List of all 16,752 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Chen, Weiyi et al. (2023) Nutrient-sensing AgRP neurons relay control of liver autophagy during energy deprivation.; Cell Metab, 35: 786-806.e13 |
|
GSE188472 |
| Chen, Wen et al. (2021) Fetal growth restriction impairs hippocampal neurogenesis and cognition via Tet1 in offspring.; Cell Rep, 37: 109912 |
|
GSE143816 |
| Chen, Xi et al. (2014) XBP1 promotes triple-negative breast cancer by controlling the HIF1? pathway.; Nature, 508: 103-7 |
|
GSE49953 |
| Chen, Xi et al. (2021) Distinct Persistence Fate of Mycobacterium tuberculosis in Various Types of Cells.; mSystems, 6: e0078321 |
|
GSE125907.2 GSE125907.1 |
| Chen, Xi et al. (2023) circGLS2 inhibits hepatocellular carcinoma recurrence via regulating hsa-miR-222-3p-PTEN-AKT signaling.; Signal Transduct Target Ther, 8: 67 |
|
GSE182593 |
| Chen, Xia et al. (2022) Catalytic Subunit of Protein Phosphatase 2A (PP2Ac) Influences the Meiosis Initiation During Spermatocyte Meiosis Prophase I.; Reprod Sci, 29: 3201-3211 |
|
GSE181132 |
| Chen, Xiameng et al. (2020) Comparative Transcriptomic Analyses of Developing Melanocortin Neurons Reveal New Regulators for the Anorexigenic Neuron Identity.; J Neurosci, 40: 3165-3177 |
|
GSE146816 |
| Chen, Xiang et al. (2021) RHAMMB-mediated bifunctional nanotherapy targeting Bcl-xL and mitochondria for pancreatic neuroendocrine tumor treatment.; Mol Ther Oncolytics, 23: 277-287 |
|
GSE200497 |
| Chen, Xiao-Yu et al. (2021) The m6A Reader YTHDF1 Facilitates the Tumorigenesis and Metastasis of Gastric Cancer via USP14 Translation in an m6A-Dependent Manner.; Front Cell Dev Biol, 9: 647702 |
|
GSE166972 |
| Chen, Xiaoying et al. [Unknown date]The Transcriptional Regulator SnoN Promotes the Proliferation of Cerebellar Granule Neuron Precursors in the Postnatal Mouse Brain.; J Neurosci, 39: 44-62 |
|
GSE120279 |
| Chen, Xin et al. (2004) Novel endothelial cell markers in hepatocellular carcinoma.; Mod Pathol, 17: 1198-210 |
|
GSE3500 |
| Chen, Xinjian et al. (2013) Pathways analysis of differential gene expression induced by engrafting doses of total body irradiation for allogeneic bone marrow transplantation in mice.; Immunogenetics, 65: 597-607 |
|
GSE43310 |
| Chen, Xinpu et al. (2012) COUP-TFII is a major regulator of cell cycle and Notch signaling pathways.; Mol Endocrinol, 26: 1268-77 |
|
GSE33301 |
| Chen, Xue et al. (2024) CARM1 hypermethylates the NuRD chromatin remodeling complex to promote cell cycle gene expression and breast cancer development.; Nucleic Acids Res, 52: 6811-6829 |
|
GSE209909 |
| Chen, Xuefen et al. (2012) Requirement for the histone deacetylase Hdac3 for the inflammatory gene expression program in macrophages.; Proc Natl Acad Sci U S A, 109: E2865-74 |
|
GSE33162 |
| Chen, Xuelian et al. (2023) Different immunological mechanisms between AQP4 antibody-positive and MOG antibody-positive optic neuritis based on RNA sequencing analysis of whole blood.; Front Immunol, 14: 1095966 |
|
GSE226808 |
| Chen, Xuemei et al. [Unknown date]Phf8 histone demethylase deficiency causes cognitive impairments through the mTOR pathway.; Nat Commun, 9: 114 |
|
GSE107210 |
| Chen, Xueqin et al. (2023) IDH1 mutation impairs antiviral response and potentiates oncolytic virotherapy in glioma.; Nat Commun, 14: 6781 |
|
GSE208634 |
| Chen, Xuewen et al. (2023) In vivo protein turnover rates in varying oxygen tensions nominate MYBBP1A as a mediator of the hyperoxia response.; Sci Adv, 9: eadj4884 |
|
GSE234123 |
| Chen, Y G et al. (2013) Temporal induction of immunoregulatory processes coincides with age-dependent resistance to viral-induced type 1 diabetes.; Genes Immun, 14: 387-400 |
|
GSE40497 |
| Chen, Yan-Yan et al. (2022) Combination of paeoniflorin and liquiritin alleviates neuropathic pain by lipid metabolism and calcium signaling coordination.; Front Pharmacol, 13: 944386 |
|
GSE205906 |
| Chen, Yanqing et al. (2008) Variations in DNA elucidate molecular networks that cause disease.; Nature, 452: 429-35 |
|
GSE2814 GSE3086 |
| Chen, Yanting et al. (2023) Blood-brain barrier dysfunction and Alzheimer's disease: associations, pathogenic mechanisms, and therapeutic potential.; Front Aging Neurosci, 15: 1258640 |
|
GSE272179 |
| Chen, Yaoyu et al. (2013) Targeting HSF1 sensitizes cancer cells to HSP90 inhibition.; Oncotarget, 4: 816-29 |
|
GSE44867 |
| Chen, Ye et al. (2019) Bromodomain and extraterminal proteins foster the core transcriptional regulatory programs and confer vulnerability in liposarcoma.; Nat Commun, 10: 1353 |
|
GSE111252 |
| Chen, Yelin et al. (2014) Activity-induced Nr4a1 regulates spine density and distribution pattern of excitatory synapses in pyramidal neurons.; Neuron, 83: 431-443 |
|
GSE76805 |
| Chen, Yelin et al. (2014) Regulation of neuronal gene expression and survival by basal NMDA receptor activity: a role for histone deacetylase 4.; J Neurosci, 34: 15327-39 |
|
GSE54708 |
| Chen, Yi A et al. (2022) In vivo genome editing using novel AAV-PHP variants rescues motor function deficits and extends survival in a SOD1-ALS mouse model.; Gene Ther, [no vol.]: 1-12 |
|
GSE213125 |
| Chen, Yi-Guang et al. (2014) Molecular signatures differentiate immune states in Type 1 diabetes families.; Diabetes, [no vol.]: [no pages] |
|
GSE52724 |
| Chen, Yi-Wen et al. (2002) Response of rat muscle to acute resistance exercise defined by transcriptional and translational profiling.; J Physiol, 545: 27-41 |
|
GSE467 |
| Chen, Yi-Wen et al. (2007) Transcriptional pathways associated with skeletal muscle disuse atrophy in humans.; Physiol Genomics, 31: 510-20 |
|
GSE8872 |
| Chen, Yi-Wen et al. (2008) Duration of chronic inflammation alters gene expression in muscle from untreated girls with juvenile dermatomyositis.; BMC Immunol, 9: 43 |
|
GSE11971 |
| Chen, Yifang et al. (2015) SOX2 expression inhibits terminal epidermal differentiation.; Exp Dermatol, 24: 974-6 |
|
GSE68073 |
| Chen, Yifei et al. (2024) LINC00894 Regulates Cerebral Ischemia/Reperfusion Injury by Stabilizing EIF5 and Facilitating ATF4-Mediated Induction of FGF21 and ACOD1 Expression.; Neurochem Res, 49: 2910-2925 |
|
GSE268399 |
| Chen, Ying et al. (2023) Huangqi decoction ameliorates kidney injury in db/db mice by regulating the BMP/Smad signaling pathway.; BMC Complement Med Ther, 23: 209 |
|
GSE225477 |
| Chen, Ying-Jiun J et al. [Unknown date]Single-cell RNA sequencing identifies distinct mouse medial ganglionic eminence cell types.; Sci Rep, 7: 45656 |
|
GSE94579 |
| Chen, YingJie et al. (2003) Alterations of gene expression in failing myocardium following left ventricular assist device support.; Physiol Genomics, 14: 251-60 |
|
GSE430 |
| Chen, Yiran et al. (2022) CRISPR screens uncover protective effect of PSTK as a regulator of chemotherapy-induced ferroptosis in hepatocellular carcinoma.; Mol Cancer, 21: 11 |
|
GSE182185 |
| Chen, Yong et al. (2022) Chinese herbal formula (GCNY)-medicated serum alleviates peroxidation induced by H2O2in human microglial cells.; Front Neurosci, 16: 990040 |
|
GSE210945 |
| Chen, Yonghong et al. (2023) Hierarchical Phosphorylation of HOXB13 by mTOR Dictates Its Activity and Oncogenic Function in Prostate Cancer.; Mol Cancer Res, 21: 1050-1063 |
|
GSE225205 GSE225206 |
| Chen, Youwei et al. (2023) Short C-terminal Musashi-1 proteins regulate pluripotency states in embryonic stem cells.; Cell Rep, 42: 113308 |
|
GSE197608.1 GSE197608.2 |
| Chen, Yu et al. (2013) ETS factors reprogram the androgen receptor cistrome and prime prostate tumorigenesis in response to PTEN loss.; Nat Med, 19: 1023-9 |
|
GSE46329 GSE46799 GSE46360 |
| Chen, Yu et al. (2024) The Ednrb-Aim2-AKT axis regulates neural crest-derived melanoblast proliferation during early development.; Development, 151: [no pages] |
|
GSE275956 |
| Chen, Yu et al. [Unknown date]Synergistically acting agonists and antagonists of G protein-coupled receptors prevent photoreceptor cell degeneration.; Sci Signal, 9: ra74 |
|
GSE79061 |
| Chen, Yu-Chen et al. (2019) A NeuroD1 AAV-Based Gene Therapy for Functional Brain Repair after Ischemic Injury through In Vivo Astrocyte-to-Neuron Conversion.; Mol Ther, [no vol.]: [no pages] |
|
GSE135981 |
| Chen, Yu-Jung et al. (2024) Gliocidin is a nicotinamide-mimetic prodrug that targets glioblastoma.; Nature, 636: 466-473 |
|
GSE277301.1 GSE277301.2 |
| Chen, Yuanyuan et al. (2024) Oral 8-aminoguanine against age-related retinal degeneration.; Res Sq, [no vol.]: [no pages] |
|
GSE254123 |
| Chen, Yue-Feng et al. (2012) Regulation of gene expression with thyroid hormone in rats with myocardial infarction.; PLoS One, 7: e40161 |
|
GSE35088 |
| Chen, Yun-Ti et al. (2023) Transcriptomic analysis of World Trade Center particulate Matter-induced pulmonary inflammation and drug treatments.; Environ Int, 177: 108027 |
|
GSE217456 |
| Chen, Yung-Che et al. (2013) Peripheral immune cell gene expression changes in advanced non-small cell lung cancer patients treated with first line combination chemotherapy.; PLoS One, 8: e57053 |
|
GSE39345 |
| Chen, Zhang-Peng et al. (2023) Lipid-accumulated reactive astrocytes promote disease progression in epilepsy.; Nat Neurosci, 26: 542-554 |
|
GSE197015.2 GSE197015.1 GSE197015.3 GSE224494 |
| Chen, Zhe et al. (2021) Nuclear DEK preserves hematopoietic stem cells potential via NCoR1/HDAC3-Akt1/2-mTOR axis.; J Exp Med, 218: [no pages] |
|
GSE166431 |
| Chen, Zhen et al. (2021) Cochlear Sox2+Glial Cells Are Potent Progenitors for Spiral Ganglion Neuron Reprogramming Induced by Small Molecules.; Front Cell Dev Biol, 9: 728352 |
|
GSE169042 |
| Chen, Zhi Xiong et al. (2014) RNA helicase A is a downstream mediator of KIF1B? tumor-suppressor function in neuroblastoma.; Cancer Discov, 4: 434-51 |
|
GSE44585 |
| Chen, Zhuo et al. (2024) Histone lactylation mediated by Fam172a in POMC neurons regulates energy balance.; Nat Commun, 15: 10111 |
|
GSE280694 |
| Chen, Zhuoxin et al. (2024) Increased enhancer-promoter interactions during developmental enhancer activation in mammals.; Nat Genet, 56: 675-685 |
|
GSE217078 |
| Chen, Ziyan et al. (2014) FGF signaling activates a Sox9-Sox10 pathway for the formation and branching morphogenesis of mouse ocular glands.; Development, 141: 2691-701 |
|
GSE54796 |
| Chen-Plotkin, Alice S et al. (2008) Variations in the progranulin gene affect global gene expression in frontotemporal lobar degeneration.; Hum Mol Genet, 17: 1349-62 |
|
GSE13162 |
| Chendamarai, Ezhilarasi et al. (2015) Comparison of newly diagnosed and relapsed patients with acute promyelocytic leukemia treated with arsenic trioxide: insight into mechanisms of resistance.; PLoS One, 10: e0121912 |
|
GSE42030 |
| Cheng, Bi-Hua et al. (2010) Microarray studies on effects of Pneumocystis carinii infection on global gene expression in alveolar macrophages.; BMC Microbiol, 10: 103 |
|
GSE20149 |
| Cheng, Bo et al. (2024) Comparison of human pluripotent stem cell differentiation protocols to generate neuroblastoma tumors.; Sci Rep, 14: 23050 |
|
GSE264211 |
| Cheng, Cheng et al. (2018) Characterization of a Mouse Model of Börjeson-Forssman-Lehmann Syndrome.; Cell Rep, 25: 1404-1414.e6 |
|
GSE119973 |
| Cheng, Chi-Keung et al. (2023) Deep genomic characterization highlights complexities and prognostic markers of pediatric acute myeloid leukemia.; Commun Biol, 6: 356 |
|
GSE222811 |
| Cheng, Chia-Ho et al. (2013) Keratin gene expression profiles after digit amputation in C57BL/6 vs. regenerative MRL mice imply an early regenerative keratinocyte activated-like state.; Physiol Genomics, 45: 409-21 |
|
GSE26227 |
| Cheng, Christine S et al. (2017) Iterative Modeling Reveals Evidence of Sequential Transcriptional Control Mechanisms.; Cell Syst, 4: 330-343.e5 |
|
GSE68318 |
| Cheng, Ee-Chun et al. (2014) PIWI proteins are dispensable for mouse somatic development and reprogramming of fibroblasts into pluripotent stem cells.; PLoS One, 9: e97821 |
|
GSE54619 |
| Cheng, Fubo et al. (2022) DYT6 mutated THAP1 is a cell type dependent regulator of the SP1 family.; Brain, [no vol.]: [no pages] |
|
GSE184958 GSE147633 GSE184959 |
| Cheng, Georgiana et al. (2004) Conserved and muscle-group-specific gene expression patterns shape postnatal development of the novel extraocular muscle phenotype.; Physiol Genomics, 18: 184-95 |
|
GSE903 |
| Cheng, Hao et al. (2018) Repression of human and mouse brain inflammaging transcriptome by broad gene-body histone hyperacetylation.; Proc Natl Acad Sci U S A, 115: 7611-7616 |
|
GSE106669.2 GSE106669.1 |
| Cheng, Hong et al. (2006) In vivo function of the orphan nuclear receptor NR2E3 in establishing photoreceptor identity during mammalian retinal development.; Hum Mol Genet, 15: 2588-602 |
|
GSE5338 |
| Cheng, Hong Sheng et al. (2024) Dual p38MAPK and MEK inhibition disrupts adaptive chemoresistance in mesenchymal glioblastoma to temozolomide.; Neuro Oncol, 26: 1247-1261 |
|
GSE211462 |
| Cheng, Jia et al. (2019) HCN2 Channels in Cholinergic Interneurons of Nucleus Accumbens Shell Regulate Depressive Behaviors.; Neuron, 101: 662-672.e5 |
|
GSE106389 |
| Cheng, Jinbo et al. (2021) Microglial Calhm2 regulates neuroinflammation and contributes to Alzheimer's disease pathology.; Sci Adv, 7: [no pages] |
|
GSE164415 |
| Cheng, Junjie et al. (2024) Polo-like kinase 2 promotes microglial activation via regulation of the HSP90α/IKKβ pathway.; Cell Rep, 43: 114827 |
|
GSE272635 |
| Cheng, Kwai Wa et al. (2012) Rab25 increases cellular ATP and glycogen stores protecting cancer cells from bioenergetic stress.; EMBO Mol Med, 4: 125-41 |
|
GSE28299 |
| Cheng, Liang et al. (2019) Chromatin Assembly Factor 1 (CAF-1) facilitates the establishment of facultative heterochromatin during pluripotency exit.; Nucleic Acids Res, 47: 11114-11131 |
|
GSE130706 |
| Cheng, Lin et al. (2018) Ezh2 does not mediate retinal ganglion cell homeostasis or their susceptibility to injury.; PLoS One, 13: e0191853 |
|
GSE93674 |
| Cheng, Ningyan et al. (2022) STAG2 promotes the myelination transcriptional program in oligodendrocytes.; Elife, 11: [no pages] |
|
GSE186890 |
| Cheng, Pei-Hsun et al. (2013) miR-196a ameliorates phenotypes of Huntington disease in cell, transgenic mouse, and induced pluripotent stem cell models.; Am J Hum Genet, 93: 306-12 |
|
GSE47500 |
| Cheng, Phil F et al. (2015) Methylation-dependent SOX9 expression mediates invasion in human melanoma cells and is a negative prognostic factor in advanced melanoma.; Genome Biol, 16: 42 |
|
GSE57463 |
| Cheng, Qingwen et al. [Unknown date]TREM2-activating antibodies abrogate the negative pleiotropic effects of the Alzheimer's disease variantTrem2R47Hon murine myeloid cell function.; J Biol Chem, 293: 12620-12633 |
|
GSE124097 |
| Cheng, Shimei et al. (2024) Synergistic effects of repeated transcranial magnetic stimulation and mesenchymal stem cells transplantation on alleviating neuroinflammation and PANoptosis in cerebral ischemia.; J Neuroinflammation, 21: 311 |
|
GSE282396 |
| Cheng, Wei et al. (2023) Intrathecal delivery of AAV-NDNF ameliorates disease progression of ALS mice.; Mol Ther, [no vol.]: [no pages] |
|
GSE226291 |
| Cheng, Wenwen et al. (2021) NTS Prlh overcomes orexigenic stimuli and ameliorates dietary and genetic forms of obesity.; Nat Commun, 12: 5175 |
|
GSE176202 |
| Cheng, Yali et al. (2018) Estrogen and high-fat diet induced alterations in C57BL/6 mice endometrial transcriptome profile.; Endocr Connect, 7: 36-46 |
|
GSE102103 |
| Cheng, Yi-Ting et al. (2023) Inhibitory input directs astrocyte morphogenesis through glial GABABR.; Nature, 617: 369-376 |
|
GSE198632 |
| Cheng, Ying et al. (2016) LNK/SH2B3 regulates IL-7 receptor signaling in normal and malignant B-progenitors.; J Clin Invest, 126: 1267-81 |
|
GSE76940 |