List of all 17,124 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Wali, Vikram B et al. (2014) Convergent and divergent cellular responses by ErbB4 isoforms in mammary epithelial cells.; Mol Cancer Res, 12: 1140-55 |
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GSE57346 |
| Walitt, Brian et al. (2024) Deep phenotyping of post-infectious myalgic encephalomyelitis/chronic fatigue syndrome.; Nat Commun, 15: 907 |
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GSE251872 |
| Walkenhorst, Mark et al. (2024) Protective effect of TCR-mediated MAIT cell activation during experimental autoimmune encephalomyelitis.; Nat Commun, 15: 9287 |
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GSE234291 |
| Walker, Deena M et al. (2018) Cocaine Self-administration Alters Transcriptome-wide Responses in the Brain's Reward Circuitry.; Biol Psychiatry, 84: 867-880 |
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GSE110344 |
| Walker, Deena M et al. (2022) Sex-Specific Transcriptional Changes in Response to Adolescent Social Stress in the Brain's Reward Circuitry.; Biol Psychiatry, 91: 118-128 |
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GSE146472 |
| Walker, Emily et al. (2007) Prediction and testing of novel transcriptional networks regulating embryonic stem cell self-renewal and commitment.; Cell Stem Cell, 1: 71-86 |
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GSE7506 |
| Walker, Emily et al. (2010) Polycomb-like 2 associates with PRC2 and regulates transcriptional networks during mouse embryonic stem cell self-renewal and differentiation.; Cell Stem Cell, 6: 153-66 |
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GSE16364 |
| Walker, Emily M et al. (2014) GATA4 and GATA6 regulate intestinal epithelial cytodifferentiation during development.; Dev Biol, 392: 283-94 |
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GSE49471 |
| Walker, Emma C et al. (2016) Murine Oncostatin M Acts via Leukemia Inhibitory Factor Receptor to Phosphorylate Signal Transducer and Activator of Transcription 3 (STAT3) but Not STAT1, an Effect That Protects Bone Mass.; J Biol Chem, 291: 21703-21716 |
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GSE83418 |
| Walker, Faye M et al. (2023) Rapid PTEFb-dependent transcriptional reorganization underpins the glioma adaptive response to radiotherapy.; bioRxiv, [no vol.]: [no pages] |
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GSE263946 |
| Walker, Hailee et al. (2024) Protocol for the generation of single-nuclei RNA-seq libraries and quantification of heterogeneous cell types activated during social interaction.; STAR Protoc, 5: 103395 |
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GSE269499.2 |
| Walker, John R et al. (2004) Applications of a rat multiple tissue gene expression data set.; Genome Res, 14: 742-9 |
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GSE952 |
| Walker, Kieran et al. (2023) Inherited CD19 Deficiency Does Not Impair Plasma Cell Formation or Response to CXCL12.; J Clin Immunol, 43: 1543-1556 |
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GSE219011 |
| Walker, Logan A et al. (2020) CLEAR: coverage-based limiting-cell experiment analysis for RNA-seq.; J Transl Med, 18: 63 |
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GSE115033 |
| Walker, Logan C et al. (2010) Use of DNA-damaging agents and RNA pooling to assess expression profiles associated with BRCA1 and BRCA2 mutation status in familial breast cancer patients.; PLoS Genet, 6: e1000850 |
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GSE17764 |
| Walker, Stephen J et al. (2016) A Putative Blood-Based Biomarker for Autism Spectrum Disorder-Associated Ileocolitis.; Sci Rep, 6: 35820 |
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GSE87847 |
| Walker, Tara L et al. (2016) Lysophosphatidic Acid Receptor Is a Functional Marker of Adult Hippocampal Precursor Cells.; Stem Cell Reports, 6: 552-565 |
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GSE68270 |
| Walkley, Carl R et al. (2008) Conditional mouse osteosarcoma, dependent on p53 loss and potentiated by loss of Rb, mimics the human disease.; Genes Dev, 22: 1662-76 |
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GSE9460 |
| Wall, Emma H et al. (2013) Genetic control of estrogen-regulated transcriptional and cellular responses in mouse uterus.; FASEB J, 27: 1874-86 |
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GSE38800 |
| Wallace, Tiffany A et al. (2008) Tumor immunobiological differences in prostate cancer between African-American and European-American men.; Cancer Res, 68: 927-36 |
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GSE6956 |
| Wallenborn, J Grace et al. (2008) Subchronic inhalation of zinc sulfate induces cardiac changes in healthy rats.; Toxicol Appl Pharmacol, 232: 69-77 |
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GSE11091 |
| Waller, Rachel et al. (2016) Gene expression profiling of the astrocyte transcriptome in multiple sclerosis normal appearing white matter reveals a neuroprotective role.; J Neuroimmunol, 299: 139-146 |
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GSE83670 |
| Waller, Rachel et al. (2022) Transcriptomic Profiling Reveals Discrete Poststroke Dementia Neuronal and Gliovascular Signatures.; Transl Stroke Res, [no vol.]: [no pages] |
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GSE186798.2 GSE186798.1 |
| Waller, Rachel et al. (2024) Establishing mRNA and microRNA interactions driving disease heterogeneity in amyotrophic lateral sclerosis patient survival.; Brain Commun, 6: fcad331 |
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GSE212131 |
| Wallgard, Elisabet et al. (2008) Identification of a core set of 58 gene transcripts with broad and specific expression in the microvasculature.; Arterioscler Thromb Vasc Biol, 28: 1469-76 |
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GSE9202 |
| Walsby, Elisabeth et al. (2014) A novel Cdk9 inhibitor preferentially targets tumor cells and synergizes with fludarabine.; Oncotarget, 5: 375-85 |
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GSE48258 |
| Walsh, Alice M et al. (2017) Triple DMARD treatment in early rheumatoid arthritis modulates synovial T cell activation and plasmablast/plasma cell differentiation pathways.; PLoS One, 12: e0183928 |
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GSE89408 GSE97165 |
| Walsh, Carolyn M et al. (2019) Neutrophils promote CXCR3-dependent itch in the development of atopic dermatitis.; Elife, 8: [no pages] |
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GSE132173 |
| Walsh, Christopher J et al. (2016) Transcriptomic analysis reveals abnormal muscle repair and remodeling in survivors of critical illness with sustained weakness.; Sci Rep, 6: 29334 |
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GSE78929 |
| Walsh, L A et al. (2015) RECK controls breast cancer metastasis by modulating a convergent, STAT3-dependent neoangiogenic switch.; Oncogene, 34: 2189-203 |
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GSE56898.1 GSE56898.2 |
| Walsh, Ryan M et al. (2017) Phf8 loss confers resistance to depression-like and anxiety-like behaviors in mice.; Nat Commun, 8: 15142 |
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GSE90019 |
| Walter, Bianca et al. (2024) Functionally-instructed modifiers of response to ATR inhibition in experimental glioma.; J Exp Clin Cancer Res, 43: 77 |
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GSE229614 |
| Walter, M et al. (2010) Expression profiling in peripheral blood reveals signature for penetrance in DYT1 dystonia.; Neurobiol Dis, 38: 192-200 |
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GSE19419 |
| Walter, Nicole A R et al. (2016) A Systems Approach Implicates a Brain Mitochondrial Oxidative Homeostasis Co-expression Network in Genetic Vulnerability to Alcohol Withdrawal.; Front Genet, 7: 218 |
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GSE89281 |
| Walters, Dana et al. (2020) Transcriptome analysis in mice treated with vigabatrin identifies dysregulation of genes associated with retinal signaling circuitry.; Epilepsy Res, 166: 106395 |
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GSE151956 |
| Walters, Dustin M et al. (2013) Clinical, molecular and genetic validation of a murine orthotopic xenograft model of pancreatic adenocarcinoma using fresh human specimens.; PLoS One, 8: e77065 |
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GSE46385 |
| Walters, Kathie-Anne et al. (2013) Francisella tularensis subsp. tularensis induces a unique pulmonary inflammatory response: role of bacterial gene expression in temporal regulation of host defense responses.; PLoS One, 8: e62412 |
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GSE44320 |
| Walters, Kathie-Anne et al. (2016) 1918 pandemic influenza virus and Streptococcus pneumoniae co-infection results in activation of coagulation and widespread pulmonary thrombosis in mice and humans.; J Pathol, 238: 85-97 |
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GSE70445 |
| Walther, Neele et al. (2013) Aberrant lymphocyte enhancer-binding factor 1 expression is characteristic for sporadic Burkitt's lymphoma.; Am J Pathol, 182: 1092-8 |
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GSE42637 |
| Wamsley, Brie et al. (2018) Rbfox1 Mediates Cell-type-Specific Splicing in Cortical Interneurons.; Neuron, 100: 846-859.e7 |
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GSE119998 |
| Wamstad, Joseph A et al. (2012) Dynamic and coordinated epigenetic regulation of developmental transitions in the cardiac lineage.; Cell, 151: 206-20 |
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GSE47948 |
| Wan, Charles et al. (2014) Progesterone activates multiple innate immune pathways in Chlamydia trachomatis-infected endocervical cells.; Am J Reprod Immunol, 71: 165-77 |
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GSE31149 |
| Wan, Jun et al. (2017) Methylatedcis-regulatory elements mediate KLF4-dependent gene transactivation and cell migration.; Elife, 6: [no pages] |
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GSE97632 |
| Wan, Liling et al. (2017) ENL links histone acetylation to oncogenic gene expression in acute myeloid leukaemia.; Nature, 543: 265-269 |
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GSE80774 |
| Wandler, Anica M et al. (2020) Loss of glucocorticoid receptor expression mediates in vivo dexamethasone resistance in T-cell acute lymphoblastic leukemia.; Leukemia, 34: 2025-2037 |
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GSE141967 |
| Wang, Ajun et al. (2024) Desmoglein-2 Affects Vascular Function in Moyamoya Disease by Interacting with MMP-9 and Influencing PI3K Signaling.; Mol Neurobiol, 61: 6539-6552 |
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GSE249254 |
| Wang, Andi et al. (2021) An epigenetic circuit controls neurogenic programs during neocortex development.; Development, 148: [no pages] |
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GSE169164 |
| Wang, Baihui et al. (2025) The molecular basis of lamin-specific chromatin interactions.; Nat Struct Mol Biol, [no vol.]: [no pages] |
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GSE268922 |
| Wang, Belinda et al. (2017) ATXN1L, CIC, and ETS Transcription Factors Modulate Sensitivity to MAPK Pathway Inhibition.; Cell Rep, 18: 1543-1557 |
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GSE78519 |
| Wang, Bingjie et al. (2024) Compensation of inner retina to early-stage photoreceptor degeneration in a RhoP23H/+mouse model of retinitis pigmentosa.; Exp Eye Res, 240: 109826 |
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GSE281959 |
| Wang, Bo et al. (2021) The pesticide chlorpyrifos promotes obesity by inhibiting diet-induced thermogenesis in brown adipose tissue.; Nat Commun, 12: 5163 |
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GSE178366 |
| Wang, Chang et al. (2023) The chromosomal instability 25 gene signature is identified in clear cell renal cell carcinoma and serves as a predictor for survival and Sunitinib response.; Front Oncol, 13: 1133902 |
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GSE217386 |
| Wang, Chao et al. (2022) Microglial NF-κB drives tau spreading and toxicity in a mouse model of tauopathy.; Nat Commun, 13: 1969 |
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GSE198014 GSE198013 |
| Wang, Chaohu et al. (2023) Inhibition of integrated stress response protects against lipid-induced senescence in hypothalamic neural stem cells in adamantinomatous craniopharyngioma.; Neuro Oncol, 25: 720-732 |
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GSE217717 GSE217718 |
| Wang, Charles et al. (2014) The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance.; Nat Biotechnol, 32: 926-32 |
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GSE47875 |
| Wang, Chelsia Qiuxia et al. (2014) Disruption of Runx1 and Runx3 leads to bone marrow failure and leukemia predisposition due to transcriptional and DNA repair defects.; Cell Rep, 8: 767-82 |
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GSE51107 |
| Wang, Chen et al. (2023) A critical role of RUNX1 in governing megakaryocyte-primed hematopoietic stem cell differentiation.; Blood Adv, 7: 2590-2605 |
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GSE211935 |
| Wang, Chen-Xin et al. (2018) METTL3-mediated m6A modification is required for cerebellar development.; PLoS Biol, 16: e2004880 |
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GSE100528 |
| Wang, Cheng et al. (2020) The Construction and Analysis of lncRNA-miRNA-mRNA Competing Endogenous RNA Network of Schwann Cells in Diabetic Peripheral Neuropathy.; Front Bioeng Biotechnol, 8: 490 |
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GSE142785 |
| Wang, Chenlu et al. (2022) BRD2 interconnects with BRD3 to facilitate Pol II transcription initiation and elongation to prime promoters for cell differentiation.; Cell Mol Life Sci, 79: 338 |
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GSE160558 |
| Wang, Chenxuan et al. (2022) Inhibition of Δ-6 desaturase reduces fatty acid re-esterification in 3T3-L1 adipocytes independent of changes in n3-PUFA cellular content.; Biochim Biophys Acta Mol Cell Biol Lipids, 1867: 159160 |
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GSE197225 |
| Wang, Chia-Chi et al. (2017) Profiling transcriptomes of human SH-SY5Y neuroblastoma cells exposed to maleic acid.; PeerJ, 5: e3175 |
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GSE86510 |
| Wang, Chia-Fang et al. (2017) Lhx2 Expression in Postmitotic Cortical Neurons Initiates Assembly of the Thalamocortical Somatosensory Circuit.; Cell Rep, 18: 849-856 |
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GSE92372 |
| Wang, Claire Q F et al. (2013) IL-17 and TNF Synergistically Modulate Cytokine Expression while Suppressing Melanogenesis: Potential Relevance to Psoriasis.; J Invest Dermatol, [no vol.]: [no pages] |
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GSE40413 |
| Wang, Claire Q F et al. (2014) IL-17 induces inflammation-associated gene products in blood monocytes, and treatment with ixekizumab reduces their expression in psoriasis patient blood.; J Invest Dermatol, 134: 2990-3 |
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GSE55201 |
| Wang, Congwei et al. (2023) Increased G3BP2-Tau interaction in tauopathies is a natural defense against Tau aggregation.; Neuron, 111: 2660-2674.e9 |
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GSE226624 |
| Wang, Dan et al. (2023) S100a16Deficiency Prevents Alcohol-induced Fatty Liver Injury via Inducing MANF Expression in Mice.; Int J Biol Sci, 19: 5074-5088 |
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GSE243683 |
| Wang, Di-Xian et al. (2021) Loss of Growth Differentiation Factor 11 Shortens Telomere Length by Downregulating Telomerase Activity.; Front Physiol, 12: 726345 |
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GSE167538 |
| Wang, Ding et al. (2011) Inhibition of nonsense-mediated RNA decay by the tumor microenvironment promotes tumorigenesis.; Mol Cell Biol, 31: 3670-80 |
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GSE30499 |
| Wang, Dong et al. (2011) Reprogramming transcription by distinct classes of enhancers functionally defined by eRNA.; Nature, 474: 390-4 |
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GSE27682 |
| Wang, Dong et al. (2021) Expression and Tumor-Promoting Effect of Tyrosine Phosphatase Receptor Type N (PTPRN) in Human Glioma.; Front Oncol, 11: 676287 |
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GSE175831 |
| Wang, Dong-Yu et al. (2011) A new gene expression signature, the ClinicoMolecular Triad Classification, may improve prediction and prognostication of breast cancer at the time of diagnosis.; Breast Cancer Res, 13: R92 |
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GSE16984 GSE16987 |
| Wang, Donghai et al. (2011) Paneth cell marker expression in intestinal villi and colon crypts characterizes dietary induced risk for mouse sporadic intestinal cancer.; Proc Natl Acad Sci U S A, 108: 10272-7 |
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GSE29538 |
| Wang, Donghai et al. (2023) The super elongation complex drives transcriptional addiction inMYCN-amplified neuroblastoma.; Sci Adv, 9: eadf0005 |
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GSE199086.3 GSE199086.1 GSE199086.2 |
| Wang, Dongpeng et al. (2022) Active DNA demethylation promotes cell fate specification and the DNA damage response.; Science, 378: 983-989 |
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GSE210316.2.2 GSE210316.2.1 GSE210316.1 |
| Wang, Dongrui et al. (2021) CRISPR Screening of CAR T Cells and Cancer Stem Cells Reveals Critical Dependencies for Cell-Based Therapies.; Cancer Discov, 11: 1192-1211 |
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GSE163401 |
| Wang, Dongsheng et al. (2025) Neuron-targeted caveolin-1 overexpression attenuates cognitive loss and pathological transcriptome changes in symptomatic Alzheimer's disease models.; Signal Transduct Target Ther, 10: 172 |
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GSE278571 |
| Wang, Eric T et al. (2008) Alternative isoform regulation in human tissue transcriptomes.; Nature, 456: 470-6 |
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GSE12946 |
| Wang, Eric T et al. (2012) Transcriptome-wide regulation of pre-mRNA splicing and mRNA localization by muscleblind proteins.; Cell, 150: 710-24 |
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GSE39911.2.1 GSE39911.2.2 |
| Wang, Erlin et al. (2024) Differential pathogenic and molecular features in neurological infection of SARS-CoV-2 Omicron BA.5.2 and BA.2.75 and Delta.; J Med Virol, 96: e29357 |
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GSE234799.2 |
| Wang, Erming et al. (2017) Amylin Treatment Reduces Neuroinflammation and Ameliorates Abnormal Patterns of Gene Expression in the Cerebral Cortex of an Alzheimer's Disease Mouse Model.; J Alzheimers Dis, 56: 47-61 |
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GSE77373 |
| Wang, F et al. (2018) ING5 activity in self-renewal of glioblastoma stem cells via calcium and follicle stimulating hormone pathways.; Oncogene, 37: 286-301 |
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GSE100398 |
| Wang, Fan et al. (2018) Tight regulation of FOXO1 is essential for maintenance of B-cell precursor acute lymphoblastic leukemia.; Blood, 131: 2929-2942 |
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GSE86066 |
| Wang, Fangfang et al. (2020) Molecular mechanisms underlying altered neurobehavioural development of female offspring of mothers with polycystic ovary syndrome: FOS-mediated regulation of neurotrophins in placenta.; EBioMedicine, 60: 102993 |
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GSE154274.2 GSE154274.1 |
| Wang, Fangyu et al. (2023) Resolving the lineage relationship between malignant cells and vascular cells in glioblastomas.; Protein Cell, 14: 105-122 |
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GSE189541 |
| Wang, Feifan et al. (2024) Identification of differentially expressed genes of blood leukocytes for Schizophrenia.; Front Genet, 15: 1398240 |
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GSE263180 |
| Wang, Feng et al. (2024) Identification of pathological pathways centered on circRNA dysregulation in association with irreversible progression of Alzheimer's disease.; Genome Med, 16: 129 |
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GSE272745 GSE272744 |