List of all 21,870 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Ueno, Kazuko et al. (2016) Transition of differential histone H3 methylation in photoreceptors and other retinal cells during retinal differentiation.; Sci Rep, 6: 29264 |
|
GSE71462 GSE71463 |
| Ufartes, Roser et al. (2013) Behavioural and functional characterization of Kv10.1 (Eag1) knockout mice.; Hum Mol Genet, 22: 2247-62 |
|
GSE44110 |
| Ugalde, Maria Vera et al. (2023) Localized molecular chaperone synthesis maintains neuronal dendrite proteostasis.; Res Sq, [no vol.]: [no pages] |
|
GSE202202 |
| Ugale, Amol et al. (2014) Hematopoietic stem cells are intrinsically protected against MLL-ENL-mediated transformation.; Cell Rep, 9: 1246-55 |
|
GSE62734 |
| Uhde, Ann-Kathrin et al. (2018) Intact interleukin-10 receptor signaling protects from hippocampal damage elicited by experimental neurotropic virus infection of SJL mice.; Sci Rep, 8: 6106 |
|
GSE103698 |
| Uhlitz, Florian et al. (2017) An immediate-late gene expression module decodes ERK signal duration.; Mol Syst Biol, 13: 928 |
|
GSE93610 GSE72919 |
| Uittenbogaard, Martine et al. (2010) NeuroD6 genomic signature bridging neuronal differentiation to survival via the molecular chaperone network.; J Neurosci Res, [no vol.]: [no pages] |
|
GSE15942 |
| Ulicevic, Jelena et al. (2024) Uncovering the dynamics and consequences of RNA isoform changes during neuronal differentiation.; Mol Syst Biol, 20: 767-798 |
|
GSE245323 |
| Ulirsch, Jacob C et al. (2016) Systematic Functional Dissection of Common Genetic Variation Affecting Red Blood Cell Traits.; Cell, 165: 1530-1545 |
|
GSE70531 |
| Ulisse, Valeria et al. (2020) Regulation of axonal morphogenesis by the mitochondrial protein Efhd1.; Life Sci Alliance, 3: [no pages] |
|
GSE146756 |
| Ullah, Ubaid et al. (2012) Gene set enrichment analysis identifies LIF as a negative regulator of human Th2 cell differentiation.; Sci Rep, 2: 464 |
|
GSE16022 |
| Ulland, Tyler K et al. (2017) TREM2 Maintains Microglial Metabolic Fitness in Alzheimer's Disease.; Cell, 170: 649-663.e13 |
|
GSE98563 |
| Ulleryd, Marcus A et al. (2020) RNA sequencing data describing transcriptional changes in aorta of ApoE-/- mice after alpha 7 nicotinic acetylcholine receptor (α7nAChR) stimulation.; Data Brief, 30: 105415 |
|
GSE131162 |
| Ullman, Julie C et al. (2020) Brain delivery and activity of a lysosomal enzyme using a blood-brain barrier transport vehicle in mice.; Sci Transl Med, 12: [no pages] |
|
GSE139000 GSE139001 |
| Ulloa Severino, Francesco Paolo et al. (2023) Training-induced circuit-specific excitatory synaptogenesis in mice is required for effort control.; Nat Commun, 14: 5522 |
|
GSE257869 GSE169392 |
| Ulloa-Montoya, Fernando et al. (2013) Predictive gene signature in MAGE-A3 antigen-specific cancer immunotherapy.; J Clin Oncol, 31: 2388-95 |
|
GSE35640 |
| Ulluwishewa, Dulantha et al. (2015) Live Faecalibacterium prausnitzii in an apical anaerobic model of the intestinal epithelial barrier.; Cell Microbiol, 17: 226-40 |
|
GSE49900 |
| Ulmasov, Barbara et al. (2013) Differences in the degree of cerulein-induced chronic pancreatitis in C57BL/6 mouse substrains lead to new insights in identification of potential risk factors in the development of chronic pancreatitis.; Am J Pathol, 183: 692-708 |
|
GSE41418 |
| Ulmke, Pauline Antonie et al. (2021) Molecular Profiling Reveals Involvement of ESCO2 in Intermediate Progenitor Cell Maintenance in the Developing Mouse Cortex.; Stem Cell Reports, 16: 968-984 |
|
GSE168298 |
| Ulrich, Jason D et al. (2018) ApoE facilitates the microglial response to amyloid plaque pathology.; J Exp Med, 215: 1047-1058 |
|
GSE109906 |
| Ulrich-Lai, Yvonne M et al. (2010) Pleasurable behaviors reduce stress via brain reward pathways.; Proc Natl Acad Sci U S A, 107: 20529-34 |
|
GSE20344 |
| Ulschmid, Caden M et al. (2024) Disruption of DNA methylation-mediated cranial neural crest proliferation and differentiation causes orofacial clefts in mice.; Proc Natl Acad Sci U S A, 121: e2317668121 |
|
GSE250370 |
| Umansky, Kfir Baruch et al. (2015) Genomic-wide transcriptional profiling in primary myoblasts reveals Runx1-regulated genes in muscle regeneration.; Genom Data, 6: 120-2 |
|
GSE55556 GSE68998 |
| Umbaugh, Charles S et al. (2025) Selective targeting of TBXT with DARPins identifies regulatory networks and therapeutic vulnerabilities in chordoma.; Sci Adv, 11: eadu2796 |
|
GSE276715 |
| Umeda, Katsutsugu et al. (2015) Long-term expandable SOX9+ chondrogenic ectomesenchymal cells from human pluripotent stem cells.; Stem Cell Reports, 4: 712-26 |
|
GSE64752 |
| Umei, Tomohiko C et al. (2017) Single-Construct Polycistronic Doxycycline-Inducible Vectors Improve Direct Cardiac Reprogramming and Can Be Used to Identify the Critical Timing of Transgene Expression.; Int J Mol Sci, 18: [no pages] |
|
GSE101578 |
| Umei, Tomohiko C et al. (2025) Serine synthesis pathway regulates cardiac differentiation from human pluripotent stem cells.; iScience, 28: 112843 |
|
GSE290355 |
| Umemura, S et al. (2009) Overexpression of E2F-5 correlates with a pathological basal phenotype and a worse clinical outcome.; Br J Cancer, 100: 764-71 |
|
GSE6367 |
| Umemura, Yasuhiro et al. (2014) Transcriptional program of Kpna2/Importin-?2 regulates cellular differentiation-coupled circadian clock development in mammalian cells.; Proc Natl Acad Sci U S A, 111: E5039-48 |
|
GSE61184 GSE61096 |
| Umschweif, Gali et al. (2021) Identification of Neurensin-2 as a novel modulator of emotional behavior.; Mol Psychiatry, 26: 2872-2885 |
|
GSE141481 GSE141483 |
| Une, Hayato et al. (2021) Brain gray matter astroglia-specific connexin 43 ablation attenuates spinal cord inflammatory demyelination.; J Neuroinflammation, 18: 126 |
|
GSE148931 GSE148929 |
| Ung, D C et al. (2018) Ptchd1 deficiency induces excitatory synaptic and cognitive dysfunctions in mouse.; Mol Psychiatry, 23: 1356-1367 |
|
GSE80312 |
| Ung, Kevin et al. (2021) Olfactory bulb astrocytes mediate sensory circuit processing through Sox9 in the mouse brain.; Nat Commun, 12: 5230 |
|
GSE180841 |
| Unger, M S et al. (2020) CD8+T-cells infiltrate Alzheimer's disease brains and regulate neuronal- and synapse-related gene expression in APP-PS1 transgenic mice.; Brain Behav Immun, [no vol.]: [no pages] |
|
GSE149661 |
| Unnisa, Zeenath et al. (2012) Meis1 preserves hematopoietic stem cells in mice by limiting oxidative stress.; Blood, 120: 4973-81 |
|
GSE41133 |
| Unno, Keiko et al. (2014) Preventive Effect of Soybean on Brain Aging and Amyloid-β Accumulation: Comprehensive Analysis of Brain Gene Expression.; Recent Pat Food Nutr Agric, 7: 83-91 |
|
GSE58811 |
| Unno, Keiko et al. (2020) Theanine, the Main Amino Acid in Tea, Prevents Stress-Induced Brain Atrophy by Modifying Early Stress Responses.; Nutrients, 12: [no pages] |
|
GSE120546 |
| Uno, Yoko et al. (2025) O-GlcNAcylation on serine 40 of histone H2A promotes proliferation and invasion in triple-negative breast cancer.; Sci Rep, 15: 10170 |
|
GSE274331 |
| Unruh, Dusten et al. (2015) Red Blood Cell Dysfunction Induced by High-Fat Diet: Potential Implications for Obesity-Related Atherosclerosis.; Circulation, 132: 1898-908 |
|
GSE50240 |
| Ural, Basak B et al. (2020) Identification of a nerve-associated, lung-resident interstitial macrophage subset with distinct localization and immunoregulatory properties.; Sci Immunol, 5: [no pages] |
|
GSE146681 |
| Urata, Yuri Nagamine et al. (2014) Calcitriol supplementation effects on Ki67 expression and transcriptional profile of breast cancer specimens from post-menopausal patients.; Clin Nutr, 33: 136-42 |
|
GSE35925 |
| Uray, Karen S et al. (2010) Nuclear factor-kappaB activation by edema inhibits intestinal contractile activity.; Crit Care Med, 38: 861-70 |
|
GSE13193 |
| Urbach, Laura et al. (2025) TP53missense-specific transcriptional plasticity drives resistance against cell cycle inhibitors in pancreatic cancer.; Sci Adv, 11: eadu2339 |
|
GSE291033 |
| Urban, Inga et al. (2019) TIP60/KAT5 is required for neuronal viability in hippocampal CA1.; Sci Rep, 9: 16173 |
|
GSE139298 |
| Urban, Stina L et al. (2020) Peripherally induced brain tissue-resident memory CD8+T cells mediate protection against CNS infection.; Nat Immunol, 21: 938-949 |
|
GSE146077 |
| Urbanski, Laura et al. (2022) MYC regulates a pan-cancer network of co-expressed oncogenic splicing factors.; Cell Rep, 41: 111704 |
|
GSE181968 |
| Urbanucci, Alfonso et al. (2017) Androgen Receptor Deregulation Drives Bromodomain-Mediated Chromatin Alterations in Prostate Cancer.; Cell Rep, 19: 2045-2059 |
|
GSE73930 |
| Urdinguio, Rocio G et al. (2008) Mecp2-null mice provide new neuronal targets for Rett syndrome.; PLoS One, 3: e3669 |
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GSE11596 |
| Uren, Philip J et al. (2014) A profile of transcriptomic changes in the rd10 mouse model of retinitis pigmentosa.; Mol Vis, 20: 1612-28 |
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GSE56473 |
| Uren, Philip J et al. (2015) RNA-Binding Protein Musashi1 Is a Central Regulator of Adhesion Pathways in Glioblastoma.; Mol Cell Biol, 35: 2965-78 |
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GSE68800 |
| Uribesalgo, Iris et al. (2011) E-box-independent regulation of transcription and differentiation by MYC.; Nat Cell Biol, 13: 1443-9 |
|
GSE24731 |
| Uronis, Joshua M et al. (2012) Histological and molecular evaluation of patient-derived colorectal cancer explants.; PLoS One, 7: e38422 |
|
GSE35144 |
| Urquidi, Virginia et al. (2012) A candidate molecular biomarker panel for the detection of bladder cancer.; Cancer Epidemiol Biomarkers Prev, 21: 2149-58 |
|
GSE31189 |
| Urresti, Jorge et al. (2021) Correction: Cortical organoids model early brain development disrupted by 16p11.2 copy number variants in autism.; Mol Psychiatry, [no vol.]: [no pages] |
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GSE142174 |
| Urso, Maria L et al. (2006) Analysis of human skeletal muscle after 48 h immobilization reveals alterations in mRNA and protein for extracellular matrix components.; J Appl Physiol (1985), 101: 1136-48 |
|
GSE5110 |
| Usenko, Tatiana et al. (2021) Comparative Transcriptome Analysis in Monocyte-Derived Macrophages of AsymptomaticGBAMutation Carriers and Patients with GBA-Associated Parkinson's Disease.; Genes (Basel), 12: [no pages] |
|
GSE184956 |
| Uslu, Veli Vural et al. (2014) Long-range enhancers regulating Myc expression are required for normal facial morphogenesis.; Nat Genet, 46: 753-8 |
|
GSE52974 |
| Ustaoglu, Ahsen et al. (2022) Identification of novel immune cell signature in gastroesophageal reflux disease: altered mucosal mast cells and dendritic cell profile.; Front Immunol, 14: 1282577 |
|
GSE226303 |
| Usui, Noriyoshi et al. (2017) Foxp1 regulation of neonatal vocalizations via cortical development.; Genes Dev, 31: 2039-2055 |
|
GSE98913.2 |
| Usui, Noriyoshi et al. (2021) Early Life Stress Alters Gene Expression and Cytoarchitecture in the Prefrontal Cortex Leading to Social Impairment and Increased Anxiety.; Front Genet, 12: 754198 |
|
GSE180055 |
| Usui, Noriyoshi et al. (2021) Zbtb16 regulates social cognitive behaviors and neocortical development.; Transl Psychiatry, 11: 242 |
|
GSE155424 |
| Usui, Noriyoshi et al. (2026) Copper deficiency impairs oligodendrocyte maturation and social behavior via mitophagy and mTOR suppression in ASD.; Sci Adv, 12: eadz3398 |
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GSE232864 |
| Utami, Kagistia Hana et al. (2020) Integrative Analysis Identifies Key Molecular Signatures Underlying Neurodevelopmental Deficits in Fragile X Syndrome.; Biol Psychiatry, 88: 500-511 |
|
GSE117248 |
| Utz, Sebastian G et al. (2020) Early Fate Defines Microglia and Non-parenchymal Brain Macrophage Development.; Cell, 181: 557-573.e18 |
|
GSE146928 |
| Uyhelji, Hilary A et al. (2018) Exploring gene expression biomarker candidates for neurobehavioral impairment from total sleep deprivation.; BMC Genomics, 19: 341 |
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GSE98564 GSE98565 GSE98566 |
| Uzonyi, Barbara et al. (2006) Cysteinyl leukotriene 2 receptor and protease-activated receptor 1 activate strongly correlated early genes in human endothelial cells.; Proc Natl Acad Sci U S A, 103: 6326-31 |
|
GSE3589 |
| Vacher, Claire-Marie et al. (2021) Placental endocrine function shapes cerebellar development and social behavior.; Nat Neurosci, [no vol.]: [no pages] |
|
GSE173440 |
| Vadasz, Csaba et al. (2007) Glutamate receptor metabotropic 7 is cis-regulated in the mouse brain and modulates alcohol drinking.; Genomics, 90: 690-702 |
|
GSE7155 |
| Vadodaria, Krishna C et al. (2019) Altered serotonergic circuitry in SSRI-resistant major depressive disorder patient-derived neurons.; Mol Psychiatry, 24: 808-818 |
|
GSE126512 |
| Vadodaria, Krishna C et al. (2019) Serotonin-induced hyperactivity in SSRI-resistant major depressive disorder patient-derived neurons.; Mol Psychiatry, 24: 795-807 |
|
GSE125664 |
| Vadodaria, Krishna C et al. (2021) Altered Neuronal Support and Inflammatory Response in Bipolar Disorder Patient-Derived Astrocytes.; Stem Cell Reports, 16: 825-835 |
|
GSE157509 |
| Vaganova, Anastasia N et al. (2024) Knocking Out TAAR5: A Pathway to Enhanced Neurogenesis and Dopamine Signaling in the Striatum.; Cells, 13: [no pages] |
|
GSE276664 |
| Vagena, Eirini et al. (2019) A high-fat diet promotes depression-like behavior in mice by suppressing hypothalamic PKA signaling.; Transl Psychiatry, 9: 141 |
|
GSE127056 |
| Vagena, Eirini et al. (2022) ASB4 modulates central melanocortinergic neurons and calcitonin signaling to control satiety and glucose homeostasis.; Sci Signal, 15: eabj8204 |
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GSE139148 |
| Vagnozzi, Alicia N et al. (2020) Phrenic-specific transcriptional programs shape respiratory motor output.; Elife, 9: [no pages] |
|
GSE138085 |
| Vahedi, Golnaz et al. (2012) STATs shape the active enhancer landscape of T cell populations.; Cell, 151: 981-93 |
|
GSE40463 |
| Vahedi, Golnaz et al. (2015) Super-enhancers delineate disease-associated regulatory nodes in T cells.; Nature, 520: 558-62 |
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GSE60482.1 GSE60482.2 |
| Vahey, Maryanne T et al. (2002) Impact of viral infection on the gene expression profiles of proliferating normal human peripheral blood mononuclear cells infected with HIV type 1 RF.; AIDS Res Hum Retroviruses, 18: 179-92 |
|
GSE511 |
| Vahey, Maryanne T et al. (2008) CD4+ T-cell decline after the interruption of antiretroviral therapy in ACTG A5170 is predicted by differential expression of genes in the ras signaling pathway.; AIDS Res Hum Retroviruses, 24: 1047-66 |
|
GSE10924 |
| Vahsen, Björn F et al. (2022) Human iPSC co-culture model to investigate the interaction between microglia and motor neurons.; Sci Rep, 12: 12606 |
|
GSE200037 |
| Vahsen, Björn F et al. (2023) C9orf72-ALS human iPSC microglia are pro-inflammatory and toxic to co-cultured motor neurons via MMP9.; Nat Commun, 14: 5898 |
|
GSE217625 |
| Vahsen, Björn Friedhelm et al. (2020) Inhibition of the autophagic protein ULK1 attenuates axonal degeneration in vitro and in vivo, enhances translation, and modulates splicing.; Cell Death Differ, 27: 2810-2827 |
|
GSE123687 |
| Vaid, Samir et al. (2018) A novel population of Hopx-dependent basal radial glial cells in the developing mouse neocortex.; Development, 145: [no pages] |
|
GSE121008 |
| Vainchtein, Ilia D et al. (2018) Astrocyte-derived interleukin-33 promotes microglial synapse engulfment and neural circuit development.; Science, 359: 1269-1273 |
|
GSE109353 GSE109352 |
| Vainchtein, Ilia D et al. (2023) Characterizing microglial gene expression in a model of secondary progressive multiple sclerosis.; Glia, 71: 588-601 |
|
GSE194071 |
| Vainorius, Gintautas et al. (2023) Ascl1 and Ngn2 convert mouse embryonic stem cells to neurons via functionally distinct paths.; Nat Commun, 14: 5341 |
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GSE208199 GSE206870 |
| Vaishnav, Radhika A et al. (2008) Cellular and molecular characterization of oxidative stress in olfactory epithelium of Harlequin mutant mouse.; J Neurosci Res, 86: 165-82 |
|
GSE6485 |