List of all 22,542 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Cerase, Andrea et al. (2021) Chd8 regulates X chromosome inactivation in mouse through fine-tuning control of Xist expression.; Commun Biol, 4: 485 |
|
GSE166858 |
| Cerda-Jara, Cledi A et al. (2024) miR-7 controls glutamatergic transmission and neuronal connectivity in a Cdr1as-dependent manner.; EMBO Rep, 25: 3008-3039 |
|
GSE224184 |
| Ceresa, Davide et al. (2023) Early clonal extinction in glioblastoma progression revealed by genetic barcoding.; Cancer Cell, 41: 1466-1479.e9 |
|
GSE189517 |
| Ceribelli, Michele et al. (2016) A Druggable TCF4- and BRD4-Dependent Transcriptional Network Sustains Malignancy in Blastic Plasmacytoid Dendritic Cell Neoplasm.; Cancer Cell, 30: 764-778 |
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GSE75650.1 GSE75650.2 |
| Cermenati, Gaia et al. (2015) Lack of sterol regulatory element binding factor-1c imposes glial Fatty Acid utilization leading to peripheral neuropathy.; Cell Metab, 21: 571-83 |
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GSE65754 |
| Cernetich, Amy et al. (2006) Involvement of gonadal steroids and gamma interferon in sex differences in response to blood-stage malaria infection.; Infect Immun, 74: 3190-203 |
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GSE4324 |
| Cerniauskas, Ignas et al. (2019) Chronic Stress Induces Activity, Synaptic, and Transcriptional Remodeling of the Lateral Habenula Associated with Deficits in Motivated Behaviors.; Neuron, 104: 899-915.e8 |
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GSE136723 |
| Cerri, Chiara et al. (2016) The Chemokine CCL2 Mediates the Seizure-enhancing Effects of Systemic Inflammation.; J Neurosci, 36: 3777-88 |
|
GSE81024 |
| Cervantes, Sara et al. (2017) Late-stage differentiation of embryonic pancreatic β-cells requires Jarid2.; Sci Rep, 7: 11643 |
|
GSE77238 |
| Cesani, Martina et al. (2013) Metallothioneins as dynamic markers for brain disease in lysosomal disorders.; Ann Neurol, [no vol.]: [no pages] |
|
GSE23350 |
| Cescon, Matilde et al. (2023) Collagen VI sustains cell stemness and chemotherapy resistance in glioblastoma.; Cell Mol Life Sci, 80: 233 |
|
GSE226700 |
| Cescon, Matilde et al. (2024) Gut microbiota depletion delays somatic peripheral nerve development and impairs neuromuscular junction maturation.; Gut Microbes, 16: 2363015 |
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GSE210649.1 |
| Ceyzériat, Kelly et al. (2018) Modulation of astrocyte reactivity improves functional deficits in mouse models of Alzheimer's disease.; Acta Neuropathol Commun, 6: 104 |
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GSE108520 |
| Cha, Hye Ji et al. (2022) Regulation of gene expression by the APP family in the adult cerebral cortex.; Sci Rep, 12: 66 |
|
GSE181936 |
| Cha, Jeeyeon et al. (2023) Species-specific roles for the MAFA and MAFB transcription factors in regulating islet β cell identity.; JCI Insight, 8: [no pages] |
|
GSE228992.1 GSE224797 GSE230728 |
| Cha, Junha et al. (2024) Single-cell analysis reveals cellular and molecular factors counteracting HPV-positive oropharyngeal cancer immunotherapy outcomes.; J Immunother Cancer, 12: [no pages] |
|
GSE226620.1 |
| Chaand, Mudit et al. (2023) Erythroid lineage chromatin accessibility maps facilitate identification and validation of NFIX as a fetal hemoglobin repressor.; Commun Biol, 6: 640 |
|
GSE234155 |
| Chabbert, Dorian et al. (2019) Postnatal Tshz3 Deletion Drives Altered Corticostriatal Function and Autism Spectrum Disorder-like Behavior.; Biol Psychiatry, 86: 274-285 |
|
GSE119791 |
| Chaboub, Lesley S et al. (2016) Temporal Profiling of Astrocyte Precursors Reveals Parallel Roles for Asef during Development and after Injury.; J Neurosci, 36: 11904-11917 |
|
GSE80826 |
| Chabowska-Kita, Agnieszka et al. (2015) Low ambient temperature during early postnatal development fails to cause a permanent induction of brown adipocytes.; FASEB J, 29: 3238-52 |
|
GSE62350 |
| Chacón, Pedro J et al. (2015) Cerebellin 4, a synaptic protein, enhances inhibitory activity and resistance of neurons to amyloid-? toxicity.; Neurobiol Aging, 36: 1057-71 |
|
GSE54622 |
| Chadarevian, Jean Paul et al. (2023) Engineering an inhibitor-resistant human CSF1R variant for microglia replacement.; J Exp Med, 220: [no pages] |
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GSE220213 GSE220214 |
| Chadarevian, Jean Paul et al. (2026) CSF1R inhibitor-resistant model for CNS-wide microglia replacement strategies.; Mol Ther, 34: 832-849 |
|
GSE311140 |
| Chadwick, Jessica A et al. (2017) Renin-angiotensin-aldosterone system inhibitors improve membrane stability and change gene-expression profiles in dystrophic skeletal muscles.; Am J Physiol Cell Physiol, 312: C155-C168 |
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GSE84876 |
| Chadwick, Jessica S et al. (2025) Dietary-dependent sensitization of neuronal leptin signaling promotes neural repair after injury via cAMP and gene transcription.; Neuron, 113: 2839-2855.e8 |
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GSE224284 GSE224220 |
| Chadwick, Wayne et al. (2010) Minimal peroxide exposure of neuronal cells induces multifaceted adaptive responses.; PLoS One, 5: e14352 |
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GSE22525 |
| Chadwick, Wayne et al. (2011) Amitriptyline-mediated cognitive enhancement in aged 3×Tg Alzheimer's disease mice is associated with neurogenesis and neurotrophic activity.; PLoS One, 6: e21660 |
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GSE26836 |
| Chadwick, Wayne et al. (2011) Multiple oxygen tension environments reveal diverse patterns of transcriptional regulation in primary astrocytes.; PLoS One, 6: e21638 |
|
GSE29296 |
| Chae, Sujin et al. (2021) Molecular laterality encodes stress susceptibility in the medial prefrontal cortex.; Mol Brain, 14: 92 |
|
GSE114224 |
| Chahal, Manik et al. (2010) MGMT modulates glioblastoma angiogenesis and response to the tyrosine kinase inhibitor sunitinib.; Neuro Oncol, 12: 822-33 |
|
GSE40776 |
| Chahrour, Maria et al. (2008) MeCP2, a key contributor to neurological disease, activates and represses transcription.; Science, 320: 1224-9 |
|
GSE11150 |
| Chai, MuhChyi et al. (2018) Chromatin remodeler CHD7 regulates the stem cell identity of human neural progenitors.; Genes Dev, 32: 165-180 |
|
GSE108170 GSE89951 |
| Chai, Noori et al. (2020) Genome-wide synthetic lethal CRISPR screen identifies FIS1 as a genetic interactor of ALS-linked C9ORF72.; Brain Res, 1728: 146601 |
|
GSE142504 |
| Chai, Yoke Chin et al. (2024) Spatially Self-Organized Three-Dimensional Neural Concentroid as a Novel Reductionist Humanized Model to Study Neurovascular Development.; Adv Sci (Weinh), 11: e2304421 |
|
GSE192919 |
| Chai, Yue et al. (2026) Base editing restores CDKL5 expression and rescues neuronal deficits in a patient-derived model of CDKL5 deficiency disorder.; Sci Rep, 16: [no pages] |
|
GSE325168 |
| Chai, Zhi et al. (2021) RNAseq studies reveal distinct transcriptional response to vitamin A deficiency in small intestine versus colon, uncovering novel vitamin A-regulated genes.; J Nutr Biochem, 98: 108814 |
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GSE143290 |
| Chaignat, Evelyne et al. (2011) Copy number variation modifies expression time courses.; Genome Res, 21: 106-13 |
|
GSE16675 |
| Chaika, Nina V et al. (2012) Differential expression of metabolic genes in tumor and stromal components of primary and metastatic loci in pancreatic adenocarcinoma.; PLoS One, 7: e32996 |
|
GSE34153 |
| Chaillou, Thomas et al. (2013) Time course of gene expression during mouse skeletal muscle hypertrophy.; J Appl Physiol (1985), 115: 1065-74 |
|
GSE47098 |
| Chaim, Olga Meiri et al. (2023) Gα12 signaling regulates transcriptional and phenotypic responses that promote glioblastoma tumor invasion.; Sci Rep, 13: 22412 |
|
GSE229420 |
| Chaix, Amandine et al. (2019) Time-Restricted Feeding Prevents Obesity and Metabolic Syndrome in Mice Lacking a Circadian Clock.; Cell Metab, 29: 303-319.e4 |
|
GSE102072 |
| Chakhtoura, Marita et al. (2021) Germinal Center T follicular helper (GC-Tfh) cell impairment in chronic HIV infection involves c-Maf signaling.; PLoS Pathog, 17: e1009732 |
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GSE173500 GSE175728 |
| Chakraborty, Arup R et al. (2013) MAPK pathway activation leads to Bim loss and histone deacetylase inhibitor resistance: rationale to combine romidepsin with an MEK inhibitor.; Blood, 121: 4115-25 |
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GSE45405 |
| Chakraborty, Joydeep et al. (2026) Dietary folic acid prevents peripheral neuropathy in mouse models of neural tube defects and type 2 diabetes.; Proc Natl Acad Sci U S A, 123: e2528095123 |
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GSE275111 |
| Chakraborty, Nabarun et al. (2017) Contributions of polyunsaturated fatty acids (PUFA) on cerebral neurobiology: an integrated omics approach with epigenomic focus.; J Nutr Biochem, 42: 84-94 |
|
GSE83543 |
| Chakraborty, Nabarun et al. (2022) Comparison of Transcriptional Signatures of Three Staphylococcal Superantigenic Toxins in Human Melanocytes.; Biomedicines, 10: [no pages] |
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GSE124756 |
| Chakraborty, Shreeta et al. (2024) Structural perturbation of chromatin domains with multiple developmental regulators can severely impact gene regulation and development.; bioRxiv, [no vol.]: [no pages] |
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GSE274230 GSE274231 |
| Chakraborty, Subhamoy et al. (2023) De novo and histologically transformed small cell lung cancer is sensitive to lurbinectedin treatment through the modulation of EMT and NOTCH signaling pathways.; Clin Cancer Res, [no vol.]: [no pages] |
|
GSE223372 |
| Chal, Jérome et al. (2018) Recapitulating early development of mouse musculoskeletal precursors of the paraxial mesodermin vitro.; Development, 145: [no pages] |
|
GSE111392 |
| Chalei, Vladislava et al. (2014) The long non-coding RNA Dali is an epigenetic regulator of neural differentiation.; Elife, 3: e04530 |
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GSE62033 GSE62032 GSE62031 |
| Chali, Farah et al. (2019) Lipid markers and related transcripts during excitotoxic neurodegeneration in kainate-treated mice.; Eur J Neurosci, 50: 1759-1778 |
|
GSE99577 |
| Chalkiadaki, Angeliki et al. (2012) High-fat diet triggers inflammation-induced cleavage of SIRT1 in adipose tissue to promote metabolic dysfunction.; Cell Metab, 16: 180-8 |
|
GSE30247 |
| Chalkley, Mary-Bronwen L et al. (2024) Human TSC2 Mutant Cells Exhibit Aberrations in Early Neurodevelopment Accompanied by Changes in the DNA Methylome.; bioRxiv, [no vol.]: [no pages] |
|
GSE264590 |
| Challen, Grant A et al. (2011) Dnmt3a is essential for hematopoietic stem cell differentiation.; Nat Genet, 44: 23-31 |
|
GSE27322 |
| Challen, Grant A et al. (2014) Dnmt3a and Dnmt3b have overlapping and distinct functions in hematopoietic stem cells.; Cell Stem Cell, 15: 350-64 |
|
GSE50775 |
| Chalmel, Frédéric et al. (2014) High-resolution profiling of novel transcribed regions during rat spermatogenesis.; Biol Reprod, 91: 5 |
|
GSE48321 |
| Chamankhah, Mahmood et al. (2013) Genome-wide gene expression profiling of stress response in a spinal cord clip compression injury model.; BMC Genomics, 14: 583 |
|
GSE45006 |
| Chambers, Stuart M et al. (2007) Aging hematopoietic stem cells decline in function and exhibit epigenetic dysregulation.; PLoS Biol, 5: e201 |
|
GSE6503 |
| Chambers, Stuart M et al. (2007) Hematopoietic fingerprints: an expression database of stem cells and their progeny.; Cell Stem Cell, 1: 578-91 |
|
GSE6506 |
| Chambers, Stuart M et al. (2012) Combined small-molecule inhibition accelerates developmental timing and converts human pluripotent stem cells into nociceptors.; Nat Biotechnol, 30: 715-20 |
|
GSE26867 |
| Chan, Carol W M et al. (2009) Gastrointestinal differentiation marker Cytokeratin 20 is regulated by homeobox gene CDX1.; Proc Natl Acad Sci U S A, 106: 1936-41 |
|
GSE14380 |
| Chan, Christopher T et al. (2009) Nocturnal hemodialysis improves erythropoietin responsiveness and growth of hematopoietic stem cells.; J Am Soc Nephrol, 20: 665-71 |
|
GSE11227 |
| Chan, Ivan H et al. (2009) Isoform-specific transcriptional activity of overlapping target genes that respond to thyroid hormone receptors alpha1 and beta1.; Mol Endocrinol, 23: 1758-75 |
|
GSE17561 |
| Chan, Jennifer C et al. (2020) Reproductive tract extracellular vesicles are sufficient to transmit intergenerational stress and program neurodevelopment.; Nat Commun, 11: 1499 |
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GSE145051.1.2 GSE145051.2 GSE145051.1.3 GSE145051.1.1 |
| Chan, Jennifer C et al. (2024) Serotonin Transporter-dependent Histone Serotonylation in Placenta Contributes to the Neurodevelopmental Transcriptome.; J Mol Biol, 436: 168454 |
|
GSE246539 |
| Chan, Maren M et al. (2005) Gene expression profiling of NMU-induced rat mammary tumors: cross species comparison with human breast cancer.; Carcinogenesis, 26: 1343-53 |
|
GSE1872 |
| Chan, Maren M et al. (2007) Serial transplantation of NMU-induced rat mammary tumors: a model of human breast cancer progression.; Int J Cancer, 121: 474-85 |
|
GSE6093 |
| Chan, Siu Chiu et al. (2015) Targeting chromatin binding regulation of constitutively active AR variants to overcome prostate cancer resistance to endocrine-based therapies.; Nucleic Acids Res, 43: 5880-97 |
|
GSE49169 |
| Chan, Wai-In et al. (2011) The transcriptional coactivator Cbp regulates self-renewal and differentiation in adult hematopoietic stem cells.; Mol Cell Biol, 31: 5046-60 |
|
GSE25268 |
| Chan, Wing Keung et al. (2013) Multiplex and genome-wide analyses reveal distinctive properties of KIR+ and CD56+ T cells in human blood.; J Immunol, 191: 1625-36 |
|
GSE47855 |
| Chan, Yi-Wah et al. (2014) Assessment of myometrial transcriptome changes associated with spontaneous human labour by high-throughput RNA-seq.; Exp Physiol, 99: 510-24 |
|
GSE50599 |
| Chanda, Soham et al. (2019) Direct Reprogramming of Human Neurons Identifies MARCKSL1 as a Pathogenic Mediator of Valproic Acid-Induced Teratogenicity.; Cell Stem Cell, 25: 103-119.e6 |
|
GSE129241 |
| Chandra, Sidhanth et al. (2025) The gut microbiome controls reactive astrocytosis during Aβ amyloidosis via propionate-mediated regulation of IL-17.; J Clin Invest, 135: [no pages] |
|
GSE295459 GSE295458 |
| Chandran, Uma R et al. (2007) Gene expression profiles of prostate cancer reveal involvement of multiple molecular pathways in the metastatic process.; BMC Cancer, 7: 64 |
|
GSE6752 |
| Chandran, Vijayendran et al. (2016) A Systems-Level Analysis of the Peripheral Nerve Intrinsic Axonal Growth Program.; Neuron, 89: 956-70 |
|
GSE76679 |
| Chandran, Vijayendran et al. (2017) Inducible and reversible phenotypes in a novel mouse model of Friedreich's Ataxia.; Elife, 6: [no pages] |
|
GSE98790 |
| Chandrasekaran, Abinaya et al. (2021) Astrocytic reactivity triggered by defective autophagy and metabolic failure causes neurotoxicity in frontotemporal dementia type 3.; Stem Cell Reports, 16: 2736-2751 |
|
GSE141388 |
| Chandrasekharan, Kumaran et al. (2010) A human-specific deletion in mouse Cmah increases disease severity in the mdx model of Duchenne muscular dystrophy.; Sci Transl Med, 2: 42ra54 |
|
GSE16438 |
| Chandrashekar, Ranjitha et al. (2025) Stress During Lactation: A Hidden Link to Offspring Bone Health.; Calcif Tissue Int, 116: 79 |
|
GSE297538 |
| Chandriani, Sanjay et al. (2009) A core MYC gene expression signature is prominent in basal-like breast cancer but only partially overlaps the core serum response.; PLoS One, 4: e6693 |
|
GSE15523.1 |
| Chandriani, Sanjay et al. (2014) Endogenously expressed IL-13R?2 attenuates IL-13-mediated responses but does not activate signaling in human lung fibroblasts.; J Immunol, 193: 111-9 |
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GSE47538 GSE47527 GSE47542 |
| Chang Milbauer, Liming et al. (2008) Genetic endothelial systems biology of sickle stroke risk.; Blood, 111: 3872-9 |
|
GSE9877 |
| Chang, Allen H K et al. (2011) Iron regulatory protein 2 turnover through a nonproteasomal pathway.; J Biol Chem, 286: 23698-707 |
|
GSE14429 |
| Chang, Anne Lynn S et al. (2013) Rejuvenation of gene expression pattern of aged human skin by broadband light treatment: a pilot study.; J Invest Dermatol, 133: 394-402 |
|
GSE39170 |