List of all 20,073 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Chen, Haobin et al. (2023) BET Inhibitors Target the SCLC-N Subtype of Small-Cell Lung Cancer by Blocking NEUROD1 Transactivation.; Mol Cancer Res, 21: 91-101 |
|
GSE210101 |
| Chen, Holly Y et al. (2023) Reserpine maintains photoreceptor survival in retinal ciliopathy by resolving proteostasis imbalance and ciliogenesis defects.; Elife, 12: [no pages] |
|
GSE206959 |
| Chen, Hongjin et al. (2023) Multi-omics analysis revealed the role of CYP1A2 in the induction of mechanical allodynia in type 1 diabetes.; Front Genet, 14: 1151340 |
|
GSE226315 |
| Chen, Hongwei et al. (2015) Reinforcement of STAT3 activity reprogrammes human embryonic stem cells to naive-like pluripotency.; Nat Commun, 6: 7095 |
|
GSE55708 |
| Chen, Hsiao-Chi et al. (2024) Histone serotonylation regulates ependymoma tumorigenesis.; Nature, 632: 903-910 |
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GSE246031 |
| Chen, Hsin-Fu et al. (2015) Characteristic expression of major histocompatibility complex and immune privilege genes in human pluripotent stem cells and their derivatives.; Cell Transplant, 24: 845-64 |
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GSE28406 |
| Chen, Hui-Wen et al. (2024) Imbalance inUnc80RNA Editing Disrupts Dynamic Neuronal Activity and Olfactory Perception.; Int J Mol Sci, 25: [no pages] |
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GSE269152 |
| Chen, Huiyi et al. (2008) The aged retinal pigment epithelium/choroid: a potential substratum for the pathogenesis of age-related macular degeneration.; PLoS One, 3: e2339 |
|
GSE10965 |
| Chen, Jasmine et al. (2021) Lineage-restricted neoplasia driven by Myc defaults to small cell lung cancer when combined with loss of p53 and Rb in the airway epithelium.; Oncogene, [no vol.]: [no pages] |
|
GSE161185 |
| Chen, Jefferson K et al. (2023) IRX5 promotes DNA damage repair and activation of hair follicle stem cells.; Stem Cell Reports, [no vol.]: [no pages] |
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GSE202086 GSE202075 |
| Chen, Jennifer Y et al. (2017) Tricyclic Antidepressants Promote Ceramide Accumulation to Regulate Collagen Production in Human Hepatic Stellate Cells.; Sci Rep, 7: 44867 |
|
GSE78853 |
| Chen, Jessie et al. (2018) BMP-Responsive Protease HtrA1 Is Differentially Expressed in Astrocytes and Regulates Astrocytic Development and Injury Response.; J Neurosci, 38: 3840-3857 |
|
GSE67942 |
| Chen, Jessy et al. (2021) CaM Kinase II-δ Is Required for Diabetic Hyperglycemia and Retinopathy but Not Nephropathy.; Diabetes, 70: 616-626 |
|
GSE157739 |
| Chen, Jian et al. (2013) Transcriptome comparison of human neurons generated using induced pluripotent stem cells derived from dental pulp and skin fibroblasts.; PLoS One, 8: e75682 |
|
GSE43143 |
| Chen, Jian et al. (2015) ZNF804A Transcriptional Networks in Differentiating Neurons Derived from Induced Pluripotent Stem Cells of Human Origin.; PLoS One, 10: e0124597 |
|
GSE54112 |
| Chen, Jian et al. (2018) AXL promotes Zika virus infection in astrocytes by antagonizing type I interferon signalling.; Nat Microbiol, 3: 302-309 |
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GSE106545 |
| Chen, Jiayang et al. (2021) A MYT1L syndrome mouse model recapitulates patient phenotypes and reveals altered brain development due to disrupted neuronal maturation.; Neuron, 109: 3775-3792.e14 |
|
GSE173926 |
| Chen, Jichao et al. (2007) Estrogen-related receptor beta/NR3B2 controls epithelial cell fate and endolymph production by the stria vascularis.; Dev Cell, 13: 325-37 |
|
GSE8434 |
| Chen, Jie et al. (2019) Acupuncture Treatment Reverses Retinal Gene Expression Induced by Optic Nerve Injury via RNA Sequencing Analysis.; Front Integr Neurosci, 13: 59 |
|
GSE131486 |
| Chen, Jie et al. (2020) Effects of Retinal Transcription Regulation After GB20 Needling Treatment in Retina With Optic Neuritis.; Front Integr Neurosci, 14: 568449 |
|
GSE148759 |
| Chen, Jie et al. (2025) Non-canonical hepatic androgen receptor mediates glucagon sensitivity in female mice through the PGC1α/ERRα/mitochondria axis.; Cell Rep, 44: 115188 |
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GSE236551 |
| Chen, Jing et al. (2012) Retinal expression of Wnt-pathway mediated genes in low-density lipoprotein receptor-related protein 5 (Lrp5) knockout mice.; PLoS One, 7: e30203 |
|
GSE32145 |
| Chen, Jing et al. (2017) Cytokine receptor signaling is required for the survival of ALK- anaplastic large cell lymphoma, even in the presence of JAK1/STAT3 mutations.; Proc Natl Acad Sci U S A, 114: 3975-3980 |
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GSE96048 |
| Chen, Jiwang et al. (2013) Linezolid Exerts Greater Bacterial Clearance but No Modification of Host Lung Gene Expression Profiling: A Mouse MRSA Pneumonia Model.; PLoS One, 8: e67994 |
|
GSE46071 |
| Chen, Julia Ling-Yu et al. (2008) The genomic analysis of lactic acidosis and acidosis response in human cancers.; PLoS Genet, 4: e1000293 |
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GSE9649 |
| Chen, Jun et al. (2016) Hierarchical Oct4 Binding in Concert with Primed Epigenetic Rearrangements during Somatic Cell Reprogramming.; Cell Rep, 14: 1540-1554 |
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GSE67462 |
| Chen, Justin et al. (2015) The genetics of splicing in neuroblastoma.; Cancer Discov, 5: 380-95 |
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GSE55248 |
| Chen, Kai et al. (2025) Enhancing TREM2 expression activates microglia and modestly mitigates tau pathology and neurodegeneration.; J Neuroinflammation, 22: 93 |
|
GSE285713 |
| Chen, Ke Yun et al. (2021) Adipocyte-Specific Ablation of PU.1 Promotes Energy Expenditure and Ameliorates Metabolic Syndrome in Aging Mice.; Front Aging, 2: 803482 |
|
GSE188497 |
| Chen, Kelan et al. (2015) Genome-wide binding and mechanistic analyses of Smchd1-mediated epigenetic regulation.; Proc Natl Acad Sci U S A, 112: E3535-44 |
|
GSE65747 |
| Chen, Kenian et al. (2013) RNA-seq characterization of spinal cord injury transcriptome in acute/subacute phases: a resource for understanding the pathology at the systems level.; PLoS One, 8: e72567 |
|
GSE45376 |
| Chen, Kuey-Chu et al. (2013) Glucocorticoid-dependent hippocampal transcriptome in male rats: pathway-specific alterations with aging.; Endocrinology, 154: 2807-20 |
|
GSE37618 |
| Chen, Lehua et al. (2025) The DNA demethylase TET1 modifies the impact of maternal folic acid status on embryonic brain development.; EMBO Rep, 26: 175-199 |
|
GSE275393 |
| Chen, Lei et al. (2023) High-throughput drug screening identifies fluoxetine as a potential therapeutic agent for neuroendocrine prostate cancer.; Front Oncol, 13: 1085569 |
|
GSE224715 |
| Chen, Lei et al. (2023) RBM4 dictates ESCC cell fate switch from cellular senescence to glutamine-addiction survival through inhibiting LKB1-AMPK-axis.; Signal Transduct Target Ther, 8: 159 |
|
GSE220613 |
| Chen, Li et al. (2010) Genome-wide analysis of YY2 versus YY1 target genes.; Nucleic Acids Res, 38: 4011-26 |
|
GSE14964 |
| Chen, Liang-Fu et al. (2020) The NMDA receptor subunit GluN3A regulates synaptic activity-induced and myocyte enhancer factor 2C (MEF2C)-dependent transcription.; J Biol Chem, 295: 8613-8627 |
|
GSE133917 |
| Chen, Lin et al. (2010) Positional differences in the wound transcriptome of skin and oral mucosa.; BMC Genomics, 11: 471 |
|
GSE23006 |
| Chen, Lin et al. (2015) MeCP2 binds to non-CG methylated DNA as neurons mature, influencing transcription and the timing of onset for Rett syndrome.; Proc Natl Acad Sci U S A, 112: 5509-14 |
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GSE66870 |
| Chen, Linfeng et al. (2013) SYK inhibition modulates distinct PI3K/AKT- dependent survival pathways and cholesterol biosynthesis in diffuse large B cell lymphomas.; Cancer Cell, 23: 826-38 |
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GSE34176 |
| Chen, Ling et al. (2021) Pten is a key intrinsic factor regulating raphe 5-HT neuronal plasticity and depressive behaviors in mice.; Transl Psychiatry, 11: 186 |
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GSE164610 |
| Chen, Liying et al. (2018) CRISPR-Cas9 screen reveals a MYCN-amplified neuroblastoma dependency on EZH2.; J Clin Invest, 128: 446-462 |
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GSE85431 |
| Chen, Lu et al. (2014) Human neural precursor cells promote neurologic recovery in a viral model of multiple sclerosis.; Stem Cell Reports, 2: 825-37 |
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GSE56187 |
| Chen, Lu et al. (2023) ANGPTL2 binds MAG to efficiently enhance oligodendrocyte differentiation.; Cell Biosci, 13: 42 |
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GSE199393 |
| Chen, Lunhao et al. (2022) mTOR-neuropeptide Y signaling sensitizes nociceptors to drive neuropathic pain.; JCI Insight, 7: [no pages] |
|
GSE184014 |
| Chen, Mei et al. (2025) Astragaloside IV ameliorates autism-like behaviors in BTBR mice by modulating Camk2n2-dependent OXPHOS and neurotransmission in the mPFC.; J Adv Res, 77: 763-777 |
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GSE271821 |
| Chen, Miaomiao et al. (2023) Endocannabinoid biosynthetic enzymes regulate pain response via LKB1-AMPK signaling.; Proc Natl Acad Sci U S A, 120: e2304900120 |
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GSE249312 |
| Chen, Minghui Jessica et al. (2011) A global transcriptomic view of the multifaceted role of glutathione peroxidase-1 in cerebral ischemic-reperfusion injury.; Free Radic Biol Med, 50: 736-48 |
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GSE23163 |
| Chen, Muwan et al. (2020) Rapid generation of regionally specified CNS neurons by sequential patterning and conversion of human induced pluripotent stem cells.; Stem Cell Res, 48: 101945 |
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GSE149864 |
| Chen, Nan et al. (2021) Maternal obesity interrupts the coordination of the unfolded protein response and heat shock response in the postnatal developing hypothalamus of male offspring in mice.; Mol Cell Endocrinol, 527: 111218 |
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GSE162744 |
| Chen, Patrick B et al. (2017) Mapping Gene Expression in Excitatory Neurons during Hippocampal Late-Phase Long-Term Potentiation.; Front Mol Neurosci, 10: 39 |
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GSE79790 |
| Chen, Peiwen et al. (2020) Circadian Regulator CLOCK Recruits Immune-Suppressive Microglia into the GBM Tumor Microenvironment.; Cancer Discov, 10: 371-381 |
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GSE140409 |
| Chen, Pengxiang et al. (2022) Olfactory sensory experience regulates gliomagenesis via neuronal IGF1.; Nature, 606: 550-556 |
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GSE189940 GSE159427 |
| Chen, Qian et al. (2022) LYL1 facilitates AETFC assembly and gene activation by recruiting CARM1 in t(8;21) AML.; Proc Natl Acad Sci U S A, 119: e2213718119 |
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GSE207233 |
| Chen, Qiqi et al. (2023) ZIKV infection differentially affects the transcriptional profiles in HTR8 and U251 cells.; Virus Res, 334: 199166 |
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GSE234128 |
| Chen, Quanhai et al. (2010) An association between gene expression and better survival in female mice following myocardial infarction.; J Mol Cell Cardiol, 49: 801-11 |
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GSE23294 |
| Chen, Renchao et al. (2022) Cell type-specific mechanism of Setd1a heterozygosity in schizophrenia pathogenesis.; Sci Adv, 8: eabm1077 |
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GSE181024 GSE181021.1 GSE181021.2 |
| Chen, Renrui et al. (2024) Circadian-driven tissue specificity is constrained under caloric restricted feeding conditions.; Commun Biol, 7: 752 |
|
GSE240689 |
| Chen, Rong et al. (2010) Differentially expressed RNA from public microarray data identifies serum protein biomarkers for cross-organ transplant rejection and other conditions.; PLoS Comput Biol, 6: [no pages] |
|
GSE14328 |
| Chen, Rui et al. (2023) CircTmeff1 Promotes Muscle Atrophy by Interacting with TDP-43 and Encoding A Novel TMEFF1-339aa Protein.; Adv Sci (Weinh), 10: e2206732 |
|
GSE205537 |
| Chen, Rui et al. (2024) Citrullination modulation stabilizes HIF-1α to promote tumour progression.; Nat Commun, 15: 7654 |
|
GSE233772 |
| Chen, Shaoxuan et al. (2021) Temporarily Epigenetic Repression in Bergmann Glia Regulates the Migration of Granule Cells.; Adv Sci (Weinh), 8: 2003164 |
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GSE155871 |
| Chen, Sheng-Wen et al. (2025) ECM29/proteasome-mediated self-antigen generation by CNS-resident neuroglia promotes regulatory T cell activation.; Cell Rep, 44: 115161 |
|
GSE251784 |
| Chen, Shuibing et al. (2021) SARS-CoV-2 Infection Causes Dopaminergic Neuron Senescence.; Res Sq, [no vol.]: [no pages] |
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GSE174745.2 GSE174745.1 |
| Chen, Shuyi et al. (2013) Defective FGF signaling causes coloboma formation and disrupts retinal neurogenesis.; Cell Res, 23: 254-73 |
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GSE41260 |
| Chen, Siqi et al. (2025) Inhibition of C3/C3aR Pathway Alleviates Visual and Optic Nerve Impairments in a Rat Model of Neuromyelitis Optica Spectrum Disorder.; Eur J Neurosci, 61: e70103 |
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GSE292730 |
| Chen, Siwei et al. (2020) Metabolomic and transcriptomic signatures of prenatal excessive methionine support nature rather than nurture in schizophrenia pathogenesis.; Commun Biol, 3: 409 |
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GSE153195 |
| Chen, Tian et al. (2015) ADAR1 is required for differentiation and neural induction by regulating microRNA processing in a catalytically independent manner.; Cell Res, 25: 459-76 |
|
GSE56152.2 |
| Chen, Ting et al. (2016) Liver kinase B1 inhibits the expression of inflammation-related genes postcontraction in skeletal muscle.; J Appl Physiol (1985), 120: 876-88 |
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GSE72352 |
| Chen, Tong et al. (2015) m(6)A RNA methylation is regulated by microRNAs and promotes reprogramming to pluripotency.; Cell Stem Cell, 16: 289-301 |
|
GSE52125 |
| Chen, Tzu-Yu et al. (2024) Mature neurons from iPSCs unveil neurodegeneration-related pathways in mucopolysaccharidosis type II: GSK-3β inhibition for therapeutic potential.; Cell Death Dis, 15: 302 |
|
GSE202344 |
| Chen, Vincent C et al. (2008) Notch signaling respecifies the hemangioblast to a cardiac fate.; Nat Biotechnol, 26: 1169-78 |
|
GSE12425 |
| Chen, Wei-Yang et al. (2021) Transcriptomics identifies STAT3 as a key regulator of hippocampal gene expression and anhedonia during withdrawal from chronic alcohol exposure.; Transl Psychiatry, 11: 298 |
|
GSE171051 |
| Chen, Wei-Yi et al. (2013) A TAF4 coactivator function for E proteins that involves enhanced TFIID binding.; Genes Dev, 27: 1596-609 |
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GSE46807 |
| Chen, Weili et al. (2008) Malignant transformation initiated by Mll-AF9: gene dosage and critical target cells.; Cancer Cell, 13: 432-40 |
|
GSE10627 |
| Chen, Weirong et al. (2023) SLE Antibody-Secreting Cells Are Characterized by Enhanced Peripheral Maturation and Survival Programs.; Res Sq, [no vol.]: [no pages] |
|
GSE235658 |
| Chen, Weiwei et al. (2022) The PLAUR signaling promotes chronic pruritus.; FASEB J, 36: e22368 |
|
GSE189333 |
| Chen, Weiyi et al. (2023) Nutrient-sensing AgRP neurons relay control of liver autophagy during energy deprivation.; Cell Metab, 35: 786-806.e13 |
|
GSE188472 |
| Chen, Wen et al. (2021) Fetal growth restriction impairs hippocampal neurogenesis and cognition via Tet1 in offspring.; Cell Rep, 37: 109912 |
|
GSE143816 |
| Chen, Xi et al. (2014) XBP1 promotes triple-negative breast cancer by controlling the HIF1? pathway.; Nature, 508: 103-7 |
|
GSE49953 |
| Chen, Xi et al. (2021) Distinct Persistence Fate of Mycobacterium tuberculosis in Various Types of Cells.; mSystems, 6: e0078321 |
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GSE125907.1 GSE125907.2 |
| Chen, Xi et al. (2023) circGLS2 inhibits hepatocellular carcinoma recurrence via regulating hsa-miR-222-3p-PTEN-AKT signaling.; Signal Transduct Target Ther, 8: 67 |
|
GSE182593 |
| Chen, Xia et al. (2022) Catalytic Subunit of Protein Phosphatase 2A (PP2Ac) Influences the Meiosis Initiation During Spermatocyte Meiosis Prophase I.; Reprod Sci, 29: 3201-3211 |
|
GSE181132 |
| Chen, Xiameng et al. (2020) Comparative Transcriptomic Analyses of Developing Melanocortin Neurons Reveal New Regulators for the Anorexigenic Neuron Identity.; J Neurosci, 40: 3165-3177 |
|
GSE146816 |
| Chen, Xiang et al. (2021) RHAMMB-mediated bifunctional nanotherapy targeting Bcl-xL and mitochondria for pancreatic neuroendocrine tumor treatment.; Mol Ther Oncolytics, 23: 277-287 |
|
GSE200497 |
| Chen, Xiang et al. (2025) Manipulating Zika virus RNA tertiary structure for developing tissue-specific attenuated vaccines.; EMBO Mol Med, 17: 2787-2808 |
|
GSE301761 |
| Chen, Xiangjun et al. (2022) pH sensing controls tissue inflammation by modulating cellular metabolism and endo-lysosomal function of immune cells.; Nat Immunol, 23: 1063-1075 |
|
GSE182767 |
| Chen, Xiao-Yu et al. (2021) The m6A Reader YTHDF1 Facilitates the Tumorigenesis and Metastasis of Gastric Cancer via USP14 Translation in an m6A-Dependent Manner.; Front Cell Dev Biol, 9: 647702 |
|
GSE166972 |
| Chen, Xiaoying et al. (2019) The Transcriptional Regulator SnoN Promotes the Proliferation of Cerebellar Granule Neuron Precursors in the Postnatal Mouse Brain.; J Neurosci, 39: 44-62 |
|
GSE120279 |
| Chen, Xin et al. (2004) Novel endothelial cell markers in hepatocellular carcinoma.; Mod Pathol, 17: 1198-210 |
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GSE3500 |
| Chen, Xingyong et al. (2022) White matter damage as a consequence of vascular dysfunction in a spontaneous mouse model of chronic mild chronic hypoperfusion with eNOS deficiency.; Mol Psychiatry, 27: 4754-4769 |
|
GSE207961 |
| Chen, Xinjian et al. (2013) Pathways analysis of differential gene expression induced by engrafting doses of total body irradiation for allogeneic bone marrow transplantation in mice.; Immunogenetics, 65: 597-607 |
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GSE43310 |
| Chen, Xinpu et al. (2012) COUP-TFII is a major regulator of cell cycle and Notch signaling pathways.; Mol Endocrinol, 26: 1268-77 |
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GSE33301 |
| Chen, Xue et al. (2024) CARM1 hypermethylates the NuRD chromatin remodeling complex to promote cell cycle gene expression and breast cancer development.; Nucleic Acids Res, 52: 6811-6829 |
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GSE209909 |