List of all 21,870 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Sharma, Anu et al. (2005) Assessing natural variations in gene expression in humans by comparing with monozygotic twins using microarrays.; Physiol Genomics, 21: 117-23 |
|
GSE928 |
| Sharma, Arun et al. (2017) High-throughput screening of tyrosine kinase inhibitor cardiotoxicity with human induced pluripotent stem cells.; Sci Transl Med, 9: [no pages] |
|
GSE88944 |
| Sharma, Ashok et al. (2010) Hepatic gene expression profiling reveals key pathways involved in leptin-mediated weight loss in ob/ob mice.; PLoS One, 5: e12147 |
|
GSE20878 |
| Sharma, Mukesh K et al. (2007) Distinct genetic signatures among pilocytic astrocytomas relate to their brain region origin.; Cancer Res, 67: 890-900 |
|
GSE5675 GSE5582 |
| Sharma, Naomi L et al. (2013) The androgen receptor induces a distinct transcriptional program in castration-resistant prostate cancer in man.; Cancer Cell, 23: 35-47 |
|
GSE28680 |
| Sharma, Naomi L et al. (2014) The ETS family member GABPα modulates androgen receptor signalling and mediates an aggressive phenotype in prostate cancer.; Nucleic Acids Res, 42: 6256-69 |
|
GSE49083.2 GSE49083.1 |
| Sharma, Nidhi et al. (2025) In-depth patient-specific analysis of tumor heterogeneity in melanoma brain metastasis: Insights from spatial transcriptomics and multi-region bulk sequencing.; Transl Oncol, 59: 102468 |
|
GSE275731 |
| Sharma, Ruchi et al. (2021) Epithelial phenotype restoring drugs suppress macular degeneration phenotypes in an iPSC model.; Nat Commun, 12: 7293 |
|
GSE185310 |
| Sharma, Ruchira et al. (2017) Olfactory receptor accessory proteins play crucial roles in receptor function and gene choice.; Elife, 6: [no pages] |
|
GSE87694 |
| Sharma, Salil et al. (2018) Presymptomatic change in microRNAs modulates Tau pathology.; Sci Rep, 8: 9251 |
|
GSE107183 GSE107167 |
| Sharma, Srilakshmi M et al. (2009) Insights in to the pathogenesis of axial spondyloarthropathy based on gene expression profiles.; Arthritis Res Ther, 11: R168 |
|
GSE18781 |
| Sharma, Tasneem P et al. (2014) Optic nerve crush induces spatial and temporal gene expression patterns in retina and optic nerve of BALB/cJ mice.; Mol Neurodegener, 9: 14 |
|
GSE44708 GSE44707 |
| Sharma, Vinay Kumar et al. (2023) Characterization of serotonin-5-HTR1E signaling pathways and its role in cell survival.; FASEB J, 37: e22925 |
|
GSE223836 |
| Sharma, Vishakha et al. (2013) DUX4 differentially regulates transcriptomes of human rhabdomyosarcoma and mouse C2C12 cells.; PLoS One, 8: e64691 |
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GSE45854.1 GSE45854.2 |
| Sharma, Yagya V et al. (2012) Protective gene expression changes elicited by an inherited defect in photoreceptor structure.; PLoS One, 7: e31371 |
|
GSE33134 |
| Sharma-Kuinkel, Batu K et al. (2013) Host gene expression profiling and in vivo cytokine studies to characterize the role of linezolid and vancomycin in methicillin-resistant Staphylococcus aureus (MRSA) murine sepsis model.; PLoS One, 8: e60463 |
|
GSE38531 |
| Sharon, Gil et al. (2019) Human Gut Microbiota from Autism Spectrum Disorder Promote Behavioral Symptoms in Mice.; Cell, 177: 1600-1618.e17 |
|
GSE109827 |
| Sharov, Alexei A et al. (2011) Responsiveness of genes to manipulation of transcription factors in ES cells is associated with histone modifications and tissue specificity.; BMC Genomics, 12: 102 |
|
GSE19806 GSE19814 |
| Sharova, Lioudmila V et al. (2009) Database for mRNA half-life of 19 977 genes obtained by DNA microarray analysis of pluripotent and differentiating mouse embryonic stem cells.; DNA Res, 16: 45-58 |
|
GSE13609 |
| Sharpe, Amanda L et al. (2022) Repeated cocaine or methamphetamine treatment alters astrocytic CRF2 and GLAST expression in the ventral midbrain.; Addict Biol, 27: e13120 |
|
GSE184497 |
| Shastri, Anjali J et al. (2014) GRA25 is a novel virulence factor of Toxoplasma gondii and influences the host immune response.; Infect Immun, 82: 2595-605 |
|
GSE56534 |
| Shats, Igor et al. (2011) Using a stem cell-based signature to guide therapeutic selection in cancer.; Cancer Res, 71: 1772-80 |
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GSE24716 GSE24578 |
| Shats, Igor et al. (2013) FOXO transcription factors control E2F1 transcriptional specificity and apoptotic function.; Cancer Res, 73: 6056-67 |
|
GSE39136 |
| Shats, Igor et al. (2020) Bacteria Boost Mammalian Host NAD Metabolism by Engaging the Deamidated Biosynthesis Pathway.; Cell Metab, 31: 564-579.e7 |
|
GSE127750 |
| Shaw, Laura A et al. (2016) Id2 reinforces TH1 differentiation and inhibits E2A to repress TFH differentiation.; Nat Immunol, 17: 834-43 |
|
GSE74854 |
| Shaw, Timothy I et al. (2021) Integrative network analysis reveals USP7 haploinsufficiency inhibits E-protein activity in pediatric T-lineage acute lymphoblastic leukemia (T-ALL).; Sci Rep, 11: 5154 |
|
GSE148522 |
| Shaykhiev, Renat et al. (2009) Smoking-dependent reprogramming of alveolar macrophage polarization: implication for pathogenesis of chronic obstructive pulmonary disease.; J Immunol, 183: 2867-83 |
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GSE13896 |
| Shcherbakov, Dimitri et al. (2021) Mitochondrial Mistranslation in Brain Provokes a Metabolic Response Which Mitigates the Age-Associated Decline in Mitochondrial Gene Expression.; Int J Mol Sci, 22: [no pages] |
|
GSE121395 |
| Shea, Jeremy M et al. (2024) MICROGLIA AGING IN THE HIPPOCAMPUS ADVANCES THROUGH INTERMEDIATE STATES THAT DRIVE INFLAMMATORY ACTIVATION AND COGNITIVE DECLINE.; bioRxiv, [no vol.]: [no pages] |
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GSE179611 GSE190007 |
| Sheahan, Timothy et al. (2014) Interferon lambda alleles predict innate antiviral immune responses and hepatitis C virus permissiveness.; Cell Host Microbe, 15: 190-202 |
|
GSE54648 |
| Shearstone, Jeffrey R et al. (2006) Accurate and precise transcriptional profiles from 50 pg of total RNA or 100 flow-sorted primary lymphocytes.; Genomics, 88: 111-21 |
|
GSE5130 |
| Sheehan, Charles J et al. (2020) Dosage-dependent requirements ofMagohfor cortical interneuron generation and survival.; Development, 147: [no pages] |
|
GSE142422 |
| Sheehan, Patrick W et al. (2024) A glial circadian gene expression atlas reveals cell type and disease-specific reprogramming in response to amyloid pathology or aging.; bioRxiv, [no vol.]: [no pages] |
|
GSE261698 |
| Sheeler, Carrie et al. (2024) Expanded ATXN1 alters transcription and calcium signaling in SCA1 human motor neurons differentiated from induced pluripotent stem cells.; Neurobiol Dis, 201: 106673 |
|
GSE267449 |
| Sheffer, Michal et al. (2009) Association of survival and disease progression with chromosomal instability: a genomic exploration of colorectal cancer.; Proc Natl Acad Sci U S A, 106: 7131-6 |
|
GSE41258 |
| Sheftel, Celeste M et al. (2022) Impact of Fluoxetine Treatment and Folic Acid Supplementation on the Mammary Gland Transcriptome During Peak Lactation.; Front Pharmacol, 13: 828735 |
|
GSE188845 |
| Shehadeh, Lina A et al. (2010) SRRM2, a potential blood biomarker revealing high alternative splicing in Parkinson's disease.; PLoS One, 5: e9104 |
|
GSE18838 |
| Shehata, M et al. (2010) Sequential gene expression profiling during treatment for identification of predictive markers and novel therapeutic targets in chronic lymphocytic leukemia.; Leukemia, 24: 2122-7 |
|
GSE15490 |
| Shehata, Mona et al. (2012) Phenotypic and functional characterisation of the luminal cell hierarchy of the mammary gland.; Breast Cancer Res, 14: R134 |
|
GSE35399 |
| Sheikh, Bilal N et al. (2020) Neural metabolic imbalance induced by MOF dysfunction triggers pericyte activation and breakdown of vasculature.; Nat Cell Biol, 22: 828-841 |
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GSE138981.2 GSE138981.1 |
| Sheikh, Muhammad Abid et al. (2023) O-GlcNAc transferase promotes glioblastoma by modulating genes responsible for cell survival, invasion, and inflammation.; J Biol Chem, 299: 105235 |
|
GSE234473 |
| Shekhar, Bipin Raj et al. (2026) Altered Neuronal Architecture in Induced Pluripotent Stem Cells-Derived Neurons from Patients with Schizophrenia HarboringCNTNAP2Deletion.; Stem Cells Dev, 35: 67-79 |
|
GSE296979 |
| Shema, Reut et al. (2015) Synthetic lethal screening in the mammalian central nervous system identifies Gpx6 as a modulator of Huntington's disease.; Proc Natl Acad Sci U S A, 112: 268-72 |
|
GSE64140 |
| Shemery, Ashely et al. (2023) RNA-sequencing Reveals Altered Gene Expression in the Ventromedial Hypothalamus Following Predator Odor Exposure.; F1000Res, 13: 648 |
|
GSE142617 |
| Shen, Chao et al. (2020) RNA Demethylase ALKBH5 Selectively Promotes Tumorigenesis and Cancer Stem Cell Self-Renewal in Acute Myeloid Leukemia.; Cell Stem Cell, 27: 64-80.e9 |
|
GSE144959 |
| Shen, Chen et al. (2015) NSD3-Short Is an Adaptor Protein that Couples BRD4 to the CHD8 Chromatin Remodeler.; Mol Cell, 60: 847-59 |
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GSE71185 |
| Shen, Chuan et al. (2011) Genetic and functional studies implicate HIF1? as a 14q kidney cancer suppressor gene.; Cancer Discov, 1: 222-35 |
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GSE27415 |
| Shen, Danmin et al. (2022) Ferroptosis in oligodendrocyte progenitor cells mediates white matter injury after hemorrhagic stroke.; Cell Death Dis, 13: 259 |
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GSE197104 |
| Shen, Jing et al. (2018) A kinome-wide RNAi screen identifies ALK as a target to sensitize neuroblastoma cells for HDAC8-inhibitor treatment.; Cell Death Differ, 25: 2053-2070 |
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GSE110817 |
| Shen, Jingjing et al. (2025) Behavioral Abnormalities, Cognitive Impairments, Synaptic Deficits, and Gene Replacement Therapy in a CRISPR Engineered Rat Model of 5p15.2 Deletion Associated With Cri du Chat Syndrome.; Adv Sci (Weinh), 12: e2415224 |
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GSE273113 |
| Shen, Kimberle et al. (2021) Multiple sclerosis risk gene Mertk is required for microglial activation and subsequent remyelination.; Cell Rep, 34: 108835 |
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GSE148677 |
| Shen, Kui et al. (2012) Cell line derived multi-gene predictor of pathologic response to neoadjuvant chemotherapy in breast cancer: a validation study on US Oncology 02-103 clinical trial.; BMC Med Genomics, 5: 51 |
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GSE42822 |
| Shen, Lei et al. (2024) Loss-of-function mutation in PRMT9 causes abnormal synapse development by dysregulation of RNA alternative splicing.; Nat Commun, 15: 2809 |
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GSE212192 |
| Shen, Mengting et al. (2022) Hepatic ARID3A facilitates liver cancer malignancy by cooperating with CEP131 to regulate an embryonic stem cell-like gene signature.; Cell Death Dis, 13: 732 |
|
GSE193726 |
| Shen, Ping et al. (2014) IL-35-producing B cells are critical regulators of immunity during autoimmune and infectious diseases.; Nature, 507: 366-70 |
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GSE35998 |
| Shen, Ping et al. (2023) Toll-like receptors control the accumulation of neutrophils in lymph nodes that expand CD4+T cells during experimental autoimmune encephalomyelitis.; Eur J Immunol, 53: e2250059 |
|
GSE205600 |
| Shen, Qian et al. (2025) TCF1 and LEF1 promote B-1a cell homeostasis and regulatory function.; Nature, 646: 442-451 |
|
GSE290505 |
| Shen, Shanwei et al. (2024) The Human Intermediate Prolactin Receptor I-tail Contributes Breast Oncogenesis by Targeting Ras/MAPK Pathway.; Endocrinology, 165: [no pages] |
|
GSE244514 |
| Shen, Susan Q et al. (2014) Hybrid mice reveal parent-of-origin and Cis- and trans-regulatory effects in the retina.; PLoS One, 9: e109382 |
|
GSE60545 |
| Shen, Susan Q. et al. (2019) A candidate causal variant underlying both enhanced cognitive performance and increased risk of bipolar disorder; bioRxiv, [no vol.]: [no pages] |
|
GSE117877 |
| Shen, Ting et al. (2025) Protein arginine methyltransferase 7 linked to schizophrenia through regulation of neural progenitor cell proliferation and differentiation.; Cell Rep, 44: 115279 |
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GSE266062 GSE284672 |
| Shen, Xianli et al. (2022) Definition of a mouse microglial subset that regulates neuronal development and proinflammatory responses in the brain.; Proc Natl Acad Sci U S A, 119: [no pages] |
|
GSE190713 |
| Shen, Xiaohua et al. (2008) EZH1 mediates methylation on histone H3 lysine 27 and complements EZH2 in maintaining stem cell identity and executing pluripotency.; Mol Cell, 32: 491-502 |
|
GSE12982 |
| Shen, Xiaohua et al. (2009) Jumonji modulates polycomb activity and self-renewal versus differentiation of stem cells.; Cell, 139: 1303-14 |
|
GSE19165 |
| Shen, Yin et al. (2012) A map of the cis-regulatory sequences in the mouse genome.; Nature, 488: 116-20 |
|
GSE29278 |
| Shen, Ying et al. (2015) ASSIGN: context-specific genomic profiling of multiple heterogeneous biological pathways.; Bioinformatics, 31: 1745-53 |
|
GSE59765 |
| Shen, Ying et al. (2020) Reduction of Liver Metastasis Stiffness Improves Response to Bevacizumab in Metastatic Colorectal Cancer.; Cancer Cell, 37: 800-817.e7 |
|
GSE145429 |
| Shen, Yuntian et al. (2021) Activation of the ATF6 (Activating Transcription Factor 6) Signaling Pathway in Neurons Improves Outcome After Cardiac Arrest in Mice.; J Am Heart Assoc, 10: e020216 |
|
GSE160259 |
| Shen, Ziyi et al. (2024) Neuromolecular and behavioral effects of cannabidiol on depressive-associated behaviors and neuropathic pain conditions in mice.; Neuropharmacology, 261: 110153 |
|
GSE262952 |
| Shen, Zuolian et al. (2024) Oct4 redox sensitivity potentiates reprogramming and differentiation.; Genes Dev, 38: 308-321 |
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GSE241332 |
| Shen-Orr, Shai S et al. (2010) Cell type-specific gene expression differences in complex tissues.; Nat Methods, 7: 287-9 |
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GSE19830 GSE20300 |
| Sheng, Chao et al. (2018) A stably self-renewing adult blood-derived induced neural stem cell exhibiting patternability and epigenetic rejuvenation.; Nat Commun, 9: 4047 |
|
GSE90129 |
| Sheng, Kit-Yeng et al. (2022) A region-dependent allele-biased expression of Dopa decarboxylase in mouse brain.; Front Cell Dev Biol, 10: 1078927 |
|
GSE171581 |
| Sheng, Y et al. (2016) Activation of wnt/β-catenin signaling blocks monocyte-macrophage differentiation through antagonizing PU.1-targeted gene transcription.; Leukemia, 30: 2106-2109 |
|
GSE79932 |
| Sheng, Yue et al. (2021) Role of c-Myc haploinsufficiency in the maintenance of HSCs in mice.; Blood, 137: 610-623 |
|
GSE156361 |
| Shenoy, Archana et al. (2015) Let-7 and miR-125 cooperate to prime progenitors for astrogliogenesis.; EMBO J, 34: 1180-94 |
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GSE64637 |
| Sheppard, Karen E et al. (2013) Synergistic inhibition of ovarian cancer cell growth by combining selective PI3K/mTOR and RAS/ERK pathway inhibitors.; Eur J Cancer, 49: 3936-44 |
|
GSE43765 |
| Sheppard, Sarah E et al. (2023) Mechanism of KMT5B haploinsufficiency in neurodevelopment in humans and mice.; Sci Adv, 9: eade1463 |
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GSE184953 |
| Sheridan, Julie M et al. (2015) A pooled shRNA screen for regulators of primary mammary stem and progenitor cells identifies roles for Asap1 and Prox1.; BMC Cancer, 15: 221 |
|
GSE63310 |
| Sherman, Mara H et al. (2014) Vitamin D receptor-mediated stromal reprogramming suppresses pancreatitis and enhances pancreatic cancer therapy.; Cell, 159: 80-93 |
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GSE43770.1 GSE43770.2 |
| Sherpa, Mingma Thsering et al. (2021) Has2Regulates the Development of Ovalbumin-Induced Airway Remodeling and Steroid Insensitivity in Mice.; Front Immunol, 12: 770305 |
|
GSE181966 |
| Sherwood, Richard I et al. (2009) Transcriptional dynamics of endodermal organ formation.; Dev Dyn, 238: 29-42 |
|
GSE13040 |
| Sheth, S S et al. (2006) Hepatocellular carcinoma in Txnip-deficient mice.; Oncogene, 25: 3528-36 |
|
GSE2127 |
| Shetty, Ranjit S et al. (2005) Transcriptional changes during neuronal death and replacement in the olfactory epithelium.; Mol Cell Neurosci, 30: 90-107 |
|
GSE2437 |
| Sheu, J J-C et al. (2013) LRIG1 modulates aggressiveness of head and neck cancers by regulating EGFR-MAPK-SPHK1 signaling and extracellular matrix remodeling.; Oncogene, [no vol.]: [no pages] |
|
GSE37991 |
| Shi, Charlie Y et al. (2023) ZSWIM8 destabilizes many murine microRNAs and is required for proper embryonic growth and development.; Genome Res, 33: 1482-1496 |
|
GSE231447 |
| Shi, Chengzhang et al. (2020) BRD4 as a therapeutic target for nonfunctioning and growth hormone pituitary adenoma.; Neuro Oncol, 22: 1114-1125 |
|
GSE51618 |
| Shi, Feng-Tao et al. (2017) Notch signaling is significantly suppressed in basal cell carcinomas and activation induces basal cell carcinoma cell apoptosis.; Mol Med Rep, 15: 1441-1454 |
|
GSE12542 |