List of all 16,687 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Vecsey, Christopher G et al. (2012) Genomic analysis of sleep deprivation reveals translational regulation in the hippocampus.; Physiol Genomics, 44: 981-91 |
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GSE33302 |
| Vedantham, Vasanth et al. (2015) RNA sequencing of mouse sinoatrial node reveals an upstream regulatory role for Islet-1 in cardiac pacemaker cells.; Circ Res, 116: 797-803 |
|
GSE65658 |
| Vedin, Inger et al. (2012) Effects of DHA-rich n-3 fatty acid supplementation on gene expression in blood mononuclear leukocytes: the OmegAD study.; PLoS One, 7: e35425 |
|
GSE29680 |
| Vedunova, Maria et al. (2022) DC vaccines loaded with glioma cells killed by photodynamic therapy induce Th17 anti-tumor immunity and provide a four-gene signature for glioma prognosis.; Cell Death Dis, 13: 1062 |
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GSE218081 |
| Veena, Mysore S et al. (2024) Gigaxonin Suppresses Epithelial-to-Mesenchymal Transition of Human Cancer Through Downregulation of Snail.; Cancer Res Commun, 4: 706-722 |
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GSE179424 |
| Veerapandian, Raja et al. (2023) Mycobacterium smegmatis secreting methionine sulfoxide reductase A (MsrA) modulates cellular processes in mouse macrophages.; Biochimie, 211: 1-15 |
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GSE212228 |
| Veerapandian, Veeramohan et al. (2018) Directed Evolution of Reprogramming Factors by Cell Selection and Sequencing.; Stem Cell Reports, 11: 593-606 |
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GSE107987 |
| Veeraragavan, Surabi et al. [Unknown date]Loss of MeCP2 in the rat models regression, impaired sociability and transcriptional deficits of Rett syndrome.; Hum Mol Genet, 25: 3284-3302 |
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GSE83323 |
| Vega-Avelaira, David et al. (2009) Differential regulation of immune responses and macrophage/neuron interactions in the dorsal root ganglion in young and adult rats following nerve injury.; Mol Pain, 5: 70 |
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GSE15041 |
| Vegi, Naidu M et al. [Unknown date]MEIS2 Is an Oncogenic Partner in AML1-ETO-Positive AML.; Cell Rep, 16: 498-507 |
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GSE81328 GSE81174 |
| Veiga, Diogo F T et al. (2022) MonoallelicHeb/Tcf12Deletion Reduces the Requirement for NOTCH1 Hyperactivation in T-Cell Acute Lymphoblastic Leukemia.; Front Immunol, 13: 867443 |
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GSE198506 |
| Velasco, Silvia et al. (2019) Individual brain organoids reproducibly form cell diversity of the human cerebral cortex.; Nature, 570: 523-527 |
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GSE129519 |
| Velho, Sérgia et al. (2014) Dissecting the signaling pathways associated with the oncogenic activity of MLK3 P252H mutation.; BMC Cancer, 14: 182 |
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GSE54611 |
| Veljkovic, Emilija et al. (2011) Chronic exposure to cigarette smoke condensate in vitro induces epithelial to mesenchymal transition-like changes in human bronchial epithelial cells, BEAS-2B.; Toxicol In Vitro, 25: 446-53 |
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GSE14461 |
| Velkey, J Matthew et al. (2013) Expression of Neurogenin 1 in mouse embryonic stem cells directs the differentiation of neuronal precursors and identifies unique patterns of down-stream gene expression.; Dev Dyn, 242: 230-53 |
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GSE42883 |
| Vella, Pietro et al. (2012) Yin Yang 1 extends the Myc-related transcription factors network in embryonic stem cells.; Nucleic Acids Res, 40: 3403-18 |
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GSE31784 |
| Veloso, Artur et al. (2013) Genome-wide transcriptional effects of the anti-cancer agent camptothecin.; PLoS One, 8: e78190 |
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GSE48678 |
| Veloso, Artur et al. (2014) Rate of elongation by RNA polymerase II is associated with specific gene features and epigenetic modifications.; Genome Res, 24: 896-905 |
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GSE55534 |
| Velychko, Sergiy et al. (2019) Excluding Oct4 from Yamanaka Cocktail Unleashes the Developmental Potential of iPSCs.; Cell Stem Cell, 25: 737-753.e4 |
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GSE137001 |
| Velz, Julia et al. (2025) Mapping naturally presented T cell antigens in medulloblastoma based on integrative multi-omics.; Nat Commun, 16: 1364 |
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GSE238195 |
| Velíšková, J et al. (2015) Oestradiol Regulates Neuropeptide Y Release and Gene Coupling with the GABAergic and Glutamatergic Synapses in the Adult Female Rat Dentate Gyrus.; J Neuroendocrinol, 27: 911-20 |
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GSE60013 |
| Vemuri, Kiranmayi et al. (2024) Diet-induced obesity mediated through Estrogen-Related Receptor α is independent of intestinal function.; bioRxiv, [no vol.]: [no pages] |
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GSE269825 |
| Venanzi, Emily S et al. (2008) The variable immunological self: genetic variation and nongenetic noise in Aire-regulated transcription.; Proc Natl Acad Sci U S A, 105: 15860-5 |
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GSE8564 |
| Vencken, Sebastian F et al. (2014) An integrated analysis of the SOX2 microRNA response program in human pluripotent and nullipotent stem cell lines.; BMC Genomics, 15: 711 |
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GSE59234 |
| Vendrell, Julie A et al. (2012) ZNF217 is a marker of poor prognosis in breast cancer that drives epithelial-mesenchymal transition and invasion.; Cancer Res, 72: 3593-606 |
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GSE35511 |
| Venere, Monica et al. (2012) Sox1 marks an activated neural stem/progenitor cell in the hippocampus.; Development, 139: 3938-49 |
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GSE39992 |
| Veneri, Francesca A et al. (2022) A novel mouse model of CMT1B identifies hyperglycosylation as a new pathogenetic mechanism.; Hum Mol Genet, 31: 4255-4274 |
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GSE196979 |
| Venkadakrishnan, Varadha Balaji et al. (2024) Lineage-specific canonical and non-canonical activity of EZH2 in advanced prostate cancer subtypes.; Nat Commun, 15: 6779 |
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GSE256043 |
| Venkatanarayan, Avinashnarayan et al. (2015) IAPP-driven metabolic reprogramming induces regression of p53-deficient tumours in vivo.; Nature, 517: 626-30 |
|
GSE60827 |
| Venkateswaran, Niranjan et al. (2024) Tryptophan fuels MYC-dependent liver tumorigenesis through indole 3-pyruvate synthesis.; Nat Commun, 15: 4266 |
|
GSE213377 |
| Venosa, Alessandro et al. (2021) Role of CCR2+Myeloid Cells in Inflammation Responses Driven by Expression of a Surfactant Protein-C Mutant in the Alveolar Epithelium.; Front Immunol, 12: 665818 |
|
GSE166300 |
| Venugopal, Abhilash K et al. (2012) Transcriptomic Profiling of Medial Temporal Lobe Epilepsy.; J Proteomics Bioinform, 5: [no pages] |
|
GSE25453 |
| Vera-Ramirez, Laura et al. (2013) Transcriptional shift identifies a set of genes driving breast cancer chemoresistance.; PLoS One, 8: e53983 |
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GSE28694 GSE28583 GSE28826 |
| Veras, Matthew A et al. (2019) Loss of ENT1 increases cell proliferation in the annulus fibrosus of the intervertebral disc.; J Cell Physiol, 234: 13705-13719 |
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GSE124650 |
| Verbeke, Stéphanie et al. (2023) Antitumor Effects of PRMT5 Inhibition in Sarcomas.; Cancer Res Commun, 3: 2211-2220 |
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GSE243904 |
| Verbitsky, Miguel et al. (2004) Altered hippocampal transcript profile accompanies an age-related spatial memory deficit in mice.; Learn Mem, 11: 253-60 |
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GSE5078 |
| Verdeguer, Francisco et al. (2015) Brown Adipose YY1 Deficiency Activates Expression of Secreted Proteins Linked to Energy Expenditure and Prevents Diet-Induced Obesity.; Mol Cell Biol, 36: 184-96 |
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GSE68429 GSE70562 GSE68382 |
| Verdejo-Torres, Odette et al. (2024) Cysteine Rich Intestinal Protein 2 is a copper-responsive regulator of skeletal muscle differentiation.; bioRxiv, [no vol.]: [no pages] |
|
GSE252158 |
| Verdoni, Angela M et al. (2008) Effect of destrin mutations on the gene expression profile in vivo.; Physiol Genomics, 34: 9-21 |
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GSE9743 |
| Verdugo, Ricardo A et al. (2010) Serious limitations of the QTL/microarray approach for QTL gene discovery.; BMC Biol, 8: 96 |
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GSE22042 |
| Vereide, David T et al. (2014) An expandable, inducible hemangioblast state regulated by fibroblast growth factor.; Stem Cell Reports, 3: 1043-57 |
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GSE60896 |
| Verginadis, Ioannis I et al. (2022) A stromal Integrated Stress Response activates perivascular cancer-associated fibroblasts to drive angiogenesis and tumour progression.; Nat Cell Biol, 24: 940-953 |
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GSE159017 GSE159012 |
| Verhagen, Lilly M et al. (2013) A predictive signature gene set for discriminating active from latent tuberculosis in Warao Amerindian children.; BMC Genomics, 14: 74 |
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GSE41055 |
| Verheijden, Simon et al. (2015) Identification of a chronic non-neurodegenerative microglia activation state in a mouse model of peroxisomal ?-oxidation deficiency.; Glia, 63: 1606-20 |
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GSE66420 |
| Verheyen, An et al. (2018) Genetically Engineered iPSC-Derived FTDP-17 MAPT Neurons Display Mutation-Specific Neurodegenerative and Neurodevelopmental Phenotypes.; Stem Cell Reports, 11: 363-379 |
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GSE104013 GSE106075 |
| Verhofstad, Nicole et al. (2010) Benzo(a)pyrene induces similar gene expression changes in testis of DNA repair proficient and deficient mice.; BMC Genomics, 11: 333 |
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GSE17979 |
| Verkerk, Annemieke J M H et al. (2009) Mutation in the AP4M1 gene provides a model for neuroaxonal injury in cerebral palsy.; Am J Hum Genet, 85: 40-52 |
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GSE16447 |
| Verkerke, Marloes et al. (2024) Transcriptomic and morphological maturation of human astrocytes in cerebral organoids.; Glia, 72: 362-374 |
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GSE244778 |
| Verma, Aditi et al. (2023) Genes critical for development and differentiation of dopaminergic neurons are downregulated in Parkinson's disease.; J Neural Transm (Vienna), 130: 495-512 |
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GSE206308.1 GSE206308.2 |
| Verma, Nirmal et al. (2023) Aβ efflux impairment and inflammation linked to cerebrovascular accumulation of amyloid-forming amylin secreted from pancreas.; Commun Biol, 6: 2 |
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GSE221450 |
| Verma, Ravinder et al. (2023) Olig1/2-Expressing Intermediate Lineage Progenitors Are Predisposed to PTEN/p53-Loss-Induced Gliomagenesis and Harbor Specific Therapeutic Vulnerabilities.; Cancer Res, 83: 890-905 |
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GSE200889 GSE200888 |
| Vermeij, W P et al. [Unknown date]Restricted diet delays accelerated ageing and genomic stress in DNA-repair-deficient mice.; Nature, 537: 427-431 |
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GSE77321 |
| Vermeiren, Simon et al. (2023) Prdm12 represses the expression of the visceral neuron determinants Phox2a/b in developing somatosensory ganglia.; iScience, 26: 108364 |
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GSE211929 |
| Vernet, Nadège et al. (2014) The expression of Y-linked Zfy2 in XY mouse oocytes leads to frequent meiosis 2 defects, a high incidence of subsequent early cleavage stage arrest and infertility.; Development, 141: 855-66 |
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GSE52218 |
| Vernia, Santiago et al. (2014) The PPAR?-FGF21 hormone axis contributes to metabolic regulation by the hepatic JNK signaling pathway.; Cell Metab, 20: 512-25 |
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GSE55190 |
| Verschuren, Lars et al. (2012) Systems biology analysis unravels the complementary action of combined rosuvastatin and ezetimibe therapy.; Pharmacogenet Genomics, 22: 837-45 |
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GSE38688 |
| Vershkov, Dan et al. [Unknown date]FMR1 Reactivating Treatments in Fragile X iPSC-Derived Neural Progenitors In Vitro and In Vivo.; Cell Rep, 26: 2531-2539.e4 |
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GSE112145 |
| Vervoort, Britt M T et al. (2024) IKZF1gene deletions drive resistance to cytarabine in B-cell precursor acute lymphoblastic leukemia.; Haematologica, [no vol.]: [no pages] |
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GSE234637 |
| Verway, Mark et al. (2013) Vitamin D induces interleukin-1? expression: paracrine macrophage epithelial signaling controls M. tuberculosis infection.; PLoS Pathog, 9: e1003407 |
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GSE52819 |
| Verykokakis, Mihalis et al. (2013) Essential Functions for ID Proteins at Multiple Checkpoints in Invariant NKT Cell Development.; J Immunol, [no vol.]: [no pages] |
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GSE50933 |
| Verzi, Michael P et al. (2011) Essential and redundant functions of caudal family proteins in activating adult intestinal genes.; Mol Cell Biol, 31: 2026-39 |
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GSE24633 |
| Veschi, Veronica et al. (2017) Epigenetic siRNA and Chemical Screens Identify SETD8 Inhibition as a Therapeutic Strategy for p53 Activation in High-Risk Neuroblastoma.; Cancer Cell, 31: 50-63 |
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GSE81626 |
| Vesely, Cornelia et al. (2014) ADAR2 induces reproducible changes in sequence and abundance of mature microRNAs in the mouse brain.; Nucleic Acids Res, 42: 12155-68 |
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GSE61068.2 |
| Vessella, Theadora et al. (2024) DDR2 signaling and mechanosensing orchestrate neuroblastoma cell fate through different transcriptome mechanisms.; FEBS Open Bio, 14: 867-882 |
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GSE246550 |
| Veys, Koen et al. (2020) Role of the GLUT1 Glucose Transporter in Postnatal CNS Angiogenesis and Blood-Brain Barrier Integrity.; Circ Res, 127: 466-482 |
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GSE141924 GSE141923 |
| Vialard, Fiorella et al. (2023) Thermoneutrality and severe malaria: investigating the effect of warmer environmental temperatures on the inflammatory response and disease progression.; Front Immunol, 14: 1128466 |
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GSE221454 |
| Viale, Agnes et al. (2007) Big results from small samples: evaluation of amplification protocols for gene expression profiling.; J Biomol Tech, 18: 150-61 |
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GSE2723 |
| Viale, Andrea et al. (2014) Oncogene ablation-resistant pancreatic cancer cells depend on mitochondrial function.; Nature, 514: 628-32 |
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GSE58307 |
| Viard, Julia et al. (2022) Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.; Life Sci Alliance, 5: [no pages] |
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GSE201290 |
| Vicent, Silvestre et al. (2008) A novel lung cancer signature mediates metastatic bone colonization by a dual mechanism.; Cancer Res, 68: 2275-85 |
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GSE10096 |
| Vicent, Silvestre et al. (2012) Cross-species functional analysis of cancer-associated fibroblasts identifies a critical role for CLCF1 and IL-6 in non-small cell lung cancer in vivo.; Cancer Res, 72: 5744-56 |
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GSE48397 |
| Vicente-Gutierrez, Carlos et al. (2019) Astrocytic mitochondrial ROS modulate brain metabolism and mouse behaviour.; Nat Metab, 1: 201-211 |
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GSE124130 |
| Vicetti Miguel, Rodolfo D et al. (2013) Human female genital tract infection by the obligate intracellular bacterium Chlamydia trachomatis elicits robust Type 2 immunity.; PLoS One, 8: e58565 |
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GSE41075 |
| Vichaikul, Sirapa et al. (2022) Inhibition of bromodomain extraterminal histone readers alleviates skin fibrosis in experimental models of scleroderma.; JCI Insight, 7: [no pages] |
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GSE186961 |
| Victor, A Kaitlyn et al. (2023) Analysis and comparisons of gene expression changes in patient- derived neurons from ROHHAD, CCHS, and PWS.; Front Pediatr, 11: 1090084 |
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GSE178687 GSE216125 |
| Victor, Matheus B et al. (2022) Lipid accumulation induced by APOE4 impairs microglial surveillance of neuronal-network activity.; Cell Stem Cell, 29: 1197-1212.e8 |
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GSE203019 |
| Victor, Matheus B et al. [Unknown date]Striatal neurons directly converted from Huntington's disease patient fibroblasts recapitulate age-associated disease phenotypes.; Nat Neurosci, 21: 341-352 |
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GSE84013 |
| Victorino, Pedro Henrique et al. (2021) Retinal Genomic Fabric Remodeling after Optic Nerve Injury.; Genes (Basel), 12: [no pages] |
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GSE133563 |
| Vidal-Cardenas, Sofia L et al. (2010) Comparing effects of mTR and mTERT deletion on gene expression and DNA damage response: a critical examination of telomere length maintenance-independent roles of telomerase.; Nucleic Acids Res, 38: 60-71 |
|
GSE16731 |
| Vidovic, Karina et al. (2013) Leukemia associated mutant Wilms' tumor gene 1 protein promotes expansion of human hematopoietic progenitor cells.; Leuk Res, 37: 1341-9 |
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GSE47560 |
| Vied, Cynthia et al. (2016) Transcriptomic analysis of the hippocampus from six inbred strains of mice suggests a basis for sex-specific susceptibility and severity of neurological disorders.; J Comp Neurol, 524: 2696-710 |
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GSE76567 |
| Vieira de Sá, Renata et al. (2024) ATAXIN-2 intermediate-length polyglutamine expansions elicit ALS-associated metabolic and immune phenotypes.; Nat Commun, 15: 7484 |
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GSE224580 GSE224581 GSE224578 |
| Viemann, Dorothee et al. (2007) MRP8/MRP14 impairs endothelial integrity and induces a caspase-dependent and -independent cell death program.; Blood, 109: 2453-60 |
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GSE5474 |
| Viengkhou, Barney et al. (2024) Interferon-α receptor antisense oligonucleotides reduce neuroinflammation and neuropathology in a mouse model of cerebral interferonopathy.; J Clin Invest, 134: [no pages] |
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GSE231627 |
| Vig, Parminder J S et al. (2018) Differential Expression of Genes Related to Innate Immune Responses in Ex Vivo Spinal Cord and Cerebellar Slice Cultures Infected with West Nile Virus.; Brain Sci, 9: [no pages] |
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GSE123793 |
| Viggars, Mark R et al. (2023) Conserved and species-specific transcriptional responses to daily programmed resistance exercise in rat and mouse.; FASEB J, 37: e23299 |
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GSE228050.1 GSE228050.2 |