List of all 21,870 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Rizos, Helen et al. (2014) BRAF inhibitor resistance mechanisms in metastatic melanoma: spectrum and clinical impact.; Clin Cancer Res, 20: 1965-77 |
|
GSE50509 |
| Rizzardi, Lindsay F et al. (2019) Neuronal brain-region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability.; Nat Neurosci, 22: 307-316 |
|
GSE96613 |
| Rizzello, Celeste et al. (2022) Intracellular osteopontin protects from autoimmunity-driven lymphoma development inhibiting TLR9-MYD88-STAT3 signaling.; Mol Cancer, 21: 215 |
|
GSE193790 |
| Rizzi, Caterina et al. (2018) NGF steers microglia toward a neuroprotective phenotype.; Glia, 66: 1395-1416 |
|
GSE97918 |
| Rizzini, Luca et al. (2019) Cryptochromes-Mediated Inhibition of the CRL4Cop1-Complex Assembly Defines an Evolutionary Conserved Signaling Mechanism.; Curr Biol, 29: 1954-1962.e4 |
|
GSE124388 |
| Rizzo, Federica et al. (2019) Key role of SMN/SYNCRIP and RNA-Motif 7 in spinal muscular atrophy: RNA-Seq and motif analysis of human motor neurons.; Brain, 142: 276-294 |
|
GSE108094 |
| Rizzo, Federica et al. (2023) Combined RNA interference and gene replacement therapy targeting MFN2 as proof of principle for the treatment of Charcot-Marie-Tooth type 2A.; Cell Mol Life Sci, 80: 373 |
|
GSE201264 |
| Rizzo, Valerio et al. (2017) Encoding of contextual fear memory requiresde novoproteins in the prelimbic cortex.; Biol Psychiatry Cogn Neurosci Neuroimaging, 2: 158-169 |
|
GSE61529 |
| Robbins, Scott H et al. (2008) Novel insights into the relationships between dendritic cell subsets in human and mouse revealed by genome-wide expression profiling.; Genome Biol, 9: R17 |
|
GSE9810 |
| Robblee, Megan M et al. (2016) Saturated Fatty Acids Engage an IRE1?-Dependent Pathway to Activate the NLRP3 Inflammasome in Myeloid Cells.; Cell Rep, 14: 2611-23 |
|
GSE77104 |
| Robert, Stephanie M et al. (2023) The choroid plexus links innate immunity to CSF dysregulation in hydrocephalus.; Cell, 186: 764-785.e21 |
|
GSE192946.1 GSE192946.2 |
| Roberts, Chrissy h et al. (2015) Conjunctival fibrosis and the innate barriers to Chlamydia trachomatis intracellular infection: a genome wide association study.; Sci Rep, 5: 17447 |
|
GSE24383 |
| Roberts, Elizabeth S et al. (2007) Basal gene expression in male and female Sprague-Dawley rat nasal respiratory and olfactory epithelium.; Inhal Toxicol, 19: 941-9 |
|
GSE5019 |
| Roberts, Geoffrey P et al. (2019) Comparison of Human and Murine Enteroendocrine Cells by Transcriptomic and Peptidomic Profiling.; Diabetes, 68: 1062-1072 |
|
GSE114913 |
| Roberts, Lee D et al. (2011) The contrasting roles of PPAR? and PPAR? in regulating the metabolic switch between oxidation and storage of fats in white adipose tissue.; Genome Biol, 12: R75 |
|
GSE26207 |
| Robertson, Katrina Volk et al. (2024) Knockdown of microglial iron import gene, DMT1, worsens cognitive function and alters microglial transcriptional landscape in a sex-specific manner in the APP/PS1 model of Alzheimer's disease.; Res Sq, [no vol.]: [no pages] |
|
GSE269314 |
| Robertson, Keiramarie et al. (2025) Gpr37 modulates the severity of inflammation-induced GI dysmotility by regulating enteric reactive gliosis.; iScience, 28: 112885 |
|
GSE262418.3 GSE262418.1 GSE262418.2 |
| Robertson, Kevin A et al. (2016) An Interferon Regulated MicroRNA Provides Broad Cell-Intrinsic Antiviral Immunity through Multihit Host-Directed Targeting of the Sterol Pathway.; PLoS Biol, 14: e1002364 |
|
GSE63290 |
| Robin, Gaëlle et al. (2020) Longitudinal Characterization of Transcriptomic, Functional, and Morphological Features in Human iPSC-Derived Neurons and Their Application to Investigate Translational Progranulin Disease Biology.; Front Aging Neurosci, 12: 576678 |
|
GSE157573 |
| Robinson, Emily et al. (2022) A System for In Vitro Generation of Mature Murine Plasma Cells Uncovers DifferentialBlimp-1/Prdm1Promoter Usage.; J Immunol, 208: 514-525 |
|
GSE160823 |
| Robinson, Gertraud W et al. (2014) Coregulation of genetic programs by the transcription factors NFIB and STAT5.; Mol Endocrinol, 28: 758-67 |
|
GSE42878 |
| Robinson, Giles et al. (2012) Novel mutations target distinct subgroups of medulloblastoma.; Nature, [no vol.]: [no pages] |
|
GSE37418 |
| Robinson, J F et al. (2016) A genomics-based framework for identifying biomarkers of human neurodevelopmental toxicity.; Reprod Toxicol, 60: 1-10 |
|
GSE74378 |
| Robledo, Raymond F et al. (2012) Strain-specific hyperkyphosis and megaesophagus in Add1 null mice.; Genesis, 50: 882-91 |
|
GSE37098 |
| Robles, Eloy F et al. (2016) Homeobox NKX2-3 promotes marginal-zone lymphomagenesis by activating B-cell receptor signalling and shaping lymphocyte dynamics.; Nat Commun, 7: 11889 |
|
GSE49356 |
| Rocchi, Anna et al. (2016) Glycolytic-to-oxidative fiber-type switch and mTOR signaling activation are early-onset features of SBMA muscle modified by high-fat diet.; Acta Neuropathol, 132: 127-44 |
|
GSE68441 |
| Rochat, Cylia et al. (2022) Astrocyte-targeting RNA interference against mutated superoxide dismutase 1 induces motoneuron plasticity and protects fast-fatigable motor units in a mouse model of amyotrophic lateral sclerosis.; Glia, 70: 842-857 |
|
GSE148901 |
| Rochman, Mark et al. (2009) The interaction of NSBP1/HMGN5 with nucleosomes in euchromatin counteracts linker histone-mediated chromatin compaction and modulates transcription.; Mol Cell, 35: 642-56 |
|
GSE16564 |
| Rochman, Mark et al. (2011) Effects of HMGN variants on the cellular transcription profile.; Nucleic Acids Res, 39: 4076-87 |
|
GSE27546 |
| Rock, Kylie D et al. (2018) EDC IMPACT: Molecular effects of developmental FM 550 exposure in Wistar rat placenta and fetal forebrain.; Endocr Connect, 7: 305-324 |
|
GSE108965 |
| Rock, R B et al. (2005) Transcriptional response of human microglial cells to interferon-gamma.; Genes Immun, 6: 712-9 |
|
GSE1432 |
| Rocks, Devin et al. (2023) Early-life stress and ovarian hormones alter transcriptional regulation in the nucleus accumbens resulting in sex-specific responses to cocaine.; Cell Rep, 42: 113187 |
|
GSE229695 |
| Rockwell, Nathan C et al. (2021) Sex- and mutation-specific p53 gain-of-function activity in gliomagenesis.; Cancer Res Commun, 1: 148-163 |
|
GSE188709 |
| Rodarte, Kathia E et al. (2024) Neuroendocrine Differentiation in Prostate Cancer Requires ASCL1.; Cancer Res, 84: 3522-3537 |
|
GSE264598 |
| Rodenburg, Wendy et al. (2008) A framework to identify physiological responses in microarray-based gene expression studies: selection and interpretation of biologically relevant genes.; Physiol Genomics, 33: 78-90 |
|
GSE8587 |
| Rodenburg, Wendy et al. (2008) Impaired barrier function by dietary fructo-oligosaccharides (FOS) in rats is accompanied by increased colonic mitochondrial gene expression.; BMC Genomics, 9: 144 |
|
GSE5943 |
| Rodgers, Ali B et al. (2015) Transgenerational epigenetic programming via sperm microRNA recapitulates effects of paternal stress.; Proc Natl Acad Sci U S A, 112: 13699-704 |
|
GSE73574 |
| Rodgers, Joseph T et al. (2014) mTORC1 controls the adaptive transition of quiescent stem cells from G0 to G(Alert).; Nature, 510: 393-6 |
|
GSE55490 |
| Rodichkin, Alexander N et al. (2025) Cerebellar dysfunction in a mouse model of childhood-onset manganese-induced dystonia parkinsonism.; Neurobiol Dis, 216: 107115 |
|
GSE303733 |
| Rodrigues, Deivid C et al. (2020) Shifts in Ribosome Engagement Impact Key Gene Sets in Neurodevelopment and Ubiquitination in Rett Syndrome.; Cell Rep, 30: 4179-4196.e11 |
|
GSE123753.1 GSE123753.2 |
| Rodrigues, Maria F S D et al. (2014) PROX1 gene is differentially expressed in oral cancer and reduces cellular proliferation.; Medicine (Baltimore), 93: e192 |
|
GSE48265 |
| Rodrigues-Braz, Daniela et al. (2025) Mineralocorticoid receptor antagonism improves corneal integrity in a rat model of limbal stem cell deficiency.; Biomed Pharmacother, 185: 117979 |
|
GSE245468 |
| Rodriguez, Ramon M et al. (2017) Epigenetic Networks Regulate the Transcriptional Program in Memory and Terminally Differentiated CD8+ T Cells.; J Immunol, 198: 937-949 |
|
GSE83158 |
| Rodriguez-Barrueco, Ruth et al. (2015) Inhibition of the autocrine IL-6-JAK2-STAT3-calprotectin axis as targeted therapy for HR-/HER2+ breast cancers.; Genes Dev, 29: 1631-48 |
|
GSE62235 |
| Rodriguez-Barucg, Quentin et al. (2024) Environmental fluoxetine promotes skin cell proliferation and wound healing.; Environ Pollut, 362: 124952 |
|
GSE268987 |
| Rodriguez-Bravo, Veronica et al. (2018) Nuclear Pores Promote Lethal Prostate Cancer by Increasing POM121-Driven E2F1, MYC, and AR Nuclear Import.; Cell, 174: 1200-1215.e20 |
|
GSE103637 |
| Rodriguez-Fernandez, Rosa et al. (2017) Respiratory Syncytial Virus Genotypes, Host Immune Profiles, and Disease Severity in Young Children Hospitalized With Bronchiolitis.; J Infect Dis, 217: 24-34 |
|
GSE103842 |
| Rodriguez-Milla, Miguel Angel et al. (2012) Enrichment of neural-related genes in human mesenchymal stem cells from neuroblastoma patients.; Int J Mol Med, 30: 365-73 |
|
GSE35133 |
| Rodriguez-Perales, S et al. (2016) Truncated RUNX1 protein generated by a novel t(1;21)(p32;q22) chromosomal translocation impairs the proliferation and differentiation of human hematopoietic progenitors.; Oncogene, 35: 125-34 |
|
GSE48523 |
| Rodriguez-Rodriguez, Patricia et al. (2024) A cell autonomous regulator of neuronal excitability modulates tau in Alzheimer's disease vulnerable neurons.; Brain, 147: 2384-2399 |
|
GSE203365 GSE203366 |
| Rodriguez-Rodriguez, Patricia et al. (2025) Cell-type specific profiling of human entorhinal cortex at the onset of Alzheimer's disease neuropathology.; bioRxiv, [no vol.]: [no pages] |
|
GSE287652 GSE287651 |
| Rodriguez-Zabala, Maria et al. (2023) Combined GLUT1 and OXPHOS inhibition eliminates acute myeloid leukemia cells by restraining their metabolic plasticity.; Blood Adv, 7: 5382-5395 |
|
GSE209636 |
| Rodríguez, José A et al. (2011) Lethal iron deprivation induced by non-neutralizing antibodies targeting transferrin receptor 1 in malignant B cells.; Leuk Lymphoma, 52: 2169-78 |
|
GSE14754 |
| Rodríguez, Natalia et al. (2022) Gene co-expression architecture in peripheral blood in a cohort of remitted first-episode schizophrenia patients.; Schizophrenia (Heidelb), 8: 45 |
|
GSE193818 |
| Rodríguez-Hernández, Carlos J et al. (2016) Cinacalcet inhibits neuroblastoma tumor growth and upregulates cancer-testis antigens.; Oncotarget, 7: 16112-29 |
|
GSE73504 GSE73509 |
| Rodríguez-Hernández, Guillermo et al. (2021) The Second Oncogenic Hit Determines the Cell Fate ofETV6-RUNX1Positive Leukemia.; Front Cell Dev Biol, 9: 704591 |
|
GSE141112 |
| Rodríguez-Paredes, M et al. (2009) The chromatin remodeling factor CHD8 interacts with elongating RNA polymerase II and controls expression of the cyclin E2 gene.; Nucleic Acids Res, 37: 2449-60 |
|
GSE11422 |
| Rodschinka, Geraldine et al. (2025) Comparative CRISPRi screens reveal a human stem cell dependence on mRNA translation-coupled quality control.; Nat Struct Mol Biol, 32: 1932-1946 |
|
GSE246418 |
| Roe, Jae-Seok et al. (2015) BET Bromodomain Inhibition Suppresses the Function of Hematopoietic Transcription Factors in Acute Myeloid Leukemia.; Mol Cell, 58: 1028-39 |
|
GSE66068.1 |
| Roedder, Silke et al. (2013) Significance and suppression of redundant IL17 responses in acute allograft rejection by bioinformatics based drug repositioning of fenofibrate.; PLoS One, 8: e56657 |
|
GSE34437 |
| Roes, Michael V et al. (2024) A Genome Wide CRISPR Screen Reveals That HOXA9 Promotes Enzalutamide Resistance in Prostate Cancer.; Mol Cell Biol, 44: 529-542 |
|
GSE226978 |
| Roesch, Karin et al. (2012) Gene expression changes within Müller glial cells in retinitis pigmentosa.; Mol Vis, 18: 1197-214 |
|
GSE35386 |
| Roessler, Reinhard et al. (2018) JIP2 haploinsufficiency contributes to neurodevelopmental abnormalities in human pluripotent stem cell-derived neural progenitors and cortical neurons.; Life Sci Alliance, 1: e201800094 |
|
GSE90726 |
| Roethler, Ori et al. (2023) Single genomic enhancers drive experience-dependent GABAergic plasticity to maintain sensory processing in the adult cortex.; Neuron, 111: 2693-2708.e8 |
|
GSE227382 GSE227342 |
| Rogalska, Malgorzata E et al. (2023) Isoform changes of action potential regulators in the ventricles of arrhythmogenic phospholamban-R14del humanized mouse hearts.; Metabolism, 138: 155344 |
|
GSE217921 |
| Roger, Jerome E et al. (2012) Preservation of cone photoreceptors after a rapid yet transient degeneration and remodeling in cone-only Nrl-/- mouse retina.; J Neurosci, 32: 528-41 |
|
GSE33674 |
| Roger, Jerome E et al. (2014) OTX2 loss causes rod differentiation defect in CRX-associated congenital blindness.; J Clin Invest, 124: 631-43 |
|
GSE52006 |
| Rogers, Brianne B et al. (2023) MAPTexpression is mediated by long-range interactions withcis-regulatory elements.; bioRxiv, [no vol.]: [no pages] |
|
GSE228119 |
| Rogers, Brianne B et al. (2026) KOLF2.1J iTF-Microglia: A standardized platform to study microglial transcriptional regulatory networks in CNS disease.; iScience, 29: 116412 |
|
GSE299831 |
| Rogers, H A et al. (2013) The role of the WNT/?-catenin pathway in central nervous system primitive neuroectodermal tumours (CNS PNETs).; Br J Cancer, 108: 2130-41 |
|
GSE19404 |
| Rogers, Jesse D et al. (2024) High-Throughput Transcriptomics of Water Extracts Detects Reductions in Biological Activity with Water Treatment Processes.; Environ Sci Technol, 58: 2027-2037 |
|
GSE252117 |
| Rogers, Nicholas et al. (2014) Dbx1 is a direct target of SOX3 in the spinal cord.; PLoS One, 9: e95356 |
|
GSE53760 |
| Rogers, Robert S et al. (2023) Hypoxia extends lifespan and neurological function in a mouse model of aging.; PLoS Biol, 21: e3002117 |
|
GSE219203 |
| Roggan, Marie Denise et al. (2023) Unraveling astrocyte behavior in the space brain: Radiation response of primary astrocytes.; Front Public Health, 11: 1063250 |
|
GSE215383 |
| Roghanian, Ali et al. (2019) Cyclophosphamide Enhances Cancer Antibody Immunotherapy in the Resistant Bone Marrow Niche by Modulating Macrophage FcγR Expression.; Cancer Immunol Res, 7: 1876-1890 |
|
GSE135997.1 GSE135997.2 |
| Roh, Junyeop Daniel et al. (2024) Lithium normalizes ASD-related neuronal, synaptic, and behavioral phenotypes in DYRK1A-knockin mice.; Mol Psychiatry, [no vol.]: [no pages] |
|
GSE274730 |
| Rohacek, Alex M et al. (2017) ESRP1 Mutations Cause Hearing Loss due to Defects in Alternative Splicing that Disrupt Cochlear Development.; Dev Cell, 43: 318-331.e5 |
|
GSE90821 |
| Rohani, Leili et al. (2020) Stirred suspension bioreactors maintain naïve pluripotency of human pluripotent stem cells.; Commun Biol, 3: 492 |
|
GSE144656 |
| Rohban, Sara et al. (2017) The cohesin complex prevents Myc-induced replication stress.; Cell Death Dis, 8: e2956 |
|
GSE89799 |
| Rohde, David et al. (2022) Bone marrow endothelial dysfunction promotes myeloid cell expansion in cardiovascular disease.; Nat Cardiovasc Res, 1: 28-44 |
|
GSE144498 |
| Rohle, Dan et al. (2013) An inhibitor of mutant IDH1 delays growth and promotes differentiation of glioma cells.; Science, 340: 626-30 |
|
GSE45197.1 GSE45197.2 |
| Rohlwink, Ursula K et al. (2019) Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity.; Nat Commun, 10: 3767 |
|
GSE122377 |
| Rohn, Troy T et al. (2021) Fragmentation of Apolipoprotein E4 is Required for Differential Expression of Inflammation and Activation Related Genes in Microglia Cells.; Int J Neurodegener Dis, 4: [no pages] |
|
GSE173381 |
| Rohrbeck, Astrid et al. (2008) Gene expression profiling for molecular distinction and characterization of laser captured primary lung cancers.; J Transl Med, 6: 69 |
|
GSE6044 |
| Rohrbeck, Astrid et al. (2010) Toxicogenomics applied to in vitro carcinogenicity testing with Balb/c 3T3 cells revealed a gene signature predictive of chemical carcinogens.; Toxicol Sci, 118: 31-41 |
|
GSE22180 |
| Rohrberg, Julia et al. (2020) MYC Dysregulates Mitosis, Revealing Cancer Vulnerabilities.; Cell Rep, 30: 3368-3382.e7 |
|
GSE130921 |
| Rojas, Anabel et al. (2008) GATA4 is a direct transcriptional activator of cyclin D2 and Cdk4 and is required for cardiomyocyte proliferation in anterior heart field-derived myocardium.; Mol Cell Biol, 28: 5420-31 |
|
GSE9652 |
| Rojas-Canales, Darling M et al. (2024) The transcriptome of early compensatory kidney growth reveals cell and time specific responses.; iScience, 27: 110608 |
|
GSE241213 |
| Rojas-Cruz, Alexis Felipe et al. (2023) Palmitic Acid Upregulates Type I Interferon-Mediated Antiviral Response and Cholesterol Biosynthesis in Human Astrocytes.; Mol Neurobiol, 60: 4842-4854 |
|
GSE166500 |
| Röhr, Christina et al. (2013) High-throughput miRNA and mRNA sequencing of paired colorectal normal, tumor and metastasis tissues and bioinformatic modeling of miRNA-1 therapeutic applications.; PLoS One, 8: e67461 |
|
GSE46622 |