: 821-33 |
|
GSE67828 |
| Tallam, Aravind et al. (2016) Gene Regulatory Network Inference of Immunoresponsive Gene 1 (IRG1) Identifies Interferon Regulatory Factor 1 (IRF1) as Its Transcriptional Regulator in Mammalian Macrophages.; PLoS One, 11: e0149050 |
|
GSE76563.1 GSE76563.2 |
| Talluri, Bhavana et al. (2024) Adult zymosan re-exposure exacerbates the molecular alterations in the brainstem rostral ventromedial medulla of rats with early life zymosan-induced cystitis.; Neurobiol Pain, 16: 100160 |
|
GSE271334 |
| Talvio, Karo et al. (2022) ReducedLYNX1expression in transcriptome of human iPSC-derived neural progenitors modeling fragile X syndrome.; Front Cell Dev Biol, 10: 1034679 |
|
GSE216875 |
| Talwar, Shefali et al. (2006) Gene expression profiles of peripheral blood leukocytes after endotoxin challenge in humans.; Physiol Genomics, 25: 203-15 |
|
GSE3026 |
| Tam, Charmaine S et al. (2011) An early inflammatory gene profile in visceral adipose tissue in children.; Int J Pediatr Obes, 6: e360-3 |
|
GSE29718 |
| Tam, Oliver H et al. (2019) Postmortem Cortex Samples Identify Distinct Molecular Subtypes of ALS: Retrotransposon Activation, Oxidative Stress, and Activated Glia.; Cell Rep, 29: 1164-1177.e5 |
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GSE122650 GSE124439 |
| Tam, Ryan W et al. (2022) Human Pluripotent Stem Cell-Derived Medium Spiny Neuron-like Cells Exhibit Gene Desensitization.; Cells, 11: [no pages] |
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GSE195492.2 GSE195492.1 |
| Tam, Ryan W et al. (2023) Profiling transcriptomic responses of human stem cell-derived medium spiny neuron-like cells to exogenous phasic and tonic neurotransmitters.; Mol Cell Neurosci, 126: 103876 |
|
GSE236684 |
| Tam, Stephen J et al. (2012) Death receptors DR6 and TROY regulate brain vascular development.; Dev Cell, 22: 403-17 |
|
GSE35802 |
| Tam, Vivian et al. (2020) DIPPER, a spatiotemporal proteomics atlas of human intervertebral discs for exploring ageing and degeneration dynamics.; Elife, 9: [no pages] |
|
GSE147383 |
| Tam, Wai Leong et al. (2013) Protein kinase C ? is a central signaling node and therapeutic target for breast cancer stem cells.; Cancer Cell, 24: 347-64 |
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GSE43495 |
| Tam, Winnie F et al. (2008) Id1 is a common downstream target of oncogenic tyrosine kinases in leukemic cells.; Blood, 112: 1981-92 |
|
GSE11794 |
| Tamburri, Simone et al. (2020) Histone H2AK119 Mono-Ubiquitination Is Essential for Polycomb-Mediated Transcriptional Repression.; Mol Cell, 77: 840-856.e5 |
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GSE134053.2 GSE134053.1 |
| Tamez, Pamela A et al. (2011) P. falciparum modulates erythroblast cell gene expression in signaling and erythrocyte production pathways.; PLoS One, 6: e19307 |
|
GSE24849.1 |
| Tamez-Peña, Jose-Gerardo et al. (2018) Radiogenomics analysis identifies correlations of digital mammography with clinical molecular signatures in breast cancer.; PLoS One, 13: e0193871 |
|
GSE75678 |
| Tamir, Tigist Y et al. (2020) Gain-of-function genetic screen of the kinome reveals BRSK2 as an inhibitor of the NRF2 transcription factor.; J Cell Sci, 133: [no pages] |
|
GSE139135 |
| Tamming, Renee J et al. (2020) Atrx Deletion in Neurons Leads to Sexually Dimorphic Dysregulation of miR-137 and Spatial Learning and Memory Deficits.; Cell Rep, 31: 107838 |
|
GSE129975 |
| Tamoutounour, Samira et al. (2013) Origins and functional specialization of macrophages and of conventional and monocyte-derived dendritic cells in mouse skin.; Immunity, 39: 925-38 |
|
GSE49358 |
| Tamura, Kotaro et al. (2013) Gene expression analysis detected a low expression level of C1s gene in ICR-derived glomerulonephritis (ICGN) mice.; Nephron Exp Nephrol, 123: 34-45 |
|
GSE45005 |
| Tan, Brandon et al. (2022) RNAN6-methyladenosine reader YTHDC1 is essential for TGF-beta-mediated metastasis of triple negative breast cancer.; Theranostics, 12: 5727-5743 |
|
GSE193153 |
| Tan, Catherine L et al. (2021) PD-1 restraint of regulatory T cell suppressive activity is critical for immune tolerance.; J Exp Med, 218: [no pages] |
|
GSE155956 |
| Tan, Chan Lek et al. (2013) MicroRNA-128 governs neuronal excitability and motor behavior in mice.; Science, 342: 1254-8 |
|
GSE48813 |
| Tan, Chan Lek et al. (2016) Warm-Sensitive Neurons that Control Body Temperature.; Cell, 167: 47-59.e15 |
|
GSE80121 GSE80120 |
| Tan, Chee K et al. (2012) Genome-wide mapping of cystitis due to Streptococcus agalactiae and Escherichia coli in mice identifies a unique bladder transcriptome that signifies pathogen-specific antimicrobial defense against urinary tract infection.; Infect Immun, 80: 3145-60 |
|
GSE27575 |
| Tan, Ge et al. (2021) Differential expression of hydroxyurea transporters in normal and polycythemia vera hematopoietic stem and progenitor cell subpopulations.; Exp Hematol, 97: 47-56.e5 |
|
GSE145802 |
| Tan, I-Li et al. (2018) Lateral cerebellum is preferentially sensitive to high sonic hedgehog signaling and medulloblastoma formation.; Proc Natl Acad Sci U S A, 115: 3392-3397 |
|
GSE110932 |
| Tan, Jennifer Y et al. (2015) Extensive microRNA-mediated crosstalk between lncRNAs and mRNAs in mouse embryonic stem cells.; Genome Res, 25: 655-66 |
|
GSE58757 |
| Tan, Li Xuan et al. (2023) Optineurin tunes outside-in signaling to regulate lysosome biogenesis and phagocytic clearance in the retina.; Curr Biol, 33: 3805-3820.e7 |
|
GSE237292 GSE237291 |
| Tan, Liqiang et al. (2021) Positive natural selection of N6-methyladenosine on the RNAs of processed pseudogenes.; Genome Biol, 22: 180 |
|
GSE172219 |
| Tan, Meng How et al. (2013) An Oct4-Sall4-Nanog network controls developmental progression in the pre-implantation mouse embryo.; Mol Syst Biol, 9: 632 |
|
GSE42135 |
| Tan, Meng How et al. (2017) Dynamic landscape and regulation of RNA editing in mammals.; Nature, 550: 249-254 |
|
GSE87068 |
| Tan, Michelle G et al. (2010) Genome wide profiling of altered gene expression in the neocortex of Alzheimer's disease.; J Neurosci Res, 88: 1157-69 |
|
GSE37263 |
| Tan, Min Han et al. (2012) Specific kinesin expression profiles associated with taxane resistance in basal-like breast cancer.; Breast Cancer Res Treat, 131: 849-58 |
|
GSE22796 |
| Tan, Min-Han et al. (2010) Genomic expression and single-nucleotide polymorphism profiling discriminates chromophobe renal cell carcinoma and oncocytoma.; BMC Cancer, 10: 196 |
|
GSE19982 |
| Tan, Qihua et al. (2017) Generalized Correlation Coefficient for Non-Parametric Analysis of Microarray Time-Course Data.; J Integr Bioinform, 14: [no pages] |
|
GSE71996 |
| Tan, Qiumin et al. [Unknown date]Extensive cryptic splicing upon loss of RBM17 and TDP43 in neurodegeneration models.; Hum Mol Genet, 25: 5083-5093 |
|
GSE79020 |
| Tan, Si Kee et al. (2011) AP-2? regulates oestrogen receptor-mediated long-range chromatin interaction and gene transcription.; EMBO J, 30: 2569-81 |
|
GSE26740 |
| Tan, Siok-Lay et al. (2012) Essential roles of the histone methyltransferase ESET in the epigenetic control of neural progenitor cells during development.; Development, 139: 3806-16 |
|
GSE40296 |
| Tan, Stefanie Y et al. (2020) Metformin and 2-Deoxyglucose Collaboratively Suppress Human CD4+T Cell Effector Functions and Activation-Induced Metabolic Reprogramming.; J Immunol, 205: 957-967 |
|
GSE144353 |
| Tan, Tuan Zea et al. (2013) Functional genomics identifies five distinct molecular subtypes with clinical relevance and pathways for growth control in epithelial ovarian cancer.; EMBO Mol Med, [no vol.]: [no pages] |
|
GSE28724 |
| Tan, Tuan Zea et al. (2019) Analysis of gene expression signatures identifies prognostic and functionally distinct ovarian clear cell carcinoma subtypes.; EBioMedicine, 50: 203-210 |
|
GSE129617 |
| Tan, Yu-Ting et al. (2018) Respecifying human iPSC-derived blood cells into highly engraftable hematopoietic stem and progenitor cells with a single factor.; Proc Natl Acad Sci U S A, 115: 2180-2185 |
|
GSE103420 |
| Tan, Zhijia et al. (2024) Progenitor-like cells contributing to cellular heterogeneity in the nucleus pulposus are lost in intervertebral disc degeneration.; Cell Rep, 43: 114342 |
|
GSE201396 |
| Tanabe, Koji et al. (2022) Generation of functional human oligodendrocytes from dermal fibroblasts by direct lineage conversion.; Development, 149: [no pages] |
|
GSE203451 |
| Tanabe, Koji et al. [Unknown date]Transdifferentiation of human adult peripheral blood T cells into neurons.; Proc Natl Acad Sci U S A, 115: 6470-6475 |
|
GSE113804 |
| Tanabe, Kumiko et al. (2021) Changes in the gene expression in mouse astrocytes induced by pulsed radiofrequency: A preliminary study.; Neurosci Lett, 742: 135536 |
|
GSE130755 |
| Tanabe, Shihori et al. (2008) Gene expression profiling of human mesenchymal stem cells for identification of novel markers in early- and late-stage cell culture.; J Biochem, 144: 399-408 |
|
GSE7637 GSE7888 |
| Tanaka, Mitsuru et al. (2018) Seasoning ingredients in a medium-fat diet regulate lipid metabolism in peripheral tissues via the hypothalamic-pituitary axis in growing rats.; Biosci Biotechnol Biochem, 82: 497-506 |
|
GSE101127 |
| Tanaka, Miwa et al. (2014) Ewing's sarcoma precursors are highly enriched in embryonic osteochondrogenic progenitors.; J Clin Invest, 124: 3061-74 |
|
GSE32618 |
| Tanaka, Miwa et al. (2023) HEY1-NCOA2 expression modulates chondrogenic differentiation and induces mesenchymal chondrosarcoma in mice.; JCI Insight, 8: [no pages] |
|
GSE163291 |
| Tanaka, Miyako et al. (2014) Macrophage-inducible C-type lectin underlies obesity-induced adipose tissue fibrosis.; Nat Commun, 5: 4982 |
|
GSE52338 |
| Tanaka, Satomi et al. (2012) Ezh2 augments leukemogenicity by reinforcing differentiation blockage in acute myeloid leukemia.; Blood, 120: 1107-17 |
|
GSE33808 |
| Tanaka, Tomoya et al. (2020) Teriparatide relieves ovariectomy-induced hyperalgesia in rats, suggesting the involvement of functional regulation in primary sensory neurons by PTH-mediated signaling.; Sci Rep, 10: 5346 |
|
GSE121109 |
| Tanaka, Yoshiaki et al. (2014) Transcriptional regulation in pluripotent stem cells by methyl CpG-binding protein 2 (MeCP2).; Hum Mol Genet, 23: 1045-55 |
|
GSE51607 |
| Tanaka, Yosuke et al. (2012) The transcriptional programme controlled by Runx1 during early embryonic blood development.; Dev Biol, 366: 404-19 |
|
GSE29112 |
| Tanaka, Yujiro et al. (2011) Systems analysis of ATF3 in stress response and cancer reveals opposing effects on pro-apoptotic genes in p53 pathway.; PLoS One, 6: e26848 |
|
GSE18457 |