List of all 20,326 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Woodruff, Prescott G et al. (2005) A distinctive alveolar macrophage activation state induced by cigarette smoking.; Am J Respir Crit Care Med, 172: 1383-92 |
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GSE2125 |
| Woodruff, Prescott G et al. (2007) Genome-wide profiling identifies epithelial cell genes associated with asthma and with treatment response to corticosteroids.; Proc Natl Acad Sci U S A, 104: 15858-63 |
|
GSE4302 |
| Woods, Christopher W et al. (2013) A host transcriptional signature for presymptomatic detection of infection in humans exposed to influenza H1N1 or H3N2.; PLoS One, 8: e52198 |
|
GSE52428 |
| Woods, Courtney G et al. (2009) Dose-dependent transitions in Nrf2-mediated adaptive response and related stress responses to hypochlorous acid in mouse macrophages.; Toxicol Appl Pharmacol, 238: 27-36 |
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GSE15457 |
| Woolley, Phillip R et al. (2024) Regulation of transcription patterns, poly(ADP-ribose), and RNA-DNA hybrids by the ATM protein kinase.; Cell Rep, 43: 113896 |
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GSE233479 |
| Worgall, Stefan et al. (2005) Similarity of gene expression patterns in human alveolar macrophages in response to Pseudomonas aeruginosa and Burkholderia cepacia.; Infect Immun, 73: 5262-8 |
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GSE12245 |
| Workman, Michael J et al. (2017) Engineered human pluripotent-stem-cell-derived intestinal tissues with a functional enteric nervous system.; Nat Med, 23: 49-59 |
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GSE84666 |
| Works, Melissa et al. (2019) Anti-B-cell Maturation Antigen Chimeric Antigen Receptor T cell Function against Multiple Myeloma Is Enhanced in the Presence of Lenalidomide.; Mol Cancer Ther, 18: 2246-2257 |
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GSE113281 |
| Wormald, Samuel et al. (2006) The comparative roles of suppressor of cytokine signaling-1 and -3 in the inhibition and desensitization of cytokine signaling.; J Biol Chem, 281: 11135-43 |
|
GSE4232 |
| Woroniecka, Karolina I et al. (2011) Transcriptome analysis of human diabetic kidney disease.; Diabetes, 60: 2354-69 |
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GSE30122 |
| Wortham, Matthew et al. (2023) Nutrient regulation of the islet epigenome controls adaptive insulin secretion.; J Clin Invest, 133: [no pages] |
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GSE134901.2 GSE134901.1 |
| Wotton, S et al. (2008) Gene array analysis reveals a common Runx transcriptional programme controlling cell adhesion and survival.; Oncogene, 27: 5856-66 |
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GSE11732 |
| Wozniak, Emily A L et al. (2021) Cholecystokinin 1 receptor activation restores normal mTORC1 signaling and is protective to Purkinje cells of SCA mice.; Cell Rep, 37: 109831 |
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GSE180969 |
| Wozniak, Magdalena B et al. (2013) Integrative genome-wide gene expression profiling of clear cell renal cell carcinoma in Czech Republic and in the United States.; PLoS One, 8: e57886 |
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GSE40435 |
| Wozniak, Michele A et al. (2012) Adhesion regulates MAP kinase/ternary complex factor exchange to control a proliferative transcriptional switch.; Curr Biol, 22: 2017-26 |
|
GSE26640 |
| Wrage, Michaela et al. (2009) Genomic profiles associated with early micrometastasis in lung cancer: relevance of 4q deletion.; Clin Cancer Res, 15: 1566-74 |
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GSE10799 |
| Wragg, Joseph W et al. (2017) Sunitinib Treatment Enhances Metastasis of Innately Drug-Resistant Breast Tumors.; Cancer Res, 77: 1008-1020 |
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GSE84048 |
| Wray, Jonathan R et al. (2019) Global transcriptomic analysis of the arcuate nucleus following chronic glucocorticoid treatment.; Mol Metab, 26: 5-17 |
|
GSE128148 |
| Wright, Austin P et al. (2024) Interferon regulatory factor 6 (IRF6) determines intestinal epithelial cell development and immunity.; Mucosal Immunol, 17: 633-650 |
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GSE245970 |
| Wright, C et al. (2017) Altered expression of histamine signaling genes in autism spectrum disorder.; Transl Psychiatry, 7: e1126 |
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GSE102741 |
| Wright, Casey M et al. (2010) ADAM28: a potential oncogene involved in asbestos-related lung adenocarcinomas.; Genes Chromosomes Cancer, 49: 688-98 |
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GSE20875 |
| Wright, Casey M et al. (2012) MS4A1 dysregulation in asbestos-related lung squamous cell carcinoma is due to CD20 stromal lymphocyte expression.; PLoS One, 7: e34943 |
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GSE23822 |
| Wright, Christina M et al. (2020) Dlx1/2 mice have abnormal enteric nervous system function.; JCI Insight, 5: [no pages] |
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GSE145362 |
| Wright, Hollis et al. (2021) Polycomb represses a gene network controlling puberty via modulation of histone demethylase Kdm6b expression.; Sci Rep, 11: 1996 |
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GSE102471 |
| Wright, Jerry M et al. (2004) Gene expression profile analysis of 4-phenylbutyrate treatment of IB3-1 bronchial epithelial cell line demonstrates a major influence on heat-shock proteins.; Physiol Genomics, 16: 204-11 |
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GSE620 |
| Wright, Jerry M et al. (2006) Respiratory epithelial gene expression in patients with mild and severe cystic fibrosis lung disease.; Am J Respir Cell Mol Biol, 35: 327-36 |
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GSE2395 |
| Wright, Shaela et al. (2023) Interrogating bromodomain inhibitor resistance in KMT2A-rearranged leukemia through combinatorial CRISPR screens.; Proc Natl Acad Sci U S A, 120: e2220134120 |
|
GSE201137 |
| Wright, T M et al. (2009) Ror2, a developmentally regulated kinase, promotes tumor growth potential in renal cell carcinoma.; Oncogene, 28: 2513-23 |
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GSE12114 |
| Wu, Bin et al. (2024) Meningeal neutrophil immune signaling influences behavioral adaptation following threat.; Neuron, [no vol.]: [no pages] |
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GSE276662 |
| Wu, Bo et al. (2012) Gene expression changes induced by unilateral ureteral obstruction in mice.; J Urol, 188: 1033-41 |
|
GSE36496 |
| Wu, Chen-Chi et al. (2020) Altered expression of genes regulating inflammation and synaptogenesis during regrowth of afferent neurons to cochlear hair cells.; PLoS One, 15: e0238578 |
|
GSE130495 |
| Wu, Chenwei et al. (2026) SMARCA4 promotes lineage plasticity and enzalutamide resistance in prostate cancer by regulating PROX1 via H3K27 acetylation.; Cell Death Discov, 12: [no pages] |
|
GSE318884 |
| Wu, Chia-Ling et al. (2011) Identification of genes that elicit disuse muscle atrophy via the transcription factors p50 and Bcl-3.; PLoS One, 6: e16171 |
|
GSE23497 |
| Wu, Chia-Lung et al. (2021) Single cell transcriptomic analysis of human pluripotent stem cell chondrogenesis.; Nat Commun, 12: 362 |
|
GSE160786 |
| Wu, Chong et al. (2020) Myeloid signature reveals immune contexture and predicts the prognosis of hepatocellular carcinoma.; J Clin Invest, 130: 4679-4693 |
|
GSE134921 |
| Wu, Chunlei et al. (2008) Gene set enrichment in eQTL data identifies novel annotations and pathway regulators.; PLoS Genet, 4: e1000070 |
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GSE8028 |
| Wu, Dan et al. (2024) Exploration on pharmacological mechanisms of YZP against neuropathic pain via inhibiting spinal inflammation and the rationality of its compatibility.; J Ethnopharmacol, 331: 118316 |
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GSE245768 |
| Wu, Feng et al. (2007) Genome-wide gene expression differences in Crohn's disease and ulcerative colitis from endoscopic pinch biopsies: insights into distinctive pathogenesis.; Inflamm Bowel Dis, 13: 807-21 |
|
GSE6731 |
| Wu, Guangsen et al. (2024) Oxytocin attenuates hypothalamic injury-induced cognitive dysfunction by inhibiting hippocampal ERK signaling and Aβ deposition.; Transl Psychiatry, 14: 208 |
|
GSE229838 |
| Wu, Hai et al. (2014) Genomic occupancy of Runx2 with global expression profiling identifies a novel dimension to control of osteoblastogenesis.; Genome Biol, 15: R52 |
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GSE53982 |
| Wu, Hao et al. (2012) Central role of lactic acidosis in cancer cell resistance to glucose deprivation-induced cell death.; J Pathol, 227: 189-99 |
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GSE25525 |
| Wu, Jia Qian et al. (2010) Dynamic transcriptomes during neural differentiation of human embryonic stem cells revealed by short, long, and paired-end sequencing.; Proc Natl Acad Sci U S A, 107: 5254-9 |
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GSE20301 |
| Wu, Jiayi et al. (2024) Transcriptomic and cellular decoding of scaffolds-induced suture mesenchyme regeneration.; Int J Oral Sci, 16: 33 |
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GSE249260 |
| Wu, Jinghai et al. (2022) Stromal p53 Regulates Breast Cancer Development, the Immune Landscape, and Survival in an Oncogene-Specific Manner.; Mol Cancer Res, 20: 1233-1246 |
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GSE201935 |
| Wu, Jingxia et al. (2019) Loss of Neurological Disease HSAN-I-Associated Gene SPTLC2 Impairs CD8+T Cell Responses to Infection by Inhibiting T Cell Metabolic Fitness.; Immunity, 50: 1218-1231.e5 |
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GSE112715 |
| Wu, Jun et al. (2012) Beige adipocytes are a distinct type of thermogenic fat cell in mouse and human.; Cell, 150: 366-76 |
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GSE39562 |
| Wu, Jun et al. (2020) Ependyma-expressed CCN1 restricts the size of the neural stem cell pool in the adult ventricular-subventricular zone.; EMBO J, 39: e101679 |
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GSE137852 |
| Wu, Junfang et al. (2013) TrkB.T1 contributes to neuropathic pain after spinal cord injury through regulation of cell cycle pathways.; J Neurosci, 33: 12447-63 |
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GSE47681 |
| Wu, Kang et al. (2012) An interferon-related signature in the transcriptional core response of human macrophages to Mycobacterium tuberculosis infection.; PLoS One, 7: e38367 |
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GSE29628 |
| Wu, Kongming et al. (2003) DACH1 inhibits transforming growth factor-beta signaling through binding Smad4.; J Biol Chem, 278: 51673-84 |
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GSE685 |
| Wu, Lai Man Natalie et al. (2022) Single-cell multiomics identifies clinically relevant mesenchymal stem-like cells and key regulators for MPNST malignancy.; Sci Adv, 8: eabo5442 |
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GSE178989 |
| Wu, Li et al. (2014) Orosomucoid1: Involved in vascular endothelial growth factor-induced blood-brain barrier leakage after ischemic stroke in mouse.; Brain Res Bull, 109: 88-98 |
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GSE58720 |
| Wu, Lijian et al. (2023) Tumor aerobic glycolysis confers immune evasion through modulating sensitivity to T cell-mediated bystander killing via TNF-α.; Cell Metab, 35: 1580-1596.e9 |
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GSE215107 |
| Wu, Lin et al. (2020) Niche-Selective Inhibition of Pathogenic Th17 Cells by Targeting Metabolic Redundancy.; Cell, 182: 641-654.e20 |
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GSE140422 |
| Wu, Ling et al. (2013) Human developmental chondrogenesis as a basis for engineering chondrocytes from pluripotent stem cells.; Stem Cell Reports, 1: 575-89 |
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GSE51812 |
| Wu, Longfei et al. (2025) Integrative analysis reveals synergistic regulation of Sp7 by BRD9 and Wnt/β-catenin signaling during osteogenic differentiation.; Commun Biol, 9: 23 |
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GSE308048 |
| Wu, Longtao et al. (2013) ERG is a critical regulator of Wnt/LEF1 signaling in prostate cancer.; Cancer Res, 73: 6068-79 |
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GSE47423 |
| Wu, Manya et al. (2020) Identification and validation of potential key long noncoding RNAs in sorafenib-resistant hepatocellular carcinoma cells.; PeerJ, 8: e8624 |
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GSE140202 |
| Wu, Meng-Ju et al. (2024) Mutant IDH1 inhibition induces dsDNA sensing to activate tumor immunity.; Science, 385: eadl6173 |
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GSE265829 GSE264723 GSE264725 |
| Wu, Ming-Tsang et al. (2011) Whole genome expression in peripheral-blood samples of workers professionally exposed to polycyclic aromatic hydrocarbons.; Chem Res Toxicol, 24: 1636-43 |
|
GSE30504 |
| Wu, Pei-Yi et al. (2014) Aryl hydrocarbon receptor downregulates MYCN expression and promotes cell differentiation of neuroblastoma.; PLoS One, 9: e88795 |
|
GSE53371 |
| Wu, Peihui et al. (2024) Hyperactive lateral habenula mediates the comorbidity between rheumatoid arthritis and depression-like behaviors.; Brain Behav Immun, 117: 412-427 |
|
GSE241929 |
| Wu, Qian et al. (2023) Renal control of life-threatening malarial anemia.; Cell Rep, 42: 112057 |
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GSE189579 |
| Wu, Rong et al. (2019) A novel m6A reader Prrc2a controls oligodendroglial specification and myelination.; Cell Res, 29: 23-41 |
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GSE100491 |
| Wu, Rong et al. (2024) Disruption of nuclear speckle integrity dysregulates RNA splicing in C9ORF72-FTD/ALS.; Neuron, 112: 3434-3451.e11 |
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GSE248404 |
| Wu, Rui et al. (2022) Physical exercise promotes integration of grafted cells and functional recovery in an acute stroke rat model.; Stem Cell Reports, 17: 276-288 |
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GSE190355 |
| Wu, Shwu-Yuan et al. (2020) Opposing Functions of BRD4 Isoforms in Breast Cancer.; Mol Cell, 78: 1114-1132.e10 |
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GSE136151 |
| Wu, Sulin et al. (2010) Upstream transcription factor 1 influences plasma lipid and metabolic traits in mice.; Hum Mol Genet, 19: 597-608 |
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GSE17442 |
| Wu, Tiffany et al. (2019) Complement C3 Is Activated in Human AD Brain and Is Required for Neurodegeneration in Mouse Models of Amyloidosis and Tauopathy.; Cell Rep, 28: 2111-2123.e6 |
|
GSE129770 |
| Wu, Tingyu et al. (2018) Co-inhibition of BET proteins and NF-κB as a potential therapy for colorectal cancer through synergistic inhibiting MYC and FOXM1 expressions.; Cell Death Dis, 9: 315 |
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GSE95513 |
| Wu, Tong et al. (2011) Reprogramming of trophoblast stem cells into pluripotent stem cells by Oct4.; Stem Cells, 29: 755-63 |
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GSE25255 |
| Wu, Wei et al. (2006) Glucocorticoid receptor activation signals through forkhead transcription factor 3a in breast cancer cells.; Mol Endocrinol, 20: 2304-14 |
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GSE4917 |
| Wu, Wei et al. (2008) Network analysis of temporal effects of intermittent and sustained hypoxia on rat lungs.; Physiol Genomics, 36: 24-34 |
|
GSE8705 |
| Wu, Wei et al. (2021) Neuronal enhancers are hotspots for DNA single-strand break repair.; Nature, 593: 440-444 |
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GSE167256 |
| Wu, Weihua et al. (2024) IL-10 protects against OPC ferroptosis by regulating lipid reactive oxygen species levels post stroke.; Redox Biol, 69: 102982 |
|
GSE222049 |
| Wu, Wenchao et al. (2022) Overcoming IMiD resistance in T-cell lymphomas through potent degradation of ZFP91 and IKZF1.; Blood, 139: 2024-2037 |
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GSE172505.3 |
| Wu, Wensi et al. (2021) Identification of the Potential Gene Regulatory Networks and Therapeutics in Aged Mice With Postoperative Neurocognitive Disorder.; Front Neurosci, 15: 689188 |
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GSE174412 |
| Wu, Xiaodi et al. (2013) Bcl11a controls Flt3 expression in early hematopoietic progenitors and is required for pDC development in vivo.; PLoS One, 8: e64800 |
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GSE46270 |
| Wu, Xiaofang et al. (2011) Glandular gene expression of sinus mucosa in chronic rhinosinusitis with and without cystic fibrosis.; Am J Respir Cell Mol Biol, 45: 525-33 |
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GSE10406 |
| Wu, Xiaoping et al. (2022) Synaptic hyperexcitability of cytomegalic pyramidal neurons contributes to epileptogenesis in tuberous sclerosis complex.; Cell Rep, 40: 111085 |
|
GSE156891 |
| Wu, Xin et al. (2011) Spermatogonial stem cell self-renewal requires ETV5-mediated downstream activation of Brachyury in mice.; Biol Reprod, 85: 1114-23 |
|
GSE30683 |
| Wu, Xinyu et al. (2013) Long chain fatty Acyl-CoA synthetase 4 is a biomarker for and mediator of hormone resistance in human breast cancer.; PLoS One, 8: e77060 |
|
GSE40968 |
| Wu, Xuan et al. (2026) PAN2 maintains mRNA poly(A) tail homeostasis and regulates translation during spermiogenesis in mice.; Nat Commun, 17: [no pages] |
|
GSE294418 |
| Wu, Xujia et al. (2024) Threonine fuels glioblastoma through YRDC-mediated codon-biased translational reprogramming.; Nat Cancer, [no vol.]: [no pages] |
|
GSE229671 |
| Wu, Xuxia et al. (2007) The effect of insulin on expression of genes and biochemical pathways in human skeletal muscle.; Endocrine, 31: 5-17 |
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GSE22309 |
| Wu, Y-H et al. (2013) COL11A1 promotes tumor progression and predicts poor clinical outcome in ovarian cancer.; Oncogene, [no vol.]: [no pages] |
|
GSE44104 |
| Wu, Yan-Jiao et al. (2023) Synaptic scaling of corticostriatal circuits underlies hyperactivity in GABA Transporter-1 deficient mice.; iScience, 26: 106322 |
|
GSE211419 |
| Wu, Yanming et al. (2018) Tamoxifen Resistance in Breast Cancer Is Regulated by the EZH2-ERα-GREB1 Transcriptional Axis.; Cancer Res, 78: 671-684 |
|
GSE103242 |
| Wu, Yingga et al. (2021) Very-low-protein diets lead to reduced food intake and weight loss, linked to inhibition of hypothalamic mTOR signaling, in mice.; Cell Metab, 33: 888-904.e6 |
|
GSE158215 |
| Wu, Yong et al. (2012) Nandrolone normalizes determinants of muscle mass and fiber type after spinal cord injury.; J Neurotrauma, 29: 1663-75 |
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GSE17959 |
| Wu, Yong et al. (2013) Electrical stimulation modulates Wnt signaling and regulates genes for the motor endplate and calcium binding in muscle of rats with spinal cord transection.; BMC Neurosci, 14: 81 |
|
GSE37476 |
| Wu, Yonghui et al. (2013) Comprehensive genomic meta-analysis identifies intra-tumoural stroma as a predictor of survival in patients with gastric cancer.; Gut, 62: 1100-11 |
|
GSE35809 |
| Wu, Zhihao et al. (2023) Functional and Transcriptomic Characterization of Postnatal Maturation of ENS and SIP Syncytium in Mice Colon.; Biomolecules, 13: [no pages] |
|
GSE186568 |
| Wubah, J A et al. (2001) Exposure-disease continuum for 2-chloro-2'-deoxyadenosine, a prototype ocular teratogen. 1. Dose-response analysis.; Teratology, 64: 154-69 |
|
GSE1069 |
| Wulansari, Noviana et al. (2021) Neurodevelopmental defects and neurodegenerative phenotypes in human brain organoids carrying Parkinson's disease-linkedDNAJC6mutations.; Sci Adv, 7: [no pages] |
|
GSE151190 |
| Wulfridge, Phillip et al. (2026) ADNP regulates chromatin architecture and lineage fidelity during neural differentiation.; PLoS Genet, 22: e1012081 |
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GSE303981 |
| Wurmbach, Elisa et al. (2007) Genome-wide molecular profiles of HCV-induced dysplasia and hepatocellular carcinoma.; Hepatology, 45: 938-47 |
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GSE6764 |