List of all 20,076 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Xia, Zhangchuan et al. (2025) The PURB-HOTAIR complex regulates p53-dependent promoter-specific transcriptional activation.; Nat Struct Mol Biol, 32: 1669-1682 |
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GSE295588 |
| Xian, Wa et al. (2005) Pleiotropic effects of FGFR1 on cell proliferation, survival, and migration in a 3D mammary epithelial cell model.; J Cell Biol, 171: 663-73 |
|
GSE3260 |
| Xian, Weiwei et al. (2021) Deficiency of Intellectual Disability-Related GeneBrpf1Attenuated Hippocampal Excitatory Synaptic Transmission and Impaired Spatial Learning and Memory Ability.; Front Cell Dev Biol, 9: 711792 |
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GSE174600 |
| Xiang, Guangxin et al. (2007) Identification of activity-dependent gene expression profiles reveals specific subsets of genes induced by different routes of Ca(2+) entry in cultured rat cortical neurons.; J Cell Physiol, 212: 126-36 |
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GSE6254 |
| Xiang, Jiawen et al. (2023) ATF4 May Be Essential for Adaption of the Ocular Lens to Its Avascular Environment.; Cells, 12: [no pages] |
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GSE206760 |
| Xiang, Yangfei et al. (2017) Fusion of Regionally Specified hPSC-Derived Organoids Models Human Brain Development and Interneuron Migration.; Cell Stem Cell, 21: 383-398.e7 |
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GSE97881 |
| Xiang, Yangfei et al. (2020) Dysregulation of BRD4 Function Underlies the Functional Abnormalities of MeCP2 Mutant Neurons.; Mol Cell, 79: 84-98.e9 |
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GSE117511 |
| Xiao, Guanxi et al. (2022) IL-17/CXCL5 signaling within the oligovascular niche mediates human and mouse white matter injury.; Cell Rep, 41: 111848 |
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GSE217354 GSE217355 |
| Xiao, Hui et al. (2025) Suppression of 6-pyruvoyl-tetrahydropterin synthase promotes remyelination in multiple sclerosis.; BMC Med, 23: 618 |
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GSE251827 |
| Xiao, Jianchun et al. (2011) Differential effects of three canonical Toxoplasma strains on gene expression in human neuroepithelial cells.; Infect Immun, 79: 1363-73 |
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GSE22986 |
| Xiao, Le et al. (2013) BMP signaling specifies the development of a large and fast CNS synapse.; Nat Neurosci, 16: 856-64 |
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GSE46500 |
| Xiao, Ling et al. (2024) m6A mRNA methylation in brown fat regulates systemic insulin sensitivity via an inter-organ prostaglandin signaling axis independent of UCP1.; Cell Metab, 36: 2207-2227.e9 |
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GSE232491.1 GSE232491.2 |
| Xiao, Mei-Fang et al. (2021) A biomarker-authenticated model of schizophrenia implicating NPTX2 loss of function.; Sci Adv, 7: eabf6935 |
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GSE150671 |
| Xiao, Mei-Sheng et al. (2024) Genome-scale exon perturbation screens uncover exons critical for cell fitness.; Mol Cell, 84: 2553-2572.e19 |
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GSE244340 |
| Xiao, Mu et al. (2024) Smad4 sequestered in SFPQ condensates prevents TGF-β tumor-suppressive signaling.; Dev Cell, 59: 48-63.e8 |
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GSE236125 |
| Xiao, Peng et al. (2008) In vivo genome-wide expression study on human circulating B cells suggests a novel ESR1 and MAPK3 network for postmenopausal osteoporosis.; J Bone Miner Res, 23: 644-54 |
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GSE7429 |
| Xiao, Sheng et al. (2014) Small-molecule ROR?t antagonists inhibit T helper 17 cell transcriptional network by divergent mechanisms.; Immunity, 40: 477-89 |
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GSE56240 |
| Xiao, Wenzhong et al. (2011) A genomic storm in critically injured humans.; J Exp Med, 208: 2581-90 |
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GSE36809 |
| Xiao, Xing et al. (2021) Orexin receptors 1 and 2 in serotonergic neurons differentially regulate peripheral glucose metabolism in obesity.; Nat Commun, 12: 5249 |
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GSE168203 |
| Xiao, Yang et al. (2023) STING mediates hepatocyte pyroptosis in liver fibrosis by Epigenetically activating the NLRP3 inflammasome.; Redox Biol, 62: 102691 |
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GSE217363 |
| Xiao, Ying-Ying et al. (2024) Cardiopulmonary progenitors facilitate cardiac repair via exosomal transfer of miR-27b-3p targeting the SIK1-CREB1 axis.; Cell Prolif, 57: e13593 |
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GSE232989 GSE232665 |
| Xicoy, Helena et al. (2020) Explorative Combined Lipid and Transcriptomic Profiling of Substantia Nigra and Putamen in Parkinson's Disease.; Cells, 9: [no pages] |
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GSE136666 |
| Xie, Guojia et al. (2023) MLL3/MLL4 methyltransferase activities control early embryonic development and embryonic stem cell differentiation in a lineage-selective manner.; Nat Genet, 55: 693-705 |
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GSE154475 |
| Xie, Huafeng et al. (2014) Polycomb repressive complex 2 regulates normal hematopoietic stem cell function in a developmental-stage-specific manner.; Cell Stem Cell, 14: 68-80 |
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GSE51084 |
| Xie, Huimin et al. (2017) Chromatin status and transcription factor binding to gonadotropin promoters in gonadotrope cell lines.; Reprod Biol Endocrinol, 15: 86 |
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GSE104513 |
| Xie, Jianjiang et al. (2020) GPD1 Enhances the Anticancer Effects of Metformin by Synergistically Increasing Total Cellular Glycerol-3-Phosphate.; Cancer Res, 80: 2150-2162 |
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GSE146982 |
| Xie, Junhua et al. (2023) Gut microbiota regulates blood-cerebrospinal fluid barrier function and Aβ pathology.; EMBO J, [no vol.]: e111515 |
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GSE228655 |
| Xie, Kan et al. (2017) Every-other-day feeding extends lifespan but fails to delay many symptoms of aging in mice.; Nat Commun, 8: 155 |
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GSE96644 |
| Xie, Kan et al. (2022) Deep phenotyping and lifetime trajectories reveal limited effects of longevity regulators on the aging process in C57BL/6J mice.; Nat Commun, 13: 6830 |
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GSE168068 |
| Xie, Lili et al. (2023) The oncomodulin receptor ArmC10 enables axon regeneration in mice after nerve injury and neurite outgrowth in human iPSC-derived sensory neurons.; Sci Transl Med, 15: eadg6241 |
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GSE221489 |
| Xie, Man-Xiu et al. (2025) Histone lactylation regulates DOCK4 to control heat nociception and supports Dynein-mediated Nav1.7 trafficking.; Nat Commun, 16: 7165 |
|
GSE283287 |
| Xie, Ning et al. (2021) In vitro expanded skeletal myogenic progenitors from pluripotent stem cell-derived teratomas have high engraftment capacity.; Stem Cell Reports, 16: 2900-2912 |
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GSE182508 |
| Xie, Qi et al. (2016) RBPJ maintains brain tumor-initiating cells through CDK9-mediated transcriptional elongation.; J Clin Invest, 126: 2757-72 |
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GSE79735 |
| Xie, Qi et al. (2018) N6-methyladenine DNA Modification in Glioblastoma.; Cell, 175: 1228-1243.e20 |
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GSE117632 |
| Xie, Shu-Tao et al. (2023) Proinflammatory activation of microglia in the cerebellum hyperexcites Purkinje cells to trigger ataxia.; Pharmacol Res, 191: 106773 |
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GSE221991 |
| Xie, Wenhui et al. (2022) Single-Cell RNA Sequencing and Assay for Transposase-Accessible Chromatin Using Sequencing Reveals Cellular and Molecular Dynamics of Aortic Aging in Mice.; Arterioscler Thromb Vasc Biol, 42: 156-171 |
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GSE164585 |
| Xie, Xiaomei et al. (2023) SRSF2 in Sertoli cells is essential for testicular development and spermatogenesis in mice.; FASEB J, 37: e22918 |
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GSE218969 |
| Xie, Xiaomei et al. (2024) PARN Maintains RNA Stability to Regulate Insulin Maturation and GSIS in Pancreatic β Cells.; Adv Sci (Weinh), 11: e2407774 |
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GSE248389 |
| Xie, Xin et al. (2018) β-actin regulates a heterochromatin landscape essential for optimal induction of neuronal programs during direct reprograming.; PLoS Genet, 14: e1007846 |
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GSE113733 |
| Xie, Xuemei et al. (2023) Maternal Embryonic Leucine Zipper Kinase is Associated with Metastasis in Triple-negative Breast Cancer.; Cancer Res Commun, 3: 1078-1092 |
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GSE227774 |
| Xie, Xuqin et al. (2023) APR-246 Enhances Colorectal Cancer Sensitivity to Radiotherapy.; Mol Cancer Ther, 22: 947-961 |
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GSE232305 |
| Xie, Yajun et al. (2025) Astrocyte specification in the mouse septum is shaped by both developmental origin and local signals.; Nat Neurosci, 28: 1676-1687 |
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GSE281480 |
| Xie, Yang et al. (2011) Robust gene expression signature from formalin-fixed paraffin-embedded samples predicts prognosis of non-small-cell lung cancer patients.; Clin Cancer Res, 17: 5705-14 |
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GSE29013 |
| Xie, Yuan et al. (2014) Defining the role of oxygen tension in human neural progenitor fate.; Stem Cell Reports, 3: 743-57 |
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GSE61842 |
| Xie, Yuanyuan et al. (2017) Lef1-dependent hypothalamic neurogenesis inhibits anxiety.; PLoS Biol, 15: e2002257 |
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GSE98519.1 |
| Xie, Yuanyuan et al. (2018) COP1/DET1/ETS axis regulates ERK transcriptome and sensitivity to MAPK inhibitors.; J Clin Invest, 128: 1442-1457 |
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GSE80352 |
| Xie, Zhixin et al. (2025) Critical role of Oas1g and STAT1 pathways in neuroinflammation: insights for Alzheimer's disease therapeutics.; J Transl Med, 23: 182 |
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GSE261007 |
| Xie, Zhuojun et al. (2025) Bilayer Heterogeneous Methacrylated Silk Fibroin Scaffold with Antibacterial and Osteoinductive Functions for Treating Infectious Bone Defects.; ACS Appl Mater Interfaces, 17: 58045-58063 |
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GSE308538 |
| Xin, Frances et al. (2018) Mice exposed to bisphenol A exhibit depressive-like behavior with neurotransmitter and neuroactive steroid dysfunction.; Horm Behav, 102: 93-104 |
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GSE102849 |
| Xin, Yanling et al. (2022) m6A epitranscriptomic modification regulates neural progenitor-to-glial cell transition in the retina.; Elife, 11: [no pages] |
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GSE180813 |
| Xin, Yu et al. (2025) 6-Hydroxygenistein Ameliorates High Altitude Brain Injury via Activating PI3K/AKT Signaling Pathway Based on Transcriptomic Analysis and Experimental Validation.; Drug Des Devel Ther, 19: 8641-8656 |
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GSE307180 |
| Xing, Chao et al. (2021) Biallelic variants in RNU12 cause CDAGS syndrome.; Hum Mutat, 42: 1042-1052 |
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GSE155099 |
| Xing, Lei et al. (2023) Autism-linked UBE3A gain-of-function mutation causes interneuron and behavioral phenotypes when inherited maternally or paternally in mice.; Cell Rep, 42: 112706 |
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GSE201731 |
| Xing, Luzhou et al. (2014) Alopecia areata is driven by cytotoxic T lymphocytes and is reversed by JAK inhibition.; Nat Med, 20: 1043-9 |
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GSE45551 GSE45514 |
| Xing, Mingming et al. (2024) Paraventricular hypothalamic RUVBL2 neurons suppress appetite by enhancing excitatory synaptic transmission in distinct neurocircuits.; Nat Commun, 15: 8939 |
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GSE252308 |
| Xiong, Feng et al. (2021) RNA m6A modification orchestrates a LINE-1-host interaction that facilitates retrotransposition and contributes to long gene vulnerability.; Cell Res, 31: 861-885 |
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GSE137752 |
| Xiong, Le et al. (2022) Oct4 differentially regulates chromatin opening and enhancer transcription in pluripotent stem cells.; Elife, 11: [no pages] |
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GSE174774.2 |
| Xiong, Shunbin et al. (2022) Differential Gain-of-Function Activity of Three p53 Hotspot Mutants In Vivo.; Cancer Res, 82: 1926-1936 |
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GSE198802 |
| Xiong, Yu-Quan et al. (2009) Human hepatocellular carcinoma tumor-derived endothelial cells manifest increased angiogenesis capability and drug resistance compared with normal endothelial cells.; Clin Cancer Res, 15: 4838-46 |
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GSE51401 |
| Xiong, Yuguang et al. (2017) A Comparison of mRNA Sequencing with Random Primed and 3'-Directed Libraries.; Sci Rep, 7: 14626 |
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GSE98428 |
| Xiong, Yunjie et al. (2026) PAD4 promotes macrophage migration to aggravate tubulointerstitial injury in diabetic kidney disease.; Mol Ther, 34: 511-526 |
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GSE279745 |
| Xu, An et al. (2023) Rewired m6A epitranscriptomic networks link mutant p53 to neoplastic transformation.; Nat Commun, 14: 1694 |
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GSE163088 |
| Xu, Baijie et al. (2025) Orthopediaregulates melanocortin 4 receptor transcription and energy homeostasis.; Sci Transl Med, 17: eadr6459 |
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GSE244791 |
| Xu, Bin et al. (2010) Multiple roles for the non-coding RNA SRA in regulation of adipogenesis and insulin sensitivity.; PLoS One, 5: e14199 |
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GSE21594 |
| Xu, Bin et al. (2013) Derepression of a neuronal inhibitor due to miRNA dysregulation in a schizophrenia-related microdeletion.; Cell, 152: 262-75 |
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GSE29767.2 GSE29767.1 |
| Xu, Cheng et al. (2021) TP53 wild-type/PPM1D mutant diffuse intrinsic pontine gliomas are sensitive to a MDM2 antagonist.; Acta Neuropathol Commun, 9: 178 |
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GSE189152 |
| Xu, Chenxi et al. (2021) Cistrome analysis of YY1 uncovers a regulatory axis of YY1:BRD2/4-PFKP during tumorigenesis of advanced prostate cancer.; Nucleic Acids Res, 49: 4971-4988 |
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GSE94013 |
| Xu, Chong et al. (2024) TaqTth-hpRNA: a novel compact RNA-targeting tool for specific silencing of pathogenic mRNA.; Genome Biol, 25: 179 |
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GSE236392 GSE269592 |
| Xu, Chuan et al. (2018) Human-specific features of spatial gene expression and regulation in eight brain regions.; Genome Res, 28: 1097-1110 |
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GSE100796 |
| Xu, Chunxiao et al. (2015) NSCLC Driven by DDR2 Mutation Is Sensitive to Dasatinib and JQ1 Combination Therapy.; Mol Cancer Ther, 14: 2382-9 |
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GSE64907 |
| Xu, Congling et al. (2019) Synergy between arsenic trioxide and JQ1 on autophagy in pancreatic cancer.; Oncogene, 38: 7249-7265 |
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GSE124069 |
| Xu, Cunshuan et al. (2011) Role of the autonomic nervous system in rat liver regeneration.; Cell Mol Neurobiol, 31: 527-40 |
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GSE26138 |
| Xu, Daniel C et al. (2024) Histone acetylation in an Alzheimer's disease cell model promotes homeostatic amyloid-reducing pathways.; Acta Neuropathol Commun, 12: 3 |
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GSE250567 |
| Xu, Fangfang et al. (2021) X-Ray Causes mRNA Transcripts Change to Enhance Orai2-Mediated Ca2+Influx in Rat Brain Microvascular Endothelial Cells.; Front Mol Biosci, 8: 646730 |
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GSE166073 |
| Xu, Gang et al. (2025) RBM10 deficiency promotes brain metastasis by modulating sphingolipid metabolism in a BBB model of EGFR mutant lung adenocarcinoma.; J Exp Clin Cancer Res, 44: 95 |
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GSE280915 |
| Xu, Haiming et al. (2016) NUP98 Fusion Proteins Interact with the NSL and MLL1 Complexes to Drive Leukemogenesis.; Cancer Cell, 30: 863-878 |
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GSE75997 |
| Xu, Haiyang et al. (2020) Role of Long Noncoding RNA Gas5 in Cocaine Action.; Biol Psychiatry, [no vol.]: [no pages] |
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GSE146005 |
| Xu, He Jax et al. (2023) Generation of functional posterior spinal motor neurons from hPSCs-derived human spinal cord neural progenitor cells.; Cell Regen, 12: 15 |
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GSE205718 |
| Xu, Huichun et al. (2011) Regional genome transcriptional response of adult mouse brain to hypoxia.; BMC Genomics, 12: 499 |
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GSE19709 |
| Xu, Huixin et al. (2021) Choroid plexus NKCC1 mediates cerebrospinal fluid clearance during mouse early postnatal development.; Nat Commun, 12: 447 |
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GSE138970 |
| Xu, Jian et al. (2011) Correction of sickle cell disease in adult mice by interference with fetal hemoglobin silencing.; Science, 334: 993-6 |
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GSE28333 |
| Xu, Jiaqi et al. (2023) Epithelial Gab1 calibrates RIPK3-dependent necroptosis to prevent intestinal inflammation.; JCI Insight, 8: [no pages] |
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GSE206868 |
| Xu, Jihao et al. (2024) Engrailed-1 Promotes Pancreatic Cancer Metastasis.; Adv Sci (Weinh), 11: e2308537 |
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GSE228804.1 GSE228804.2 |
| Xu, Jin et al. (2013) Dominant role of oncogene dosage and absence of tumor suppressor activity in Nras-driven hematopoietic transformation.; Cancer Discov, 3: 993-1001 |
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GSE43176 GSE33315 |
| Xu, Jinghui et al. (2023) The transcription factor Stat-1 is essential for Schwann cell differentiation, myelination and myelin sheath regeneration.; Mol Med, 29: 79 |
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GSE211336 |
| Xu, Jinghui et al. (2025) Voluntary exercise alleviates neural functional deficits in Parkinson's disease mice by inhibiting microglial ferroptosis via SLC7A11/ALOX12 axis.; NPJ Parkinsons Dis, 11: 55 |
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GSE309457 |
| Xu, Jinhong et al. (2023) Generation of neural organoids for spinal-cord regeneration via the direct reprogramming of human astrocytes.; Nat Biomed Eng, 7: 253-269 |
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GSE168635 |
| Xu, Jinyun et al. (2025) Loss of YTHDC1 m6A reading function promotes invasiveness in urothelial carcinoma of the bladder.; Exp Mol Med, 57: 118-130 |
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GSE266223 |
| Xu, Jun et al. (2020) Blockade of IL-17 signaling reverses alcohol-induced liver injury and excessive alcohol drinking in mice.; JCI Insight, 5: [no pages] |
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GSE137228 |
| Xu, Lei et al. (2008) Gene expression changes in an animal melanoma model correlate with aggressiveness of human melanoma metastases.; Mol Cancer Res, 6: 760-9 |
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GSE8401 GSE7929 GSE7956 |