List of all 16,687 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| van Leeuwen, Danitsja M et al. (2008) Genomic analysis suggests higher susceptibility of children to air pollution.; Carcinogenesis, 29: 977-83 |
|
GSE7543 |
| van Lengerich, Bettina et al. (2023) A TREM2-activating antibody with a blood-brain barrier transport vehicle enhances microglial metabolism in Alzheimer's disease models.; Nat Neurosci, 26: 416-429 |
|
GSE199154 |
| van Leuven, Sander I et al. (2010) Mycophenolate mofetil attenuates plaque inflammation in patients with symptomatic carotid artery stenosis.; Atherosclerosis, 211: 231-6 |
|
GSE13922 |
| van Lierop, Pieter P E et al. (2013) Gene expression analysis of peripheral cells for subclassification of pediatric inflammatory bowel disease in remission.; PLoS One, 8: e79549 |
|
GSE33943 |
| Van Loo, Peter et al. (2010) T-cell/histiocyte-rich large B-cell lymphoma shows transcriptional features suggestive of a tolerogenic host immune response.; Haematologica, 95: 440-8 |
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GSE7788 |
| van Lunteren, Erik et al. (2008) Contrast between cardiac left ventricle and diaphragm muscle in expression of genes involved in carbohydrate and lipid metabolism.; Respir Physiol Neurobiol, [no vol.]: [no pages] |
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GSE6943 |
| van Lunteren, Erik et al. (2013) Gene expression of sternohyoid and diaphragm muscles in type 2 diabetic rats.; BMC Endocr Disord, 13: 43 |
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GSE21791 |
| van Malenstein, Hannah et al. (2013) Long-term exposure to sorafenib of liver cancer cells induces resistance with epithelial-to-mesenchymal transition, increased invasion and risk of rebound growth.; Cancer Lett, 329: 74-83 |
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GSE62813 |
| van Montfoort, Nadine et al. (2012) Fc? receptor IIb strongly regulates Fc? receptor-facilitated T cell activation by dendritic cells.; J Immunol, 189: 92-101 |
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GSE33718 |
| van Nas, Atila et al. (2009) Elucidating the role of gonadal hormones in sexually dimorphic gene coexpression networks.; Endocrinology, 150: 1235-49 |
|
GSE13264 |
| van Nas, Atila et al. (2010) Expression quantitative trait loci: replication, tissue- and sex-specificity in mice.; Genetics, 185: 1059-68 |
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GSE11065 GSE12795 GSE12798 GSE11338 |
| van Niekerk, Erna A et al. (2022) Methods for culturing adult CNS neurons reveal a CNS conditioning effect.; Cell Rep Methods, 2: 100255 |
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GSE205486 |
| Van Nostrand, Jeanine L et al. (2020) AMPK regulation of Raptor and TSC2 mediate metformin effects on transcriptional control of anabolism and inflammation.; Genes Dev, 34: 1330-1344 |
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GSE157048 GSE157049 GSE157050 |
| Van Oekelen, Oliver et al. (2020) A phase II study of pomalidomide, daily oral cyclophosphamide, and dexamethasone in relapsed/refractory multiple myeloma.; Leuk Lymphoma, 61: 2208-2215 |
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GSE138717 |
| van Oostrom, Olivia et al. (2009) Folic acid supplementation normalizes the endothelial progenitor cell transcriptome of patients with type 1 diabetes: a case-control pilot study.; Cardiovasc Diabetol, 8: 47 |
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GSE17635 |
| van Os, Bram W et al. (2023) Hyperlipidaemia elicits an atypical, T helper 1-like CD4+T-cell response: a key role for very low-density lipoprotein.; Eur Heart J Open, 3: oead013 |
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GSE196970 GSE196971 |
| Van Otterloo, Eric et al. [Unknown date]MEMO1 drives cranial endochondral ossification and palatogenesis.; Dev Biol, 415: 278-295 |
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GSE98844 |
| Van Rechem, Capucine et al. (2020) The lysine demethylase KDM4A controls the cell-cycle expression of replicative canonical histone genes.; Biochim Biophys Acta Gene Regul Mech, 1863: 194624 |
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GSE154684 |
| van Rheenen, Wouter et al. (2018) Whole blood transcriptome analysis in amyotrophic lateral sclerosis: A biomarker study.; PLoS One, 13: e0198874 |
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GSE112680 GSE112676 |
| van Roon-Mom, Willeke M C et al. (2008) Mutant huntingtin activates Nrf2-responsive genes and impairs dopamine synthesis in a PC12 model of Huntington's disease.; BMC Mol Biol, 9: 84 |
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GSE10581 |
| van Schaik, Tom et al. (2022) Dynamic chromosomal interactions and control of heterochromatin positioning by Ki-67.; EMBO Rep, 23: e55782 |
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GSE186206 |
| van Tienen, F H J et al. (2012) Physical activity is the key determinant of skeletal muscle mitochondrial function in type 2 diabetes.; J Clin Endocrinol Metab, 97: 3261-9 |
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GSE19420 |
| Van Vlierberghe, Pieter et al. (2008) The recurrent SET-NUP214 fusion as a new HOXA activation mechanism in pediatric T-cell acute lymphoblastic leukemia.; Blood, 111: 4668-80 |
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GSE10609 |
| Van Vlierberghe, Pieter et al. (2011) ETV6 mutations in early immature human T cell leukemias.; J Exp Med, 208: 2571-9 |
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GSE33469 GSE48046 GSE33470 |
| Van Vlierberghe, Pieter et al. (2013) Prognostic relevance of integrated genetic profiling in adult T-cell acute lymphoblastic leukemia.; Blood, 122: 74-82 |
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GSE42328 |
| van Vught, Lonneke A et al. (2016) Association of diabetes and diabetes treatment with the host response in critically ill sepsis patients.; Crit Care, 20: 252 |
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GSE65682 |
| van Wageningen, Thecla A et al. (2022) Distinct gene expression in demyelinated white and grey matter areas of patients with multiple sclerosis.; Brain Commun, 4: fcac005 |
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GSE149326 |
| Van Wyngene, Lise et al. (2021) ZBTB32 performs crosstalk with the glucocorticoid receptor and is crucial in glucocorticoid responses to starvation.; iScience, 24: 102790 |
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GSE176277 |
| Van't Sant, Lisanne J et al. (2023) Gene expression changes in cerebellum induced by dietary restriction.; Front Mol Neurosci, 16: 1185665 |
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GSE228418 |
| Vance, Keith W et al. (2014) The long non-coding RNA Paupar regulates the expression of both local and distal genes.; EMBO J, 33: 296-311 |
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GSE52569 GSE52568 |
| Vancura, Patrick et al. (2021) Evidence for a dysfunction and disease-promoting role of the circadian clock in the diabetic retina.; Exp Eye Res, 211: 108751 |
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GSE151350 |
| VandenBosch, Leah S et al. (2020) Developmental changes in the accessible chromatin, transcriptome and Ascl1-binding correlate with the loss in Müller Glial regenerative potential.; Sci Rep, 10: 13615 |
|
GSE137318 |
| Vandervore, Laura V et al. (2019) TMX2 Is a Crucial Regulator of Cellular Redox State, and Its Dysfunction Causes Severe Brain Developmental Abnormalities.; Am J Hum Genet, 105: 1126-1147 |
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GSE133483 |
| VanderWall, Kirstin B et al. (2020) Retinal Ganglion Cells With a Glaucoma OPTN(E50K) Mutation Exhibit Neurodegenerative Phenotypes when Derived from Three-Dimensional Retinal Organoids.; Stem Cell Reports, 15: 52-66 |
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GSE145069 |
| Vanderwerf, Scott M et al. (2009) TLR8-dependent TNF-(alpha) overexpression in Fanconi anemia group C cells.; Blood, 114: 5290-8 |
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GSE16334 |
| Vandewalle, Jolien et al. (2021) Combined glucocorticoid resistance and hyperlactatemia contributes to lethal shock in sepsis.; Cell Metab, 33: 1763-1776.e5 |
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GSE162100 GSE160830 GSE160795 |
| Vangala, Janakiram R et al. (2020) BET Inhibitors Synergize with Carfilzomib to Induce Cell Death in Cancer Cells via Impairing Nrf1 Transcriptional Activity and Exacerbating the Unfolded Protein Response.; Biomolecules, 10: [no pages] |
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GSE144817 |
| Vangoor, Vamshidhar R et al. (2024) Compartment-specific small non-coding RNA changes and nucleolar defects in human mesial temporal lobe epilepsy.; Acta Neuropathol, 148: 61 |
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GSE269625 |
| Vanharanta, Sakari et al. (2006) Distinct expression profile in fumarate-hydratase-deficient uterine fibroids.; Hum Mol Genet, 15: 97-103 |
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GSE2152 |
| Vanharanta, Sakari et al. (2014) Loss of the multifunctional RNA-binding protein RBM47 as a source of selectable metastatic traits in breast cancer.; Elife, 3: [no pages] |
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GSE53779 |
| Vannini, Nicola et al. (2019) The NAD-Booster Nicotinamide Riboside Potently Stimulates Hematopoiesis through Increased Mitochondrial Clearance.; Cell Stem Cell, 24: 405-418.e7 |
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GSE125211 |
| VanOudenhove, Jennifer J et al. [Unknown date]Transient RUNX1 Expression during Early Mesendodermal Differentiation of hESCs Promotes Epithelial to Mesenchymal Transition through TGFB2 Signaling.; Stem Cell Reports, 7: 884-896 |
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GSE79598 |
| Vanrobaeys, Yann et al. (2023) Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation.; Nat Commun, 14: 6100 |
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GSE223066.2 |
| Vanselow, Jens et al. (2008) Expression profiling of a high-fertility mouse line by microarray analysis and qPCR.; BMC Genomics, 9: 307 |
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GSE11113 |
| Varberg, Kaela M et al. (2021) ASCL2 reciprocally controls key trophoblast lineage decisions during hemochorial placenta development.; Proc Natl Acad Sci U S A, 118: [no pages] |
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GSE154350.2 GSE154350.1 |
| Vardi, Ayelet et al. (2020) Mice defective in interferon signaling help distinguish between primary and secondary pathological pathways in a mouse model of neuronal forms of Gaucher disease.; J Neuroinflammation, 17: 265 |
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GSE150266 |
| Vardi, Ayelet et al. (2021) Proteomics analysis of a human brain sample from a mucolipidosis type IV patient reveals pathophysiological pathways.; Orphanet J Rare Dis, 16: 39 |
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GSE157825 |
| Varela-Rey, Marta et al. (2014) S-adenosylmethionine levels regulate the schwann cell DNA methylome.; Neuron, 81: 1024-1039 |
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GSE45700 GSE45701 |
| Varešlija, Damir et al. (2021) Comparative analysis of the AIB1 interactome in breast cancer reveals MTA2 as a repressive partner which silences E-Cadherin to promote EMT and associates with a pro-metastatic phenotype.; Oncogene, 40: 1318-1331 |
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GSE158095 |
| Varga, Balazs V et al. (2022) Signal requirement for cortical potential of transplantable human neuroepithelial stem cells.; Nat Commun, 13: 2844 |
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GSE185258 |
| Varga, Tamas et al. (2016) Highly Dynamic Transcriptional Signature of Distinct Macrophage Subsets during Sterile Inflammation, Resolution, and Tissue Repair.; J Immunol, 196: 4771-82 |
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GSE71152 |
| Vargas, Ana Cristina et al. (2012) Gene expression profiling of tumour epithelial and stromal compartments during breast cancer progression.; Breast Cancer Res Treat, 135: 153-65 |
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GSE35019 |
| Vargas, Marcelo R et al. (2008) Transcriptional profile of primary astrocytes expressing ALS-linked mutant SOD1.; J Neurosci Res, 86: 3515-25 |
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GSE7441 |
| Vargas-Valderrama, Alejandra et al. (2022) Endothelial and hematopoietic hPSCs differentiation via a hematoendothelial progenitor.; Stem Cell Res Ther, 13: 254 |
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GSE194372 |
| Varghese, Binny V et al. (2013) Loss of the repressor REST in uterine fibroids promotes aberrant G protein-coupled receptor 10 expression and activates mammalian target of rapamycin pathway.; Proc Natl Acad Sci U S A, 110: 2187-92 |
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GSE41386 |
| Varghese, Johnna F et al. (2024) Human regulatory memory B cells defined by expression of TIM-1 and TIGIT are dysfunctional in multiple sclerosis.; Front Immunol, 15: 1360219 |
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GSE261258 |
| Varley, Katherine E et al. (2014) Recurrent read-through fusion transcripts in breast cancer.; Breast Cancer Res Treat, 146: 287-97 |
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GSE58135 |
| Varol, Diana et al. [Unknown date]Dicer Deficiency Differentially Impacts Microglia of the Developing and Adult Brain.; Immunity, 46: 1030-1044.e8 |
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GSE98142 |
| Varshney, Mukesh K et al. (2017) Role of estrogen receptor beta in neural differentiation of mouse embryonic stem cells.; Proc Natl Acad Sci U S A, 114: E10428-E10437 |
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GSE139428 GSE103312 |
| Vartanian, Kristina et al. (2009) Gene expression profiling of whole blood: comparison of target preparation methods for accurate and reproducible microarray analysis.; BMC Genomics, 10: 2 |
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GSE13292 |
| Varum, Sandra et al. [Unknown date]Yin Yang 1 Orchestrates a Metabolic Program Required for Both Neural Crest Development and Melanoma Formation.; Cell Stem Cell, 24: 637-653.e9 |
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GSE125480 |
| Vasciaveo, Alessandro et al. (2023) OncoLoop: A Network-Based Precision Cancer Medicine Framework.; Cancer Discov, 13: 386-409 |
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GSE184427 |
| Vasek, Michael J et al. (2023) Local translation in microglial processes is required for efficient phagocytosis.; Nat Neurosci, 26: 1185-1195 |
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GSE161460 |
| Vasek, Michael J et al. [Unknown date]A complement-microglial axis drives synapse loss during virus-induced memory impairment.; Nature, 534: 538-43 |
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GSE72139 |
| Vashishtha, Malini et al. (2013) Targeting H3K4 trimethylation in Huntington disease.; Proc Natl Acad Sci U S A, 110: E3027-36 |
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GSE48962 |
| Vasilache, A M et al. (2013) Minor changes in gene expression in the mouse preoptic hypothalamic region by inflammation-induced prostaglandin E2.; J Neuroendocrinol, 25: 635-43 |
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GSE43181 |
| Vasiljevic, Alexandre et al. (2013) Molecular characterization of central neurocytomas: potential markers for tumor typing and progression.; Neuropathology, [no vol.]: [no pages] |
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GSE35499 |
| Vassallo, I et al. (2016) WIF1 re-expression in glioblastoma inhibits migration through attenuation of non-canonical WNT signaling by downregulating the lncRNA MALAT1.; Oncogene, 35: 12-21 |
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GSE58525 |
| Vassena, Rita et al. (2007) Tough beginnings: alterations in the transcriptome of cloned embryos during the first two cell cycles.; Dev Biol, 304: 75-89 |
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GSE6595 |
| Vassena, Rita et al. (2011) Waves of early transcriptional activation and pluripotency program initiation during human preimplantation development.; Development, 138: 3699-709 |
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GSE29397 |
| Vastagh, Csaba et al. (2020) Gonadal Cycle-Dependent Expression of Genes Encoding Peptide-, Growth Factor-, and Orphan G-Protein-Coupled Receptors in Gonadotropin- Releasing Hormone Neurons of Mice.; Front Mol Neurosci, 13: 594119 |
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GSE66806 |
| Vasudevan, Harish N et al. (2015) Receptor tyrosine kinases modulate distinct transcriptional programs by differential usage of intracellular pathways.; Elife, 4: [no pages] |
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GSE66484 |
| Vathipadiekal, Vinod et al. (2012) Identification of a potential ovarian cancer stem cell gene expression profile from advanced stage papillary serous ovarian cancer.; PLoS One, 7: e29079 |
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GSE33874 |
| Vatine, Gad D et al. (2019) Human iPSC-Derived Blood-Brain Barrier Chips Enable Disease Modeling and Personalized Medicine Applications.; Cell Stem Cell, 24: 995-1005.e6 |
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GSE129290 |
| Vatine, Gad D et al. [Unknown date]Modeling Psychomotor Retardation using iPSCs from MCT8-Deficient Patients Indicates a Prominent Role for the Blood-Brain Barrier.; Cell Stem Cell, 20: 831-843.e5 |
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GSE97324 |
| Vats, Abhishek et al. (2022) Nonretinoid chaperones improve rhodopsin homeostasis in a mouse model of retinitis pigmentosa.; JCI Insight, 7: [no pages] |
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GSE179754 |
| Vats, Kavita et al. (2022) Sensory Nerves Impede the Formation of Tertiary Lymphoid Structures and Development of Protective Antimelanoma Immune Responses.; Cancer Immunol Res, 10: 1141-1154 |
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GSE193065 |
| Vaughan-Jackson, Alun et al. (2021) Differentiation of human induced pluripotent stem cells to authentic macrophages using a defined, serum-free, open-source medium.; Stem Cell Reports, 16: 1735-1748 |
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GSE197865 |
| Vaughan-Shaw, Peter G et al. (2022) Vitamin D treatment induces in vitro and ex vivo transcriptomic changes indicating anti-tumor effects.; FASEB J, 36: e22082 |
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GSE181644 |
| Vawter, Marquis P et al. (2004) Gender-specific gene expression in post-mortem human brain: localization to sex chromosomes.; Neuropsychopharmacology, 29: 373-84 |
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GSE2164 |
| Vaz, Michelle et al. (2017) Chronic Cigarette Smoke-Induced Epigenomic Changes Precede Sensitization of Bronchial Epithelial Cells to Single-Step Transformation by KRAS Mutations.; Cancer Cell, 32: 360-376.e6 |
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GSE101863 GSE101862 |
| Vazquez-Chona, Felix R et al. (2005) Genetic networks controlling retinal injury.; Mol Vis, 11: 958-70 |
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GSE1928 |
| Vázquez Salgado, A M et al. (2022) In Vivo Screen Identifies Liver X Receptor Alpha Agonism Potentiates Sorafenib Killing of Hepatocellular Carcinoma.; Gastro Hep Adv, 1: 905-908 |
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GSE151412 |
| Vázquez, Ramiro et al. (2017) The bromodomain inhibitor OTX015 (MK-8628) exerts anti-tumor activity in triple-negative breast cancer models as single agent and in combination with everolimus.; Oncotarget, 8: 7598-7613 |
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GSE79721 |