List of all 16,752 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Chen, Cho-Yi et al. (2016) Effects of aging on circadian patterns of gene expression in the human prefrontal cortex.; Proc Natl Acad Sci U S A, 113: 206-11 |
|
GSE71620 |
| Chen, Chu et al. (2008) Gene expression profiling identifies genes predictive of oral squamous cell carcinoma.; Cancer Epidemiol Biomarkers Prev, 17: 2152-62 |
|
GSE30784 |
| Chen, Chun-An et al. (2019) Nr2f1 heterozygous knockout mice recapitulate neurological phenotypes of Bosch-Boonstra-Schaaf optic atrophy syndrome and show impaired hippocampal synaptic plasticity.; Hum Mol Genet, [no vol.]: [no pages] |
|
GSE106302 |
| Chen, Ci-Di et al. (2015) The anti-aging and tumor suppressor protein Klotho enhances differentiation of a human oligodendrocytic hybrid cell line.; J Mol Neurosci, 55: 76-90 |
|
GSE51536 |
| Chen, Dan et al. (2023) CTLA-4 blockade induces a microglia-Th1 cell partnership that stimulates microglia phagocytosis and anti-tumor function in glioblastoma.; Immunity, 56: 2086-2104.e8 |
|
GSE233971 |
| Chen, Di et al. (2018) Influence of lipopolysaccharide on proinflammatory gene expression in human corneal, conjunctival and meibomian gland epithelial cells.; Ocul Surf, 16: 382-389 |
|
GSE111496 |
| Chen, Dung-Tsa et al. (2010) Proliferative genes dominate malignancy-risk gene signature in histologically-normal breast tissue.; Breast Cancer Res Treat, 119: 335-46 |
|
GSE10780 |
| Chen, E et al. (2009) Genome-wide transcriptional profiling linked to social class in asthma.; Thorax, 64: 38-43 |
|
GSE7894 |
| Chen, Fan et al. (2023) Polycomb deficiency drives a FOXP2-high aggressive state targetable by epigenetic inhibitors.; Nat Commun, 14: 336 |
|
GSE154689.1 GSE154689.2 |
| Chen, Fang et al. (2011) Proinflammatory caspase-2-mediated macrophage cell death induced by a rough attenuated Brucella suis strain.; Infect Immun, 79: 2460-9 |
|
GSE21117 |
| Chen, Feng et al. (2010) Genes related to the very early stage of ConA-induced fulminant hepatitis: a gene-chip-based study in a mouse model.; BMC Genomics, 11: 240 |
|
GSE17184 |
| Chen, Fengrong et al. (2022) Quercetin Mitigates Methamphetamine-Induced Anxiety-Like Behavior Through Ameliorating Mitochondrial Dysfunction and Neuroinflammation.; Front Mol Neurosci, 15: 829886 |
|
GSE193829 |
| Chen, Gang et al. (2010) Foxa2 programs Th2 cell-mediated innate immunity in the developing lung.; J Immunol, 184: 6133-41 |
|
GSE19204 |
| Chen, Gang et al. (2013) Characterization of a novel CRAC inhibitor that potently blocks human T cell activation and effector functions.; Mol Immunol, 54: 355-67 |
|
GSE43210 |
| Chen, Gaowei et al. (2023) Distinct reward processing by subregions of the nucleus accumbens.; Cell Rep, 42: 112069 |
|
GSE222274 |
| Chen, Guiqin et al. (2017) Antidyskinetic Effects of MEK Inhibitor Are Associated with Multiple Neurochemical Alterations in the Striatum of Hemiparkinsonian Rats.; Front Neurosci, 11: 112 |
|
GSE93695 |
| Chen, Guo et al. (2014) Molecular profiling of patient-matched brain and extracranial melanoma metastases implicates the PI3K pathway as a therapeutic target.; Clin Cancer Res, 20: 5537-46 |
|
GSE50493 |
| Chen, Guo-Yan et al. (2020) Mediator Med23 Regulates Adult Hippocampal Neurogenesis.; Front Cell Dev Biol, 8: 699 |
|
GSE152113 |
| Chen, Hao et al. (2012) Transcript profiling identifies dynamic gene expression patterns and an important role for Nrf2/Keap1 pathway in the developing mouse esophagus.; PLoS One, 7: e36504 |
|
GSE34278 |
| Chen, Hao et al. (2019) Using a Multi-Stage hESC Model to Characterize BDE-47 Toxicity during Neurogenesis.; Toxicol Sci, [no vol.]: [no pages] |
|
GSE123458 |
| Chen, Haobin et al. (2023) BET Inhibitors Target the SCLC-N Subtype of Small-Cell Lung Cancer by Blocking NEUROD1 Transactivation.; Mol Cancer Res, 21: 91-101 |
|
GSE210101 |
| Chen, Holly Y et al. (2023) Reserpine maintains photoreceptor survival in retinal ciliopathy by resolving proteostasis imbalance and ciliogenesis defects.; Elife, 12: [no pages] |
|
GSE206959 |
| Chen, Hongjin et al. (2023) Multi-omics analysis revealed the role of CYP1A2 in the induction of mechanical allodynia in type 1 diabetes.; Front Genet, 14: 1151340 |
|
GSE226315 |
| Chen, Hongwei et al. (2015) Reinforcement of STAT3 activity reprogrammes human embryonic stem cells to naive-like pluripotency.; Nat Commun, 6: 7095 |
|
GSE55708 |
| Chen, Hsiao-Chi et al. (2024) Histone serotonylation regulates ependymoma tumorigenesis.; Nature, 632: 903-910 |
|
GSE246031 |
| Chen, Hsin-Fu et al. (2015) Characteristic expression of major histocompatibility complex and immune privilege genes in human pluripotent stem cells and their derivatives.; Cell Transplant, 24: 845-64 |
|
GSE28406 |
| Chen, Hui-Wen et al. (2024) Imbalance inUnc80RNA Editing Disrupts Dynamic Neuronal Activity and Olfactory Perception.; Int J Mol Sci, 25: [no pages] |
|
GSE269152 |
| Chen, Huiyi et al. (2008) The aged retinal pigment epithelium/choroid: a potential substratum for the pathogenesis of age-related macular degeneration.; PLoS One, 3: e2339 |
|
GSE10965 |
| Chen, Jasmine et al. (2021) Lineage-restricted neoplasia driven by Myc defaults to small cell lung cancer when combined with loss of p53 and Rb in the airway epithelium.; Oncogene, [no vol.]: [no pages] |
|
GSE161185 |
| Chen, Jefferson K et al. (2023) IRX5 promotes DNA damage repair and activation of hair follicle stem cells.; Stem Cell Reports, [no vol.]: [no pages] |
|
GSE202086 GSE202075 |
| Chen, Jennifer Y et al. (2017) Tricyclic Antidepressants Promote Ceramide Accumulation to Regulate Collagen Production in Human Hepatic Stellate Cells.; Sci Rep, 7: 44867 |
|
GSE78853 |
| Chen, Jessie et al. [Unknown date]BMP-Responsive Protease HtrA1 Is Differentially Expressed in Astrocytes and Regulates Astrocytic Development and Injury Response.; J Neurosci, 38: 3840-3857 |
|
GSE67942 |
| Chen, Jessy et al. (2021) CaM Kinase II-δ Is Required for Diabetic Hyperglycemia and Retinopathy but Not Nephropathy.; Diabetes, 70: 616-626 |
|
GSE157739 |
| Chen, Jian et al. (2013) Transcriptome comparison of human neurons generated using induced pluripotent stem cells derived from dental pulp and skin fibroblasts.; PLoS One, 8: e75682 |
|
GSE43143 |
| Chen, Jian et al. (2015) ZNF804A Transcriptional Networks in Differentiating Neurons Derived from Induced Pluripotent Stem Cells of Human Origin.; PLoS One, 10: e0124597 |
|
GSE54112 |
| Chen, Jian et al. [Unknown date]AXL promotes Zika virus infection in astrocytes by antagonizing type I interferon signalling.; Nat Microbiol, 3: 302-309 |
|
GSE106545 |
| Chen, Jiayang et al. (2021) A MYT1L syndrome mouse model recapitulates patient phenotypes and reveals altered brain development due to disrupted neuronal maturation.; Neuron, 109: 3775-3792.e14 |
|
GSE173926 |
| Chen, Jichao et al. (2007) Estrogen-related receptor beta/NR3B2 controls epithelial cell fate and endolymph production by the stria vascularis.; Dev Cell, 13: 325-37 |
|
GSE8434 |
| Chen, Jie et al. (2019) Acupuncture Treatment Reverses Retinal Gene Expression Induced by Optic Nerve Injury via RNA Sequencing Analysis.; Front Integr Neurosci, 13: 59 |
|
GSE131486 |
| Chen, Jie et al. (2020) Effects of Retinal Transcription Regulation After GB20 Needling Treatment in Retina With Optic Neuritis.; Front Integr Neurosci, 14: 568449 |
|
GSE148759 |
| Chen, Jie et al. (2025) Non-canonical hepatic androgen receptor mediates glucagon sensitivity in female mice through the PGC1α/ERRα/mitochondria axis.; Cell Rep, 44: 115188 |
|
GSE236551 |
| Chen, Jing et al. (2012) Retinal expression of Wnt-pathway mediated genes in low-density lipoprotein receptor-related protein 5 (Lrp5) knockout mice.; PLoS One, 7: e30203 |
|
GSE32145 |
| Chen, Jing et al. (2017) Cytokine receptor signaling is required for the survival of ALK- anaplastic large cell lymphoma, even in the presence of JAK1/STAT3 mutations.; Proc Natl Acad Sci U S A, 114: 3975-3980 |
|
GSE96048 |
| Chen, Jiwang et al. (2013) Linezolid Exerts Greater Bacterial Clearance but No Modification of Host Lung Gene Expression Profiling: A Mouse MRSA Pneumonia Model.; PLoS One, 8: e67994 |
|
GSE46071 |
| Chen, Julia Ling-Yu et al. (2008) The genomic analysis of lactic acidosis and acidosis response in human cancers.; PLoS Genet, 4: e1000293 |
|
GSE9649 |
| Chen, Jun et al. (2016) Hierarchical Oct4 Binding in Concert with Primed Epigenetic Rearrangements during Somatic Cell Reprogramming.; Cell Rep, 14: 1540-1554 |
|
GSE67462 |
| Chen, Justin et al. (2015) The genetics of splicing in neuroblastoma.; Cancer Discov, 5: 380-95 |
|
GSE55248 |
| Chen, Ke Yun et al. (2021) Adipocyte-Specific Ablation of PU.1 Promotes Energy Expenditure and Ameliorates Metabolic Syndrome in Aging Mice.; Front Aging, 2: 803482 |
|
GSE188497 |
| Chen, Kelan et al. (2015) Genome-wide binding and mechanistic analyses of Smchd1-mediated epigenetic regulation.; Proc Natl Acad Sci U S A, 112: E3535-44 |
|
GSE65747 |
| Chen, Kenian et al. (2013) RNA-seq characterization of spinal cord injury transcriptome in acute/subacute phases: a resource for understanding the pathology at the systems level.; PLoS One, 8: e72567 |
|
GSE45376 |
| Chen, Kuey-Chu et al. (2013) Glucocorticoid-dependent hippocampal transcriptome in male rats: pathway-specific alterations with aging.; Endocrinology, 154: 2807-20 |
|
GSE37618 |
| Chen, Lehua et al. (2025) The DNA demethylase TET1 modifies the impact of maternal folic acid status on embryonic brain development.; EMBO Rep, 26: 175-199 |
|
GSE275393 |
| Chen, Lei et al. (2023) High-throughput drug screening identifies fluoxetine as a potential therapeutic agent for neuroendocrine prostate cancer.; Front Oncol, 13: 1085569 |
|
GSE224715 |
| Chen, Lei et al. (2023) RBM4 dictates ESCC cell fate switch from cellular senescence to glutamine-addiction survival through inhibiting LKB1-AMPK-axis.; Signal Transduct Target Ther, 8: 159 |
|
GSE220613 |
| Chen, Li et al. (2010) Genome-wide analysis of YY2 versus YY1 target genes.; Nucleic Acids Res, 38: 4011-26 |
|
GSE14964 |
| Chen, Liang-Fu et al. (2020) The NMDA receptor subunit GluN3A regulates synaptic activity-induced and myocyte enhancer factor 2C (MEF2C)-dependent transcription.; J Biol Chem, 295: 8613-8627 |
|
GSE133917 |
| Chen, Lin et al. (2010) Positional differences in the wound transcriptome of skin and oral mucosa.; BMC Genomics, 11: 471 |
|
GSE23006 |
| Chen, Lin et al. (2015) MeCP2 binds to non-CG methylated DNA as neurons mature, influencing transcription and the timing of onset for Rett syndrome.; Proc Natl Acad Sci U S A, 112: 5509-14 |
|
GSE66870 |
| Chen, Linfeng et al. (2013) SYK inhibition modulates distinct PI3K/AKT- dependent survival pathways and cholesterol biosynthesis in diffuse large B cell lymphomas.; Cancer Cell, 23: 826-38 |
|
GSE34176 |
| Chen, Ling et al. (2021) Pten is a key intrinsic factor regulating raphe 5-HT neuronal plasticity and depressive behaviors in mice.; Transl Psychiatry, 11: 186 |
|
GSE164610 |
| Chen, Liying et al. (2018) CRISPR-Cas9 screen reveals a MYCN-amplified neuroblastoma dependency on EZH2.; J Clin Invest, 128: 446-462 |
|
GSE85431 |
| Chen, Lu et al. (2014) Human neural precursor cells promote neurologic recovery in a viral model of multiple sclerosis.; Stem Cell Reports, 2: 825-37 |
|
GSE56187 |
| Chen, Lu et al. (2023) ANGPTL2 binds MAG to efficiently enhance oligodendrocyte differentiation.; Cell Biosci, 13: 42 |
|
GSE199393 |
| Chen, Lunhao et al. (2022) mTOR-neuropeptide Y signaling sensitizes nociceptors to drive neuropathic pain.; JCI Insight, 7: [no pages] |
|
GSE184014 |
| Chen, Miaomiao et al. (2023) Endocannabinoid biosynthetic enzymes regulate pain response via LKB1-AMPK signaling.; Proc Natl Acad Sci U S A, 120: e2304900120 |
|
GSE249312 |
| Chen, Minghui Jessica et al. (2011) A global transcriptomic view of the multifaceted role of glutathione peroxidase-1 in cerebral ischemic-reperfusion injury.; Free Radic Biol Med, 50: 736-48 |
|
GSE23163 |
| Chen, Muwan et al. (2020) Rapid generation of regionally specified CNS neurons by sequential patterning and conversion of human induced pluripotent stem cells.; Stem Cell Res, 48: 101945 |
|
GSE149864 |
| Chen, Nan et al. (2021) Maternal obesity interrupts the coordination of the unfolded protein response and heat shock response in the postnatal developing hypothalamus of male offspring in mice.; Mol Cell Endocrinol, 527: 111218 |
|
GSE162744 |
| Chen, Patrick B et al. (2017) Mapping Gene Expression in Excitatory Neurons during Hippocampal Late-Phase Long-Term Potentiation.; Front Mol Neurosci, 10: 39 |
|
GSE79790 |
| Chen, Peiwen et al. (2020) Circadian Regulator CLOCK Recruits Immune-Suppressive Microglia into the GBM Tumor Microenvironment.; Cancer Discov, 10: 371-381 |
|
GSE140409 |
| Chen, Pengxiang et al. (2022) Olfactory sensory experience regulates gliomagenesis via neuronal IGF1.; Nature, 606: 550-556 |
|
GSE159427 GSE189940 |
| Chen, Qian et al. (2022) LYL1 facilitates AETFC assembly and gene activation by recruiting CARM1 in t(8;21) AML.; Proc Natl Acad Sci U S A, 119: e2213718119 |
|
GSE207233 |
| Chen, Qiqi et al. (2023) ZIKV infection differentially affects the transcriptional profiles in HTR8 and U251 cells.; Virus Res, 334: 199166 |
|
GSE234128 |
| Chen, Quanhai et al. (2010) An association between gene expression and better survival in female mice following myocardial infarction.; J Mol Cell Cardiol, 49: 801-11 |
|
GSE23294 |
| Chen, Renchao et al. (2022) Cell type-specific mechanism of Setd1a heterozygosity in schizophrenia pathogenesis.; Sci Adv, 8: eabm1077 |
|
GSE181024 GSE181021.2 GSE181021.1 |
| Chen, Renrui et al. (2024) Circadian-driven tissue specificity is constrained under caloric restricted feeding conditions.; Commun Biol, 7: 752 |
|
GSE240689 |
| Chen, Rong et al. (2010) Differentially expressed RNA from public microarray data identifies serum protein biomarkers for cross-organ transplant rejection and other conditions.; PLoS Comput Biol, 6: [no pages] |
|
GSE14328 |
| Chen, Rui et al. (2023) CircTmeff1 Promotes Muscle Atrophy by Interacting with TDP-43 and Encoding A Novel TMEFF1-339aa Protein.; Adv Sci (Weinh), 10: e2206732 |
|
GSE205537 |
| Chen, Rui et al. (2024) Citrullination modulation stabilizes HIF-1α to promote tumour progression.; Nat Commun, 15: 7654 |
|
GSE233772 |
| Chen, Shaoxuan et al. (2021) Temporarily Epigenetic Repression in Bergmann Glia Regulates the Migration of Granule Cells.; Adv Sci (Weinh), 8: 2003164 |
|
GSE155871 |
| Chen, Sheng-Wen et al. (2025) ECM29/proteasome-mediated self-antigen generation by CNS-resident neuroglia promotes regulatory T cell activation.; Cell Rep, 44: 115161 |
|
GSE251784 |
| Chen, Shuibing et al. (2021) SARS-CoV-2 Infection Causes Dopaminergic Neuron Senescence.; Res Sq, [no vol.]: [no pages] |
|
GSE174745.2 GSE174745.1 |
| Chen, Shuyi et al. (2013) Defective FGF signaling causes coloboma formation and disrupts retinal neurogenesis.; Cell Res, 23: 254-73 |
|
GSE41260 |
| Chen, Siwei et al. (2020) Metabolomic and transcriptomic signatures of prenatal excessive methionine support nature rather than nurture in schizophrenia pathogenesis.; Commun Biol, 3: 409 |
|
GSE153195 |
| Chen, Tian et al. (2015) ADAR1 is required for differentiation and neural induction by regulating microRNA processing in a catalytically independent manner.; Cell Res, 25: 459-76 |
|
GSE56152.2 |
| Chen, Ting et al. (2016) Liver kinase B1 inhibits the expression of inflammation-related genes postcontraction in skeletal muscle.; J Appl Physiol (1985), 120: 876-88 |
|
GSE72352 |
| Chen, Tong et al. (2015) m(6)A RNA methylation is regulated by microRNAs and promotes reprogramming to pluripotency.; Cell Stem Cell, 16: 289-301 |
|
GSE52125 |
| Chen, Tzu-Yu et al. (2024) Mature neurons from iPSCs unveil neurodegeneration-related pathways in mucopolysaccharidosis type II: GSK-3β inhibition for therapeutic potential.; Cell Death Dis, 15: 302 |
|
GSE202344 |
| Chen, Vincent C et al. (2008) Notch signaling respecifies the hemangioblast to a cardiac fate.; Nat Biotechnol, 26: 1169-78 |
|
GSE12425 |
| Chen, Wei-Yang et al. (2021) Transcriptomics identifies STAT3 as a key regulator of hippocampal gene expression and anhedonia during withdrawal from chronic alcohol exposure.; Transl Psychiatry, 11: 298 |
|
GSE171051 |
| Chen, Wei-Yi et al. (2013) A TAF4 coactivator function for E proteins that involves enhanced TFIID binding.; Genes Dev, 27: 1596-609 |
|
GSE46807 |
| Chen, Weili et al. (2008) Malignant transformation initiated by Mll-AF9: gene dosage and critical target cells.; Cancer Cell, 13: 432-40 |
|
GSE10627 |
| Chen, Weirong et al. (2023) SLE Antibody-Secreting Cells Are Characterized by Enhanced Peripheral Maturation and Survival Programs.; Res Sq, [no vol.]: [no pages] |
|
GSE235658 |
| Chen, Weiwei et al. (2022) The PLAUR signaling promotes chronic pruritus.; FASEB J, 36: e22368 |
|
GSE189333 |