List of all 21,870 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Tsitsiou, Eleni et al. (2012) Transcriptome analysis shows activation of circulating CD8+ T cells in patients with severe asthma.; J Allergy Clin Immunol, 129: 95-103 |
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GSE31773 |
| Tsitsipatis, Dimitrios et al. (2022) Transcriptomic analysis of human ALS skeletal muscle reveals a disease-specific pattern of dysregulated circRNAs.; Aging (Albany NY), 14: 9832-9859 |
|
GSE215364 |
| Tso, Cho-Lea et al. (2006) Primary glioblastomas express mesenchymal stem-like properties.; Mol Cancer Res, 4: 607-19 |
|
GSE5107 |
| Tso, Michael K et al. (2021) Gene expression profiling of brain endothelial cells after experimental subarachnoid haemorrhage.; Sci Rep, 11: 7818 |
|
GSE155137 |
| Tsou, Amy M et al. (2022) Neuropeptide regulation of non-redundant ILC2 responses at barrier surfaces.; Nature, 611: 787-793 |
|
GSE211735 |
| Tsubota, Akihito et al. (2014) Involvement of MAP3K8 and miR-17-5p in poor virologic response to interferon-based combination therapy for chronic hepatitis C.; PLoS One, 9: e97078 |
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GSE42697 |
| Tsubota, Shoma et al. (2017) PRC2-Mediated Transcriptomic Alterations at the Embryonic Stage Govern Tumorigenesis and Clinical Outcome in MYCN-Driven Neuroblastoma.; Cancer Res, 77: 5259-5271 |
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GSE87781 GSE87783 GSE87782 |
| Tsuchiya, Masato et al. (2010) Gene expression in nontumoral liver tissue and recurrence-free survival in hepatitis C virus-positive hepatocellular carcinoma.; Mol Cancer, 9: 74 |
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GSE17856 |
| Tsuchiya, Tomoshi et al. (2004) Additive regulation of hepatic gene expression by dwarfism and caloric restriction.; Physiol Genomics, 17: 307-15 |
|
GSE1093 |
| Tsuge, Mitsuru et al. (2014) Gene expression analysis in children with complex seizures due to influenza A(H1N1)pdm09 or rotavirus gastroenteritis.; J Neurovirol, 20: 73-84 |
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GSE50628 |
| Tsuji, S et al. (2012) Potential responders to FOLFOX therapy for colorectal cancer by Random Forests analysis.; Br J Cancer, 106: 126-32 |
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GSE28702 |
| Tsuji-Tamura, Kiyomi et al. (2016) Inhibition of the PI3K-Akt and mTORC1 signaling pathways promotes the elongation of vascular endothelial cells.; J Cell Sci, 129: 1165-78 |
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GSE76366 |
| Tsukada, Yu-ichi et al. (2010) KDM7 is a dual demethylase for histone H3 Lys 9 and Lys 27 and functions in brain development.; Genes Dev, 24: 432-7 |
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GSE17494 |
| Tsukamoto, Kosuke et al. (2013) Identification of apolipoprotein D as a cardioprotective gene using a mouse model of lethal atherosclerotic coronary artery disease.; Proc Natl Acad Sci U S A, 110: 17023-8 |
|
GSE49937 |
| Tsukamoto, Shunsuke et al. (2011) Clinical significance of osteoprotegerin expression in human colorectal cancer.; Clin Cancer Res, 17: 2444-50 |
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GSE21510 |
| Tsuruda, Mariko et al. (2024) Bone morphogenetic protein 4 induces hematopoietic stem cell development from murine hemogenic endothelial cells in culture.; Stem Cell Reports, 19: 1677-1689 |
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GSE271522 |
| Tsvetkov, Andrey et al. (2025) Age-associated G-quadruplex accumulation and DDX5 loss shape chromatin landscapes in human astrocytes.; Res Sq, [no vol.]: [no pages] |
|
GSE307272 |
| Tsvetkov, Peter et al. (2019) Mitochondrial metabolism promotes adaptation to proteotoxic stress.; Nat Chem Biol, 15: 681-689 |
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GSE123638 GSE123637 |
| Tsyporin, Jeremiah et al. (2021) Transcriptional repression by FEZF2 restricts alternative identities of cortical projection neurons.; Cell Rep, 35: 109269 |
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GSE160202 GSE142269 GSE149253 |
| Tu, Chengyi et al. (2022) A transcriptomic atlas of drug-induced endothelial dysfunction in human endothelial cells.; J Mol Cell Cardiol, 173: 115-117 |
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GSE217898 |
| Tu, Shichun et al. (2017) NitroSynapsin therapy for a mouse MEF2C haploinsufficiency model of human autism.; Nat Commun, 8: 1488 |
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GSE103298 |
| Tu, Xiaofan et al. (2023) Airway and parenchyma transcriptomics in a house dust mite model of experimental asthma.; Respir Res, 24: 32 |
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GSE199853 |
| Tu, Yiji et al. (2020) Gene Expression Profiling of the Sciatic Nerve in Streptozotocin-Induced Diabetic Rats with Peripheral Neuropathy.; J Diabetes Res, 2020: 5283284 |
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GSE147732 |
| Tu, Zhaowei et al. (2022) Autism-associated chromatin remodeler CHD8 regulates erythroblast cytokinesis and fine-tunes the balance of Rho GTPase signaling.; Cell Rep, 40: 111072 |
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GSE189853 |
| Tuddenham, John F et al. (2024) A cross-disease resource of living human microglia identifies disease-enriched subsets and tool compounds recapitulating microglial states.; Nat Neurosci, [no vol.]: [no pages] |
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GSE202556 |
| Tuesta, Luis M et al. (2019) In vivo nuclear capture and molecular profiling identifies Gmeb1 as a transcriptional regulator essential for dopamine neuron function.; Nat Commun, 10: 2508 |
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GSE106956 |
| Tufan, Turan et al. (2024) Rapid unleashing of macrophage efferocytic capacity via transcriptional pause release.; Nature, 628: 408-415 |
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GSE253577 |
| Tufegdžić Vidaković, Ana et al. (2020) Regulation of the RNAPII Pool Is Integral to the DNA Damage Response.; Cell, 180: 1245-1261.e21 |
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GSE143537 |
| Tulacz, Dorota et al. (2013) Transcriptional profiling of left ventricle and peripheral blood mononuclear cells in a rat model of postinfarction heart failure.; BMC Med Genomics, 6: 49 |
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GSE47495 |
| Tumes, Damon J et al. (2013) The polycomb protein Ezh2 regulates differentiation and plasticity of CD4(+) T helper type 1 and type 2 cells.; Immunity, 39: 819-32 |
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GSE50729 |
| Tummala, Krishna S et al. (2014) Inhibition of de novo NAD(+) synthesis by oncogenic URI causes liver tumorigenesis through DNA damage.; Cancer Cell, 26: 826-39 |
|
GSE48654 |
| Tun, Han W et al. (2008) Pathway analysis of primary central nervous system lymphoma.; Blood, 111: 3200-10 |
|
GSE11392 |
| Tunbak, Hale et al. (2020) The HUSH complex is a gatekeeper of type I interferon through epigenetic regulation of LINE-1s.; Nat Commun, 11: 5387 |
|
GSE135765 |
| Tung, Celestine S et al. (2009) PAX2 expression in low malignant potential ovarian tumors and low-grade ovarian serous carcinomas.; Mod Pathol, 22: 1243-50 |
|
GSE14001 |
| Tung, Lin Tze et al. (2021) p53-dependent induction of P2X7 on hematopoietic stem and progenitor cells regulates hematopoietic response to genotoxic stress.; Cell Death Dis, 12: 923 |
|
GSE171691 |
| Tung, Wesley et al. (2026) Mild SARS-CoV-2 maternal infection in mice induces transient offspring neurodevelopmental aberrance.; Proc Natl Acad Sci U S A, 123: e2518294123 |
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GSE317803.1 GSE317803.2 |
| Tung, Ying-Tsen et al. (2015) Mir-17?92 Governs Motor Neuron Subtype Survival by Mediating Nuclear PTEN.; Cell Rep, 11: 1305-18 |
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GSE67795 |
| Tuoc, Tran Cong et al. (2013) Chromatin regulation by BAF170 controls cerebral cortical size and thickness.; Dev Cell, 25: 256-69 |
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GSE45629 |
| Tuomela, Soile et al. (2012) Identification of early gene expression changes during human Th17 cell differentiation.; Blood, 119: e151-60 |
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GSE35103 |
| Tuomela, Soile et al. (2013) Gene expression profiling of immune-competent human cells exposed to engineered zinc oxide or titanium dioxide nanoparticles.; PLoS One, 8: e68415 |
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GSE39316 |
| Turan, Nil et al. (2011) A systems biology approach identifies molecular networks defining skeletal muscle abnormalities in chronic obstructive pulmonary disease.; PLoS Comput Biol, 7: e1002129 |
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GSE27536 |
| Turashvili, Gulisa et al. (2007) Novel markers for differentiation of lobular and ductal invasive breast carcinomas by laser microdissection and microarray analysis.; BMC Cancer, 7: 55 |
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GSE5764 |
| Turcan, Sevin et al. (2010) Lack of nAChR activity depresses cochlear maturation and up-regulates GABA system components: temporal profiling of gene expression in alpha9 null mice.; PLoS One, 5: e9058 |
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GSE18567 |
| Turcan, Sevin et al. (2018) Mutant-IDH1-dependent chromatin state reprogramming, reversibility, and persistence.; Nat Genet, 50: 62-72 |
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GSE85939 |
| Turco, Anne E et al. (2021) A mechanism linking perinatal 2,3,7,8 tetrachlorodibenzo-p-dioxin exposure to lower urinary tract dysfunction in adulthood.; Dis Model Mech, 14: [no pages] |
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GSE166395 |
| Turcotte, Moriah Gildart et al. (2025) Unique Role of Intracellular Perinuclear β1-Adrenergic Receptors in Defining Signaling Compartmentation and Pathological Cardiac Remodeling.; Circulation, 152: 682-698 |
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GSE305499 |
| Turelli, Priscilla et al. (2020) Primate-restricted KRAB zinc finger proteins and target retrotransposons control gene expression in human neurons.; Sci Adv, 6: eaba3200 |
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GSE144152 GSE144151 |
| Turetz, Meredith L et al. (2009) Trachea epithelium as a "canary" for cigarette smoking-induced biologic phenotype of the small airway epithelium.; Clin Transl Sci, 2: 260-72 |
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GSE13933 |
| Turgeon, Naomie et al. (2014) The acetylome regulators Hdac1 and Hdac2 differently modulate intestinal epithelial cell dependent homeostatic responses in experimental colitis.; Am J Physiol Gastrointest Liver Physiol, 306: G594-605 |
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GSE54785 |
| Turi, Marcello et al. (2023) Transcriptome Analysis of Diffuse Large B-Cell Lymphoma Cells Inducibly Expressing MyD88 L265P Mutation Identifies Upregulated CD44, LGALS3, NFKBIZ, and BATF as Downstream Targets of Oncogenic NF-κB Signaling.; Int J Mol Sci, 24: [no pages] |
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GSE226797 |
| Turkheimer, Federico E et al. (2006) Chromosomal patterns of gene expression from microarray data: methodology, validation and clinical relevance in gliomas.; BMC Bioinformatics, 7: 526 |
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GSE2817 |
| Turner, Leslie M et al. (2014) Genomic networks of hybrid sterility.; PLoS Genet, 10: e1004162 |
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GSE54089 |
| Turner, S M F et al. (2016) Transcriptome assessment of the Pompe (Gaa-/-) mouse spinal cord indicates widespread neuropathology.; Physiol Genomics, 48: 785-794 |
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GSE82081 |
| Turner, Sara M F et al. (2022) Hyperbaric Oxygen Therapy after Mid-Cervical Spinal Contusion Injury.; J Neurotrauma, 39: 715-723 |
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GSE185600 |
| Turpin, Marion et al. (2026) TDG orchestrates ATF4-dependent gene transcription during retinoic acid-induced cell fate acquisition.; Nucleic Acids Res, 54: [no pages] |
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GSE262587 |
| Turrero García, Miguel et al. (2020) Transcriptional regulation of MGE progenitor proliferation by PRDM16 controls cortical GABAergic interneuron production.; Development, 147: [no pages] |
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GSE159728 |
| Turtle, Cameron J et al. (2011) Innate signals overcome acquired TCR signaling pathway regulation and govern the fate of human CD161(hi) CD8?? semi-invariant T cells.; Blood, 118: 2752-62 |
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GSE23663 |
| Tutino, Vincent M et al. (2018) Circulating neutrophil transcriptome may reveal intracranial aneurysm signature.; PLoS One, 13: e0191407 |
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GSE106520 |
| Tuvim, Michael J et al. (2009) Augmented lung inflammation protects against influenza A pneumonia.; PLoS One, 4: e4176 |
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GSE13740 |
| Tuvim, Michael J et al. (2012) Synergistic TLR2/6 and TLR9 activation protects mice against lethal influenza pneumonia.; PLoS One, 7: e30596 |
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GSE28994 |
| Tuz, Ali A et al. (2024) Stroke and myocardial infarction induce neutrophil extracellular trap release disrupting lymphoid organ structure and immunoglobulin secretion.; Nat Cardiovasc Res, 3: 525-540 |
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GSE254410 |
| Tveriakhina, Lena et al. (2024) Temporal dynamics and stoichiometry in human Notch signaling from Notch synaptic complex formation to nuclear entry of the Notch intracellular domain.; Dev Cell, [no vol.]: [no pages] |
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GSE235637 |
| Tvrdik, Petr et al. (2006) Reversal of Hox1 gene subfunctionalization in the mouse.; Dev Cell, 11: 239-50 |
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GSE5124 GSE5126 |
| Tweedie, David et al. (2013) Changes in mouse cognition and hippocampal gene expression observed in a mild physical- and blast-traumatic brain injury.; Neurobiol Dis, [no vol.]: [no pages] |
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GSE44625 |
| Tweedie, David et al. (2013) Exendin-4, a glucagon-like peptide-1 receptor agonist prevents mTBI-induced changes in hippocampus gene expression and memory deficits in mice.; Exp Neurol, [no vol.]: [no pages] |
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GSE41345 |
| Tweedie, David et al. (2016) Blast traumatic brain injury-induced cognitive deficits are attenuated by preinjury or postinjury treatment with the glucagon-like peptide-1 receptor agonist, exendin-4.; Alzheimers Dement, 12: 34-48 |
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GSE71846 |
| Tyagi, Alpna et al. (2022) Sirt3 deficiency induced down regulation of insulin degrading enzyme in comorbid Alzheimer's disease with metabolic syndrome.; Sci Rep, 12: 19808 |
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GSE216081 |
| Tyagi, Witty et al. (2024) Temporal regulation of acetylation status determines PARP1 role in DNA damage response and metabolic homeostasis.; Sci Adv, 10: eado7720 |
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GSE269944 |
| Tyshkovskiy, Alexander et al. (2019) Identification and Application of Gene Expression Signatures Associated with Lifespan Extension.; Cell Metab, 30: 573-593.e8 |
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GSE131868 GSE131754 |
| Tyssowski, Kelsey M et al. (2018) Different Neuronal Activity Patterns Induce Different Gene Expression Programs.; Neuron, 98: 530-546.e11 |
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GSE111899 |
| Tyzack, Giulia E et al. (2017) A neuroprotective astrocyte state is induced by neuronal signal EphB1 but fails in ALS models.; Nat Commun, 8: 1164 |
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GSE102903 |
| Tyzack, Giulia E et al. (2021) Aberrant cytoplasmic intron retention is a blueprint for RNA binding protein mislocalization in VCP-related amyotrophic lateral sclerosis.; Brain, 144: 1985-1993 |
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GSE152983 |
| Tzanoulinou, Stamatina et al. (2022) Inhibition of Trpv4 rescues circuit and social deficits unmasked by acute inflammatory response in a Shank3 mouse model of Autism.; Mol Psychiatry, 27: 2080-2094 |
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GSE139683 |
| Tzeng, Christopher P et al. (2023) Activity-induced MeCP2 phosphorylation regulates retinogeniculate synapse refinement.; Proc Natl Acad Sci U S A, 120: e2310344120 |
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GSE245022 |
| Türker, Fulya et al. (2024) Neuronal membrane proteasome-derived peptides modulate NMDAR-dependent neuronal signaling to promote changes in gene expression.; Mol Biol Cell, 35: ar6 |
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GSE227371 |
| Týcová, Irena et al. (2016) Molecular patterns of diffuse and nodular parathyroid hyperplasia in long-term hemodialysis.; Am J Physiol Endocrinol Metab, 311: E720-E729 |
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GSE75886 |
| Uaesoontrachoon, Kitipong et al. (2013) The effects of MyD88 deficiency on disease phenotype in dysferlin-deficient A/J mice: role of endogenous TLR ligands.; J Pathol, 231: 199-209 |
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GSE46420 |
| Ubina, Teresa et al. (2019) A Human Embryonic Stem Cell Model of Aβ-Dependent Chronic Progressive Neurodegeneration.; Front Neurosci, 13: 1007 |
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GSE119527 |
| Uccellini, Melissa B et al. (2020) Passenger Mutations Confound Phenotypes of SARM1-Deficient Mice.; Cell Rep, 31: 107498 |
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GSE136221 |
| Uchida, Kenzo et al. (2010) Microarray analysis of expression of cell death-associated genes in rat spinal cord cells exposed to cyclic tensile stresses in vitro.; BMC Neurosci, 11: 84 |
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GSE22791 |
| Uchiyama, Akihiko et al. (2019) SOX2 Epidermal Overexpression Promotes Cutaneous Wound Healing via Activation of EGFR/MEK/ERK Signaling Mediated by EGFR Ligands.; J Invest Dermatol, 139: 1809-1820.e8 |
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GSE118859 |
| Udawant, Shreya et al. (2021) PI3K Pathway Inhibition with NVP-BEZ235 Hinders Glycolytic Metabolism in Glioblastoma Multiforme Cells.; Cells, 10: [no pages] |
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GSE179667 |
| Uddin, Shahab et al. (2011) Genome-wide expression analysis of Middle Eastern colorectal cancer reveals FOXM1 as a novel target for cancer therapy.; Am J Pathol, 178: 537-47 |
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GSE23878 |
| Udeochu, Joe C et al. (2023) Tau activation of microglial cGAS-IFN reduces MEF2C-mediated cognitive resilience.; Nat Neurosci, 26: 737-750 |
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GSE226380.2 GSE226380.1 |
| Ueda, Yuto et al. (2011) Hippocampal gene network analysis suggests that coral calcium hydride may reduce accelerated senescence in mice.; Nutr Res, 31: 863-72 |
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GSE31606 |
| Ueda, Yuto et al. (2012) Effect of zonisamide co-administration with levodopa on global gene expression in the striata of rats with Parkinson's disease.; Biochem Biophys Res Commun, 428: 401-4 |
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GSE39980 |
| Ueda, Yuto et al. (2013) Hippocampal gene expression profiling in a rat model of posttraumatic epilepsy reveals temporal upregulation of lipid metabolism-related genes.; Neurochem Res, [no vol.]: [no pages] |
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GSE40490 |
| Ueha, R et al. (2021) ACE2, TMPRSS2, and Furin expression in the nose and olfactory bulb in mice and humans.; Rhinology, 59: 105-109 |
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GSE150694 |
| Uehara, Taisuke et al. (2017) Selective degradation of splicing factor CAPERα by anticancer sulfonamides.; Nat Chem Biol, 13: 675-680 |
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GSE93829 |
| Uehara, Yoshihiko et al. (2010) Gene expression profiles in mouse liver after long-term low-dose-rate irradiation with gamma rays.; Radiat Res, 174: 611-7 |
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GSE20562 |