List of all 16,764 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Telese, Francesca et al. (2015) LRP8-Reelin-Regulated Neuronal Enhancer Signature Underlying Learning and Memory Formation.; Neuron, 86: 696-710 |
|
GSE66706 |
| Telpoukhovskaia, Maria A et al. (2020) Discovery of small molecules that normalize the transcriptome and enhance cysteine cathepsin activity in progranulin-deficient microglia.; Sci Rep, 10: 13688 |
|
GSE143144 |
| Telugu, B P et al. (2013) Comparison of extravillous trophoblast cells derived from human embryonic stem cells and from first trimester human placentas.; Placenta, [no vol.]: [no pages] |
|
GSE42112 |
| Teng, Da et al. (2023) Impact of Borna Disease Virus Infection on the Transcriptome of Differentiated Neuronal Cells and Its Modulation by Antiviral Treatment.; Viruses, 15: [no pages] |
|
GSE224811 |
| Teng, Peng et al. (2023) The human lncRNA GOMAFU suppresses neuronal interferon response pathways affected in neuropsychiatric diseases.; Brain Behav Immun, 112: 175-187 |
|
GSE182370 |
| Tenney, Alan P et al. [Unknown date]Etv1 Controls the Establishment of Non-overlapping Motor Innervation of Neighboring Facial Muscles during Development.; Cell Rep, 29: 437-452.e4 |
|
GSE134807 |
| Teoh, Wei Wei et al. (2015) Molecular characterization of hepatocarcinogenesis using mouse models.; Dis Model Mech, 8: 743-53 |
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GSE54054 |
| Teratani-Ota, Yusuke et al. (2016) Induction of specific neuron types by overexpression of single transcription factors.; In Vitro Cell Dev Biol Anim, 52: 961-973 |
|
GSE78949 |
| Terenzio, Marco et al. (2020) DYNLRB1 is essential for dynein mediated transport and neuronal survival.; Neurobiol Dis, 140: 104816 |
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GSE131455 |
| Terhorst, Dorothea et al. (2015) Dynamics and Transcriptomics of Skin Dendritic Cells and Macrophages in an Imiquimod-Induced, Biphasic Mouse Model of Psoriasis.; J Immunol, 195: 4953-61 |
|
GSE65309 |
| Termine, Andrea et al. (2022) Transcriptomic and Network Analyses Reveal Immune Modulation by Endocannabinoids in Approach/Avoidance Traits.; Int J Mol Sci, 23: [no pages] |
|
GSE196849 |
| Termini, Lara et al. (2008) Characterization of global transcription profile of normal and HPV-immortalized keratinocytes and their response to TNF treatment.; BMC Med Genomics, 1: 29 |
|
GSE4524 |
| Terpe, Philipp et al. (2024) The synergism of cytosolic acidosis and reduced NAD+/NADH ratio is responsible for lactic acidosis-induced vascular smooth muscle cell impairment in sepsis.; J Biomed Sci, 31: 3 |
|
GSE225884 |
| Terragna, Carolina et al. (2013) Correlation between eight-gene expression profiling and response to therapy of newly diagnosed multiple myeloma patients treated with thalidomide-dexamethasone incorporated into double autologous transplantation.; Ann Hematol, 92: 1271-80 |
|
GSE16791 |
| Terragna, Carolina et al. (2016) The genetic and genomic background of multiple myeloma patients achieving complete response after induction therapy with bortezomib, thalidomide and dexamethasone (VTD).; Oncotarget, 7: 9666-79 |
|
GSE68871 |
| Terranova, Christopher et al. (2015) Global Developmental Gene Programing Involves a Nuclear Form of Fibroblast Growth Factor Receptor-1 (FGFR1).; PLoS One, 10: e0123380 |
|
GSE65697 |
| Terrey, Markus et al. (2021) Defects in translation-dependent quality control pathways lead to convergent molecular and neurodevelopmental pathology.; Elife, 10: [no pages] |
|
GSE162556.1 |
| Terrey, Markus et al. [Unknown date]GTPBP1 resolves paused ribosomes to maintain neuronal homeostasis.; Elife, 9: [no pages] |
|
GSE157902.2 |
| Terrigno, Marco et al. (2018) Neurons Generated by Mouse ESCs with Hippocampal or Cortical Identity Display Distinct Projection Patterns When Co-transplanted in the Adult Brain.; Stem Cell Reports, 10: 1016-1029 |
|
GSE108466 |
| Tertil, Magdalena et al. [Unknown date]Glucocorticoid receptor signaling in astrocytes is required for aversive memory formation.; Transl Psychiatry, 8: 255 |
|
GSE117758 |
| Terunuma, Atsushi et al. (2014) MYC-driven accumulation of 2-hydroxyglutarate is associated with breast cancer prognosis.; J Clin Invest, 124: 398-412 |
|
GSE37751 |
| Tesar, Paul J et al. (2007) New cell lines from mouse epiblast share defining features with human embryonic stem cells.; Nature, 448: 196-9 |
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GSE7866 |
| Teske, Brian F et al. (2011) The eIF2 kinase PERK and the integrated stress response facilitate activation of ATF6 during endoplasmic reticulum stress.; Mol Biol Cell, 22: 4390-405 |
|
GSE29929 |
| Teske, Brian F et al. (2013) CHOP induces activating transcription factor 5 (ATF5) to trigger apoptosis in response to perturbations in protein homeostasis.; Mol Biol Cell, 24: 2477-90 |
|
GSE43714 GSE43713 |
| Testini, Chiara et al. (2019) Myc-dependent endothelial proliferation is controlled by phosphotyrosine 1212 in VEGF receptor-2.; EMBO Rep, 20: e47845 |
|
GSE136085 |
| Tetens, Ashley R et al. (2024) DNA methylation landscapes in DIPG reveal methylome variability that can be modified pharmacologically.; Neurooncol Adv, 6: vdae023 |
|
GSE224500 |
| Tetreault, Marie-Pier et al. (2010) Esophageal squamous cell dysplasia and delayed differentiation with deletion of krüppel-like factor 4 in murine esophagus.; Gastroenterology, 139: 171-81.e9 |
|
GSE17447 |
| Tew, Ben Yi et al. (2023) ATM-Inhibitor AZD1390 Is a Radiosensitizer for Breast Cancer CNS Metastasis.; Clin Cancer Res, 29: 4492-4503 |
|
GSE224899 |
| Tewari, Angela et al. (2014) Upregulation of MMP12 and its activity by UVA1 in human skin: potential implications for photoaging.; J Invest Dermatol, 134: 2598-2609 |
|
GSE45493 |
| Textoris, Julien et al. (2010) Sex-related differences in gene expression following Coxiella burnetii infection in mice: potential role of circadian rhythm.; PLoS One, 5: e12190 |
|
GSE21065 |
| Textoris, Julien et al. (2013) Evaluation of current and new biomarkers in severe preeclampsia: a microarray approach reveals the VSIG4 gene as a potential blood biomarker.; PLoS One, 8: e82638 |
|
GSE48424 |
| Thaben, Paul F et al. [Unknown date]Differential rhythmicity: detecting altered rhythmicity in biological data.; Bioinformatics, 32: 2800-8 |
|
GSE75523 |
| Thackaberry, E A et al. (2005) Toxicogenomic profile of 2,3,7,8-tetrachlorodibenzo-p-dioxin in the murine fetal heart: modulation of cell cycle and extracellular matrix genes.; Toxicol Sci, 88: 231-41 |
|
GSE2812 |
| Thair, Simone A et al. (2011) A single nucleotide polymorphism in NF-?B inducing kinase is associated with mortality in septic shock.; J Immunol, 186: 2321-8 |
|
GSE25543 |
| Thakur, Matthew et al. (2014) Defining the nociceptor transcriptome.; Front Mol Neurosci, 7: 87 |
|
GSE62424 |
| Thakur, Ram Krishna et al. (2014) Non-metastatic 2 (NME2)-mediated suppression of lung cancer metastasis involves transcriptional regulation of key cell adhesion factor vinculin.; Nucleic Acids Res, 42: 11589-600 |
|
GSE18182 |
| Thakurela, Sudhir et al. (2015) Dynamics and function of distal regulatory elements during neurogenesis and neuroplasticity.; Genome Res, 25: 1309-24 |
|
GSE65713 |
| Thakurela, Sudhir et al. [Unknown date]The transcriptome of mouse central nervous system myelin.; Sci Rep, 6: 25828 |
|
GSE78151 |
| Thalacker-Mercer, Anna E et al. (2007) Inadequate protein intake affects skeletal muscle transcript profiles in older humans.; Am J Clin Nutr, 85: 1344-52 |
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GSE8441 GSE9419 |
| Thalacker-Mercer, Anna et al. (2013) Cluster analysis reveals differential transcript profiles associated with resistance training-induced human skeletal muscle hypertrophy.; Physiol Genomics, [no vol.]: [no pages] |
|
GSE42507 |
| Thamilarasan, Madhan et al. (2013) Glatiramer acetate treatment effects on gene expression in monocytes of multiple sclerosis patients.; J Neuroinflammation, 10: 126 |
|
GSE42763 |
| Thangameeran, Shaik Ismail Mohammed et al. (2024) Examining Transcriptomic Alterations in Rat Models of Intracerebral Hemorrhage and Severe Intracerebral Hemorrhage.; Biomolecules, 14: [no pages] |
|
GSE264394 |
| Thankamony, Archana P et al. (2020) Targeting the Id1-Kif11 Axis in Triple-Negative Breast Cancer Using Combination Therapy.; Biomolecules, 10: [no pages] |
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GSE129858 |
| Theilhaber, Joachim et al. (2013) Gene expression profiling of a hypoxic seizure model of epilepsy suggests a role for mTOR and Wnt signaling in epileptogenesis.; PLoS One, 8: e74428 |
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GSE44903 |
| Thein, Thuzar et al. (2016) Control of lens development by Lhx2-regulated neuroretinal FGFs.; Development, 143: 3994-4002 |
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GSE87707 |
| Theisen, Emily R et al. (2019) Transcriptomic analysis functionally maps the intrinsically disordered domain of EWS/FLI and reveals novel transcriptional dependencies for oncogenesis.; Genes Cancer, 10: 21-38 |
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GSE122536 GSE122535 |
| Theken, Katherine N et al. (2019) Variability in the Analgesic Response to Ibuprofen Is Associated With Cyclooxygenase Activation in Inflammatory Pain.; Clin Pharmacol Ther, 106: 632-641 |
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GSE120596 |
| Theodorou, Vasiliki et al. (2013) GATA3 acts upstream of FOXA1 in mediating ESR1 binding by shaping enhancer accessibility.; Genome Res, [no vol.]: [no pages] |
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GSE39623 |
| Thi, Mia M et al. (2007) Fluid shear stress upregulates vascular endothelial growth factor gene expression in osteoblasts.; Ann N Y Acad Sci, 1117: 73-81 |
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GSE8117 |
| Thibault, Karine et al. (2014) Molecular mechanisms underlying the enhanced analgesic effect of oxycodone compared to morphine in chemotherapy-induced neuropathic pain.; PLoS One, 9: e91297 |
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GSE53897 |
| Thieblemont, Catherine et al. (2011) The germinal center/activated B-cell subclassification has a prognostic impact for response to salvage therapy in relapsed/refractory diffuse large B-cell lymphoma: a bio-CORAL study.; J Clin Oncol, 29: 4079-87 |
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GSE26812 |
| Thiem, Stefan et al. (2013) mTORC1 inhibition restricts inflammation-associated gastrointestinal tumorigenesis in mice.; J Clin Invest, 123: 767-81 |
|
GSE35808 |
| Thier, Marc et al. (2012) Direct conversion of fibroblasts into stably expandable neural stem cells.; Cell Stem Cell, 10: 473-9 |
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GSE36484 |
| Thieren, Laetitia et al. (2025) Astrocytic GLUT1 deletion in adult mice enhances glucose metabolism and resilience to stroke.; Nat Commun, 16: 4190 |
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GSE223687 |
| Thiersch, Markus et al. (2008) Analysis of the retinal gene expression profile after hypoxic preconditioning identifies candidate genes for neuroprotection.; BMC Genomics, 9: 73 |
|
GSE14366 |
| Thion, Morgane Sonia et al. (2018) Microbiome Influences Prenatal and Adult Microglia in a Sex-Specific Manner.; Cell, 172: 500-516.e16 |
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GSE107128 GSE108045 GSE107925 GSE107129 |
| Thirimanne, H Nayanga et al. (2024) Meningioma transcriptomic landscape demonstrates novel subtypes with regional associated biology and patient outcome.; Cell Genom, 4: 100566 |
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GSE252291 |
| Thole, Theresa M et al. (2017) Neuroblastoma cells depend on HDAC11 for mitotic cell cycle progression and survival.; Cell Death Dis, 8: e2635 |
|
GSE77080 |
| Thoma, Eva C et al. (2014) Chemical conversion of human fibroblasts into functional Schwann cells.; Stem Cell Reports, 3: 539-47 |
|
GSE59125 |
| Thomas, Alyssa L et al. (2022) Naturally-aged microglia exhibit phagocytic dysfunction accompanied by gene expression changes reflective of underlying neurologic disease.; Sci Rep, 12: 19471 |
|
GSE205803 |
| Thomas, Elizabeth A et al. (2008) The HDAC inhibitor 4b ameliorates the disease phenotype and transcriptional abnormalities in Huntington's disease transgenic mice.; Proc Natl Acad Sci U S A, 105: 15564-9 |
|
GSE26317 |
| Thomas, Elizabeth A et al. (2011) In vivo cell-autonomous transcriptional abnormalities revealed in mice expressing mutant huntingtin in striatal but not cortical neurons.; Hum Mol Genet, 20: 1049-60 |
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GSE25232 |
| Thomas, Hala Elnakat et al. (2012) mTOR inhibitors synergize on regression, reversal of gene expression, and autophagy in hepatocellular carcinoma.; Sci Transl Med, 4: 139ra84 |
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GSE37129 |
| Thomas, Monzy et al. (2010) Endoplasmic reticulum stress responses differ in meninges and associated vasculature, striatum, and parietal cortex after a neurotoxic amphetamine exposure.; Synapse, 64: 579-93 |
|
GSE23093 |
| Thomas, Russell S et al. (2007) A method to integrate benchmark dose estimates with genomic data to assess the functional effects of chemical exposure.; Toxicol Sci, [no vol.]: [no pages] |
|
GSE7002 |
| Thomas, Russell S et al. (2007) Application of genomic biomarkers to predict increased lung tumor incidence in 2-year rodent cancer bioassays.; Toxicol Sci, 97: 55-64 |
|
GSE6116 |
| Thomas, Russell S et al. (2009) Use of short-term transcriptional profiles to assess the long-term cancer-related safety of environmental and industrial chemicals.; Toxicol Sci, 112: 311-21 |
|
GSE17933 |
| Thomas, Russell S et al. (2011) Application of transcriptional benchmark dose values in quantitative cancer and noncancer risk assessment.; Toxicol Sci, 120: 194-205 |
|
GSE18858 |
| Thomas, Russell S et al. (2013) Cross-species transcriptomic analysis of mouse and rat lung exposed to chloroprene.; Toxicol Sci, 131: 629-40 |
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GSE40795.2 GSE40795.1 |
| Thomas, Tom M et al. (2021) Elevated Asparagine Biosynthesis Drives Brain Tumor Stem Cell Metabolic Plasticity and Resistance to Oxidative Stress.; Mol Cancer Res, 19: 1375-1388 |
|
GSE171163 |
| Thompson, Brian et al. (2021) Impaired GSH biosynthesis disrupts eye development, lens morphogenesis and PAX6 function.; Ocul Surf, 22: 190-203 |
|
GSE175394 |
| Thompson, Carol L et al. (2010) Molecular and anatomical signatures of sleep deprivation in the mouse brain.; Front Neurosci, 4: 165 |
|
GSE23628 |
| Thompson, Cayla A et al. (2017) GATA4 Is Sufficient to Establish Jejunal Versus Ileal Identity in the Small Intestine.; Cell Mol Gastroenterol Hepatol, 3: 422-446 |
|
GSE75870 |
| Thompson, Derick et al. (2020) The Lyme disease bacterium, Borrelia burgdorferi, stimulates an inflammatory response in human choroid plexus epithelial cells.; PLoS One, 15: e0234993 |
|
GSE153261 |
| Thompson, Derick et al. (2023) Transcriptome and methylome of the supraoptic nucleus provides insights into the age-dependent loss of neuronal plasticity.; Front Aging Neurosci, 15: 1223273 |
|
GSE231616 |
| Thompson, Dylan et al. (2010) Time course of changes in inflammatory markers during a 6-mo exercise intervention in sedentary middle-aged men: a randomized-controlled trial.; J Appl Physiol (1985), 108: 769-79 |
|
GSE12385 |
| Thompson, Eric M et al. (2024) Elucidating cellular response to treatment with viral immunotherapies in pediatric high-grade glioma and medulloblastoma.; Transl Oncol, 40: 101875 |
|
GSE233949 |
| Thoms, Julie A I et al. (2021) Disruption of a GATA2-TAL1-ERG regulatory circuit promotes erythroid transition in healthy and leukemic stem cells.; Blood, 138: 1441-1455 |
|
GSE158795 |
| Thomsen, Inesa et al. (2021) RUNX1 Regulates a Transcription Program That Affects the Dynamics of Cell Cycle Entry of Naive Resting B Cells.; J Immunol, 207: 2976-2991 |
|
GSE162702 |
| Thomson, Carolyn A et al. (2014) Peripheral inflammation is associated with remote global gene expression changes in the brain.; J Neuroinflammation, 11: 73 |
|
GSE159770 |
| Thomson, Carolyn A et al. (2018) Expression of the Atypical Chemokine Receptor ACKR4 Identifies a Novel Population of Intestinal Submucosal Fibroblasts That Preferentially Expresses Endothelial Cell Regulators.; J Immunol, 201: 215-229 |
|
GSE113665 |
| Thomson, Errol M et al. (2009) Toxicogenomic analysis of susceptibility to inhaled urban particulate matter in mice with chronic lung inflammation.; Part Fibre Toxicol, 6: 6 |
|
GSE11037 |
| Thomson, Sophie R et al. (2017) Cell-Type-Specific Translation Profiling Reveals a Novel Strategy for Treating Fragile X Syndrome.; Neuron, 95: 550-563.e5 |
|
GSE101823 |
| Thong, Kai Xin et al. (2023) Adrenaline blocks key cell cycle genes and exhibits antifibrotic and vasoconstrictor effects in glaucoma surgery.; Exp Eye Res, 233: 109561 |
|
GSE213217 |
| Thornton, Seraphim R et al. (2014) Polycomb Repressive Complex 2 regulates lineage fidelity during embryonic stem cell differentiation.; PLoS One, 9: e110498 |
|
GSE53506 |
| Thorrez, Lieven et al. (2008) Using ribosomal protein genes as reference: a tale of caution.; PLoS One, 3: e1854 |
|
GSE9954 |
| Thorrez, Lieven et al. (2011) Tissue-specific disallowance of housekeeping genes: the other face of cell differentiation.; Genome Res, 21: 95-105 |
|
GSE24940 GSE24207 |
| Thorsteinsson, Morten et al. (2012) Gene expression profiles in stages II and III colon cancers: application of a 128-gene signature.; Int J Colorectal Dis, 27: 1579-86 |
|
GSE31595 |
| Thudium, Samuel et al. (2022) Identification of a transcriptional signature found in multiple models of ASD and related disorders.; Genome Res, [no vol.]: [no pages] |
|
GSE193663 |
| Thuong, Nguyen Thuy Thuong et al. (2008) Identification of tuberculosis susceptibility genes with human macrophage gene expression profiles.; PLoS Pathog, 4: e1000229 |
|
GSE11199 |
| Thurman, Robert E et al. (2012) The accessible chromatin landscape of the human genome.; Nature, 489: 75-82 |
|
GSE17778 |
| Thümmler, Katja et al. (2019) Polarizing receptor activation dissociates fibroblast growth factor 2 mediated inhibition of myelination from its neuroprotective potential.; Acta Neuropathol Commun, 7: 212 |
|
GSE65466 |