List of all 20,325 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Wiegreffe, Christoph et al. (2022) Developmental cell death of cortical projection neurons is controlled by a Bcl11a/Bcl6-dependent pathway.; EMBO Rep, 23: e54104 |
|
GSE185287 GSE185288 |
| Wienecke, J et al. (2010) Global gene expression analysis of rodent motor neurons following spinal cord injury associates molecular mechanisms with development of postinjury spasticity.; J Neurophysiol, 103: 761-78 |
|
GSE16710 |
| Wiener, Zoltán et al. (2014) Prox1 promotes expansion of the colorectal cancer stem cell population to fuel tumor growth and ischemia resistance.; Cell Rep, 8: 1943-1956 |
|
GSE47568 |
| Wierczeiko, Anna et al. (2021) Voluntary Wheel Running Did Not Alter Gene Expression in 5xfad Mice, but in Wild-Type Animals Exclusively after One-Day of Physical Activity.; Cells, 10: [no pages] |
|
GSE164798 |
| Wierinckx, Anne et al. (2011) Integrated genomic profiling identifies loss of chromosome 11p impacting transcriptomic activity in aggressive pituitary PRL tumors.; Brain Pathol, 21: 533-43 |
|
GSE22812 |
| Wieskopf, Jeffrey S et al. (2015) The nicotinic ?6 subunit gene determines variability in chronic pain sensitivity via cross-inhibition of P2X2/3 receptors.; Sci Transl Med, 7: 287ra72 |
|
GSE65997 |
| Wiggin, Timothy D et al. (2008) Rosiglitazone treatment reduces diabetic neuropathy in streptozotocin-treated DBA/2J mice.; Endocrinology, 149: 4928-37 |
|
GSE11343 |
| Wiita, Arun P et al. (2013) Global cellular response to chemotherapy-induced apoptosis.; Elife, 2: e01236 |
|
GSE48785 |
| Wijayatunge, Ranjula et al. (2018) The histone demethylase Kdm6b regulates a mature gene expression program in differentiating cerebellar granule neurons.; Mol Cell Neurosci, 87: 4-17 |
|
GSE106120 |
| Wilbourne, Jillian et al. (2023) Crucial Roles of the Mesenchymal Androgen Receptor in Wolffian Duct Development.; Endocrinology, 165: [no pages] |
|
GSE246141 |
| Wilczek, Michael P et al. (2021) The MAPK/ERK Pathway and the Role of DUSP1 in JCPyV Infection of Primary Astrocytes.; Viruses, 13: [no pages] |
|
GSE183322 |
| Wilderman, Andrea et al. (2024) A distant global control region is essential for normal expression of anterior HOXA genes during mouse and human craniofacial development.; Nat Commun, 15: 136 |
|
GSE198297.1 GSE198297.2 |
| Wildey, Gary et al. (2023) Retinoblastoma Expression and Targeting by CDK4/6 Inhibitors in Small Cell Lung Cancer.; Mol Cancer Ther, 22: 264-273 |
|
GSE217646 |
| Wilding Crawford, Laura et al. (2008) Gene expression profiling of a mouse model of pancreatic islet dysmorphogenesis.; PLoS One, 3: e1611 |
|
GSE4926 |
| Wilding, Jennifer L et al. (2010) Replication error deficient and proficient colorectal cancer gene expression differences caused by 3'UTR polyT sequence deletions.; Proc Natl Acad Sci U S A, 107: 21058-63 |
|
GSE24795 |
| Wiles, Kelsey Nicole et al. (2021) IκB Kinase-β Regulates Neutrophil Recruitment Through Activation of STAT3 Signaling in the Esophagus.; Cell Mol Gastroenterol Hepatol, 12: 1743-1759 |
|
GSE154129 |
| Wilflingseder, Julia et al. (2020) Enhancer and super-enhancer dynamics in repair after ischemic acute kidney injury.; Nat Commun, 11: 3383 |
|
GSE114293 |
| Wilhelm, C J et al. (2014) Understanding the addiction cycle: a complex biology with distinct contributions of genotype vs. sex at each stage.; Neuroscience, 279: 168-86 |
|
GSE56249 GSE56247 |
| Wilhelmi, Ilka et al. (2021) Enriched Alternative Splicing in Islets of Diabetes-Susceptible Mice.; Int J Mol Sci, 22: [no pages] |
|
GSE183247 |
| Wilk, C Matthias et al. (2023) Circulating senescent myeloid cells drive blood brain barrier breakdown and neurodegeneration.; bioRxiv, [no vol.]: [no pages] |
|
GSE227984 |
| Wilk, Esther et al. (2015) RNAseq expression analysis of resistant and susceptible mice after influenza A virus infection identifies novel genes associated with virus replication and important for host resistance to infection.; BMC Genomics, 16: 655 |
|
GSE66040 |
| Wilkens, Julia et al. (2013) Uterine NK cells regulate endometrial bleeding in women and are suppressed by the progesterone receptor modulator asoprisnil.; J Immunol, 191: 2226-35 |
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GSE47577 |
| Wilkens, Ruven et al. (2022) Diverse maturity-dependent and complementary anti-apoptotic brakes safeguard human iPSC-derived neurons from cell death.; Cell Death Dis, 13: 887 |
|
GSE207984 |
| Wilkinson, Meredyth G Ll et al. (2023) Role of CD14+ monocyte-derived oxidised mitochondrial DNA in the inflammatory interferon type 1 signature in juvenile dermatomyositis.; Ann Rheum Dis, 82: 658-669 |
|
GSE221091 |
| Will, Britta et al. (2012) Stem and progenitor cells in myelodysplastic syndromes show aberrant stage-specific expansion and harbor genetic and epigenetic alterations.; Blood, 120: 2076-86 |
|
GSE38955 |
| Willekens, Jérèmy et al. (2019) Wnt Signaling Pathways Are Dysregulated in Rat Female Cerebellum Following Early Methyl Donor Deficiency.; Mol Neurobiol, 56: 892-906 |
|
GSE104164 |
| Willeman, Mari N et al. (2018) The PKC-? selective inhibitor, Enzastaurin, impairs memory in middle-aged rats.; PLoS One, 13: e0198256 |
|
GSE113327 |
| Willems, Christophe et al. (2016) Regeneration in the Pituitary After Cell-Ablation Injury: Time-Related Aspects and Molecular Analysis.; Endocrinology, 157: 705-21 |
|
GSE72992 |
| Willer, A et al. (2015) TGIF1 is a negative regulator of MLL-rearranged acute myeloid leukemia.; Leukemia, 29: 1018-31 |
|
GSE55713 |
| Willet, Spencer G et al. (2018) Regenerative proliferation of differentiated cells by mTORC1-dependent paligenosis.; EMBO J, 37: [no pages] |
|
GSE103570 |
| William, Dilusha A et al. (2007) Identification of oscillatory genes in somitogenesis from functional genomic analysis of a human mesenchymal stem cell model.; Dev Biol, 305: 172-86 |
|
GSE7012 |
| Williams, Bret R et al. (2008) Aneuploidy affects proliferation and spontaneous immortalization in mammalian cells.; Science, 322: 703-9 |
|
GSE12501 |
| Williams, Celia et al. (2009) Transcriptome analysis of synaptoneurosomes identifies neuroplasticity genes overexpressed in incipient Alzheimer's disease.; PLoS One, 4: e4936 |
|
GSE12685 |
| Williams, Christopher M J et al. (2009) AP-2gamma promotes proliferation in breast tumour cells by direct repression of the CDKN1A gene.; EMBO J, 28: 3591-601 |
|
GSE15481 |
| Williams, Erik A et al. (2023) Novel SOX10 indel mutations drive schwannomas through impaired transactivation of myelination gene programs.; Neuro Oncol, 25: 2221-2236 |
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GSE218097 |
| Williams, Evan G et al. (2014) An evolutionarily conserved role for the aryl hydrocarbon receptor in the regulation of movement.; PLoS Genet, 10: e1004673 |
|
GSE60150 |
| Williams, Evan P et al. (2023) Deep spatial profiling of Venezuelan equine encephalitis virus reveals increased genetic diversity amidst neuroinflammation and cell death during brain infection.; J Virol, 97: e0082723 |
|
GSE213725 |
| Williams, Evan P et al. (2025) Broad spectrum antiviral BDGR-164 provides protection against lethal neurotropic alphavirus infection in mice.; Antiviral Res, 240: 106206 |
|
GSE255795 |
| Williams, Evan P et al. (2025) The antiviral BDGR-49 provides protection from lethal, neurotropic Venezuelan equine encephalitis virus intranasal infection in mice.; J Virol, 99: e0167924 |
|
GSE277300 |
| Williams, J Bradley et al. (2009) A model of gene-environment interaction reveals altered mammary gland gene expression and increased tumor growth following social isolation.; Cancer Prev Res (Phila), 2: 850-61 |
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GSE16110 |
| Williams, Kristine et al. (2011) TET1 and hydroxymethylcytosine in transcription and DNA methylation fidelity.; Nature, 473: 343-8 |
|
GSE24842 |
| Williams, Kristine et al. (2021) Epigenetic rewiring of skeletal muscle enhancers after exercise training supports a role in whole-body function and human health.; Mol Metab, 53: 101290 |
|
GSE144133 |
| Williams, Kyle B et al. (2024) Pharmacogenomic synthetic lethal screens reveal hidden vulnerabilities and new therapeutic approaches for treatment of NF1-associated tumors.; bioRxiv, [no vol.]: [no pages] |
|
GSE262030 |
| Williams, Lanie A et al. (2024) Increased Perfluorooctanesulfonate (PFOS) Toxicity and Accumulation Is Associated with Perturbed Prostaglandin Metabolism and Increased Organic Anion Transport Protein (OATP) Expression.; Toxics, 12: [no pages] |
|
GSE249617 |
| Williams, Mark S et al. (2025) Larp1 supports brain growth and spatial memory via post-transcriptional control of the translation machinery.; bioRxiv, [no vol.]: [no pages] |
|
GSE286175 |
| Williams, Olivia O F et al. (2024) Prenatal exposure to valproic acid induces sex-specific alterations in rat cortical and hippocampal neuronal structure and function in vitro.; Prog Neuropsychopharmacol Biol Psychiatry, 136: 111222 |
|
GSE275787 |
| Williams, P Mickey et al. (2010) A novel method of amplification of FFPET-derived RNA enables accurate disease classification with microarrays.; J Mol Diagn, 12: 680-6 |
|
GSE19246 |
| Williams, Pete A et al. (2017) Vitamin B3modulates mitochondrial vulnerability and prevents glaucoma in aged mice.; Science, 355: 756-760 |
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GSE90654 |
| Williams, Sarah E et al. (2022) Mammalian brain glycoproteins exhibit diminished glycan complexity compared to other tissues.; Nat Commun, 13: 275 |
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GSE184516 |
| Williams, Sarah M et al. (2019) An integrative analysis of non-coding regulatory DNA variations associated with autism spectrum disorder.; Mol Psychiatry, 24: 1707-1719 |
|
GSE98088 |
| Williams, Sarah S et al. (2004) Large-scale reprogramming of cranial neural crest gene expression by retinoic acid exposure.; Physiol Genomics, 19: 184-97 |
|
GSE1588 |
| Williams, Tristan et al. (2023) Humanized APOE genotypes influence lifespan independently of tau aggregation in the P301S mouse model of tauopathy.; Acta Neuropathol Commun, 11: 99 |
|
GSE226093 |
| Williamson, Michael R et al. (2025) Learning-associated astrocyte ensembles regulate memory recall.; Nature, 637: 478-486 |
|
GSE254016 |
| Willis, Monte S et al. (2009) Cardiac muscle ring finger-1 increases susceptibility to heart failure in vivo.; Circ Res, [no vol.]: [no pages] |
|
GSE11661 |
| Willis, Simon N et al. (2017) Environmental sensing by mature B cells is controlled by the transcription factors PU.1 and SpiB.; Nat Commun, 8: 1426 |
|
GSE90094 |
| Willmann, Stefanie J et al. (2016) The global gene expression profile of the secondary transition during pancreatic development.; Mech Dev, 139: 51-64 |
|
GSE66856 |
| Willsky, Gail R et al. (2006) Diabetes-altered gene expression in rat skeletal muscle corrected by oral administration of vanadyl sulfate.; Physiol Genomics, 26: 192-201 |
|
GSE3068 |
| Wilson, Andrew A et al. (2015) Emergence of a stage-dependent human liver disease signature with directed differentiation of alpha-1 antitrypsin-deficient iPS cells.; Stem Cell Reports, 4: 873-85 |
|
GSE66076 |
| Wilson, Boris G et al. (2010) Epigenetic antagonism between polycomb and SWI/SNF complexes during oncogenic transformation.; Cancer Cell, 18: 316-28 |
|
GSE23656 |
| Wilson, Dawn N et al. (2005) Microarray analysis of postictal transcriptional regulation of neuropeptides.; J Mol Neurosci, 25: 285-98 |
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GSE1831 GSE1834 |
| Wilson, Elizabeth B et al. (2013) Blockade of chronic type I interferon signaling to control persistent LCMV infection.; Science, 340: 202-7 |
|
GSE44322 |
| Wilson, George D et al. (2013) Isolation and genomic characterization of stem cells in head and neck cancer.; Head Neck, 35: 1573-82 |
|
GSE55487 |
| Wilson, Kathleen A et al. (2011) NFBD1/MDC1 regulates Cav1 and Cav2 independently of DNA damage and p53.; Mol Cancer Res, 9: 766-81 |
|
GSE23010 |
| Wilson, Stephen et al. (2017) The histone demethylase KDM3A regulates the transcriptional program of the androgen receptor in prostate cancer cells.; Oncotarget, 8: 30328-30343 |
|
GSE86547 |
| Wilson-Verdugo, Martí et al. (2024) Reversal of high-glucose-induced transcriptional and epigenetic memories through NRF2 pathway activation.; Life Sci Alliance, 7: [no pages] |
|
GSE241565.1 GSE241565.2 |
| Wiltshire, Sean A et al. (2011) Quantitative trait locus analysis, pathway analysis, and consomic mapping show genetic variants of Tnni3k, Fpgt, or H28 control susceptibility to viral myocarditis.; J Immunol, 186: 6398-405 |
|
GSE19496 |
| Wimmer, Isabella et al. (2018) Systematic evaluation of RNA quality, microarray data reliability and pathway analysis in fresh, fresh frozen and formalin-fixed paraffin-embedded tissue samples.; Sci Rep, 8: 6351 |
|
GSE104561 GSE104634 GSE104562 |
| Wimmer, Isabella et al. (2019) Microglia pre-activation and neurodegeneration precipitate neuroinflammation without exacerbating tissue injury in experimental autoimmune encephalomyelitis.; Acta Neuropathol Commun, 7: 14 |
|
GSE119793 |
| Wind, Matthew et al. (2021) Defining the signalling determinants of a posterior ventral spinal cord identity in human neuromesodermal progenitor derivatives.; Development, 148: [no pages] |
|
GSE151097 |
| Windak, Renata et al. (2013) The AP-1 transcription factor c-Jun prevents stress-imposed maladaptive remodeling of the heart.; PLoS One, 8: e73294 |
|
GSE47898 |
| Winden, Kellen D et al. (2011) A systems level, functional genomics analysis of chronic epilepsy.; PLoS One, 6: e20763 |
|
GSE27166 |
| Winden, Kellen D et al. (2015) Molecular alterations in areas generating fast ripples in an animal model of temporal lobe epilepsy.; Neurobiol Dis, 78: 35-44 |
|
GSE68430 |
| Winder, David M et al. (2011) Overexpression of the oncostatin M receptor in cervical squamous cell carcinoma cells is associated with a pro-angiogenic phenotype and increased cell motility and invasiveness.; J Pathol, 225: 448-62 |
|
GSE27480 |
| Windpassinger, Christian et al. (2017) CDK10 Mutations in Humans and Mice Cause Severe Growth Retardation, Spine Malformations, and Developmental Delays.; Am J Hum Genet, 101: 391-403 |
|
GSE98628 |
| Windrem, Martha S et al. (2017) Human iPSC Glial Mouse Chimeras Reveal Glial Contributions to Schizophrenia.; Cell Stem Cell, 21: 195-208.e6 |
|
GSE86906 |
| Windrem, Martha S et al. (2020) Human Glial Progenitor Cells Effectively Remyelinate the Demyelinated Adult Brain.; Cell Rep, 31: 107658 |
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GSE112557 |
| Winek, Katarzyna et al. (2020) Transfer RNA fragments replace microRNA regulators of the cholinergic poststroke immune blockade.; Proc Natl Acad Sci U S A, 117: 32606-32616 |
|
GSE158311 GSE158312 |
| Wingfield, Kelly K et al. (2024) The ultrasonic vocalization (USV) syllable profile during neonatal opioid withdrawal and a kappa opioid receptor component to increased USV emissions in female mice.; Psychopharmacology (Berl), [no vol.]: [no pages] |
|
GSE271337 |
| Wingo, Aliza P et al. (2015) DICER1 and microRNA regulation in post-traumatic stress disorder with comorbid depression.; Nat Commun, 6: 10106 |
|
GSE67663 |
| Wingo, Aliza P et al. (2018) Expression of the PPM1F Gene Is Regulated by Stress and Associated With Anxiety and Depression.; Biol Psychiatry, 83: 284-295 |
|
GSE100084 GSE100085 |
| Wingrove, James A et al. (2008) Correlation of peripheral-blood gene expression with the extent of coronary artery stenosis.; Circ Cardiovasc Genet, 1: 31-8 |
|
GSE10195 |
| Winkel, Angelika F et al. (2015) Characterization of RA839, a Noncovalent Small Molecule Binder to Keap1 and Selective Activator of Nrf2 Signaling.; J Biol Chem, 290: 28446-55 |
|
GSE71695 |
| Winkler, Claudia et al. (2018) Overexpression of PP1-NIPP1 limits the capacity of cells to repair DNA double-strand breaks.; J Cell Sci, 131: [no pages] |
|
GSE104320 |
| Winkler, Clayton W et al. (2024) C-C motif chemokine receptor 2 and 7 synergistically control inflammatory monocyte recruitment but the infecting virus dictates monocyte function in the brain.; Commun Biol, 7: 494 |
|
GSE254432 |
| Winkler, Manuel et al. (2019) Pianp deficiency links GABABreceptor signaling and hippocampal and cerebellar neuronal cell composition to autism-like behavior.; Mol Psychiatry, [no vol.]: [no pages] |
|
GSE124791 |
| Winkler, Thomas et al. (2013) Defective telomere elongation and hematopoiesis from telomerase-mutant aplastic anemia iPSCs.; J Clin Invest, 123: 1952-63 |
|
GSE42869 |
| Winn, Mary E et al. (2010) The effects of globin on microarray-based gene expression analysis of mouse blood.; Mamm Genome, 21: 268-75 |
|
GSE19282 |
| Winslow, Monte M et al. (2011) Suppression of lung adenocarcinoma progression by Nkx2-1.; Nature, 473: 101-4 |
|
GSE26874 |
| Winston, Tackla et al. (2024) Lineage-Specific Mesenchymal Stromal Cells Derived from Human iPSCs Showed Distinct Patterns in Transcriptomic Profile and Extracellular Vesicle Production.; Adv Sci (Weinh), 11: e2308975 |
|
GSE272480 |
| Winstone, Joanna K et al. (2022) Glyphosate infiltrates the brain and increases pro-inflammatory cytokine TNFα: implications for neurodegenerative disorders.; J Neuroinflammation, 19: 193 |
|
GSE253299 |
| Winter, Stuart S et al. (2007) Identification of genomic classifiers that distinguish induction failure in T-lineage acute lymphoblastic leukemia: a report from the Children's Oncology Group.; Blood, 110: 1429-38 |
|
GSE14613 |