List of all 16,752 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Cheng, Ying et al. (2018) Ten-Eleven Translocation Proteins Modulate the Response to Environmental Stress in Mice.; Cell Rep, 25: 3194-3203.e4 |
|
GSE106220 |
| Cheng, Ying et al. (2023) Decoding m6A RNA methylome identifies PRMT6-regulated lipid transport promoting AML stem cell maintenance.; Cell Stem Cell, 30: 69-85.e7 |
|
GSE210279 GSE210278 |
| Cheng, Ying et al. [Unknown date]Partial loss of psychiatric risk gene Mir137 in mice causes repetitive behavior and impairs sociability and learning via increased Pde10a.; Nat Neurosci, 21: 1689-1703 |
|
GSE79661 |
| Cheng, Yu-Che et al. (2022) Downregulated Calcium-Binding Protein S100A16 and HSP27 in Placenta-Derived Multipotent Cells Induce Functional Astrocyte Differentiation.; Stem Cell Rev Rep, 18: 839-852 |
|
GSE139656 |
| Cheng, Yung-Chih et al. (2021) Topoisomerase I inhibition and peripheral nerve injury induce DNA breaks and ATF3-associated axon regeneration in sensory neurons.; Cell Rep, 36: 109666 |
|
GSE113672 |
| Cheng, Yuyan et al. (2022) Transcription factor network analysis identifies REST/NRSF as an intrinsic regulator of CNS regeneration in mice.; Nat Commun, 13: 4418 |
|
GSE141583 |
| Chennakesavalu, Mohansrinivas et al. (2024) 5-Hydroxymethylcytosine Profiling of Cell-Free DNA Identifies Bivalent Genes That Are Prognostic of Survival in High-Risk Neuroblastoma.; JCO Precis Oncol, 8: e2300297 |
|
GSE212877 |
| Cheok, Meyling H et al. (2003) Treatment-specific changes in gene expression discriminate in vivo drug response in human leukemia cells.; Nat Genet, 34: 85-90 |
|
GSE412 |
| Cheong, Jae-Ho et al. (2011) Dual inhibition of tumor energy pathway by 2-deoxyglucose and metformin is effective against a broad spectrum of preclinical cancer models.; Mol Cancer Ther, 10: 2350-62 |
|
GSE16816 |
| Chepelev, Nikolai L et al. (2016) Transcriptional Profiling of Dibenzo[def,p]chrysene-induced Spleen Atrophy Provides Mechanistic Insights into its Immunotoxicity in MutaMouse.; Toxicol Sci, 149: 251-68 |
|
GSE72334 |
| Chepelev, Nikolai L et al. [Unknown date]Transcriptional profiling of the mouse hippocampus supports an NMDAR-mediated neurotoxic mode of action for benzo[a]pyrene.; Environ Mol Mutagen, 57: 350-63 |
|
GSE75206 |
| Cherepanova, Olga A et al. (2016) Activation of the pluripotency factor OCT4 in smooth muscle cells is atheroprotective.; Nat Med, 22: 657-65 |
|
GSE75044 |
| Cherianidou, Anna et al. (2022) Classification of Developmental Toxicants in a Human iPSC Transcriptomics-Based Test.; Chem Res Toxicol, 35: 760-773 |
|
GSE187001 |
| Cherief, Masnsen et al. (2023) TrkA-mediated sensory innervation of injured mouse tendon supports tendon sheath progenitor cell expansion and tendon repair.; Sci Transl Med, 15: eade4619 |
|
GSE221035 |
| Chern, Tiffany et al. (2022) Mutations in Hcfc1 and Ronin result in an inborn error of cobalamin metabolism and ribosomopathy.; Nat Commun, 13: 134 |
|
GSE161763 |
| Chernov, Andrei V et al. (2015) The calcium-binding proteins S100A8 and S100A9 initiate the early inflammatory program in injured peripheral nerves.; J Biol Chem, 290: 11771-84 |
|
GSE62282 |
| Chernov, Andrei V et al. (2021) Sexual Dimorphism of Early Transcriptional Reprogramming in Dorsal Root Ganglia After Peripheral Nerve Injury.; Front Mol Neurosci, 14: 779024 |
|
GSE182318 |
| Chernov, Andrei V et al. (2022) Sexual dimorphism of early transcriptional reprogramming in degenerating peripheral nerves.; Front Mol Neurosci, 15: 1029278 |
|
GSE182751 |
| Chernov, Andrei V et al. (2022) Sexually dimorphic transcriptional programs of early-phase response in regenerating peripheral nerves.; Front Mol Neurosci, 15: 958568 |
|
GSE182713 GSE182709 |
| Cherry, Timothy J et al. (2009) Development and diversification of retinal amacrine interneurons at single cell resolution.; Proc Natl Acad Sci U S A, 106: 9495-500 |
|
GSE9812 GSE12601 |
| Chessler, Anne-Danielle C et al. (2009) Trypanosoma cruzi triggers an early type I IFN response in vivo at the site of intradermal infection.; J Immunol, 182: 2288-96 |
|
GSE13522 |
| Chetaille, Bruno et al. (2009) Molecular profiling of classical Hodgkin lymphoma tissues uncovers variations in the tumor microenvironment and correlations with EBV infection and outcome.; Blood, 113: 2765-3775 |
|
GSE13996 |
| Cheung, Alice M S et al. (2009) A comparative study of bone marrow and peripheral blood CD34+ myeloblasts in acute myeloid leukaemia.; Br J Haematol, 144: 484-91 |
|
GSE12326 |
| Cheung, Gordon Y C et al. (2008) Transcriptional responses of murine macrophages to the adenylate cyclase toxin of Bordetella pertussis.; Microb Pathog, 44: 61-70 |
|
GSE51075 |
| Cheung, Hoi-Hung et al. (2014) Telomerase protects werner syndrome lineage-specific stem cells from premature aging.; Stem Cell Reports, 2: 534-46 |
|
GSE48761 |
| Cheung, Stanley K K et al. (2023) Neuropathological signatures revealed by transcriptomic and proteomic analysis in Pten-deficient mouse models.; Sci Rep, 13: 6763 |
|
GSE190879 |
| Cheung, Vivian G et al. (2003) Natural variation in human gene expression assessed in lymphoblastoid cells.; Nat Genet, 33: 422-5 |
|
GSE137 |
| Cheung, Vivian G et al. (2006) Heterozygous carriers of Nijmegen Breakage Syndrome have a distinct gene expression phenotype.; Genome Res, 16: 973-9 |
|
GSE3894 |
| Cheung, Vivian G et al. (2010) Polymorphic cis- and trans-regulation of human gene expression.; PLoS Biol, 8: [no pages] |
|
GSE16778 |
| Chevreau, Robert et al. (2021) RNA Profiling of Mouse Ependymal Cells after Spinal Cord Injury Identifies the Oncostatin Pathway as a Potential Key Regulator of Spinal Cord Stem Cell Fate.; Cells, 10: [no pages] |
|
GSE149669.2 GSE149669.1 |
| Chhabra, Gagan et al. (2024) Role of PLK1/NUMB/NOTCH in epithelial-mesenchymal transition in human melanoma.; NPJ Precis Oncol, 8: 6 |
|
GSE237385 |
| Chhabra, Nirav Florian et al. (2020) PAX6 mutation alters circadian rhythm and ? cell function in mice without affecting glucose tolerance.; Commun Biol, 3: 628 |
|
GSE128504 |
| Chhatbar, Chintan et al. (2018) Type I Interferon Receptor Signaling of Neurons and Astrocytes Regulates Microglia Activation during Viral Encephalitis.; Cell Rep, 25: 118-129.e4 |
|
GSE110188 |
| Chhikara, Maneesha et al. (2009) Carbon monoxide blocks lipopolysaccharide-induced gene expression by interfering with proximal TLR4 to NF-kappaB signal transduction in human monocytes.; PLoS One, 4: e8139 |
|
GSE16193 |
| Chi, Ani et al. (2024) Stem Leydig cells support macrophage immunological homeostasis through mitochondrial transfer in mice.; Nat Commun, 15: 2120 |
|
GSE254881 |
| Chi, Jen-Tsan et al. (2006) Gene expression programs in response to hypoxia: cell type specificity and prognostic significance in human cancers.; PLoS Med, 3: e47 |
|
GSE4185 |
| Chi, Liankai et al. [Unknown date]Targeted Differentiation of Regional Ventral Neuroprogenitors and Related Neuronal Subtypes from Human Pluripotent Stem Cells.; Stem Cell Reports, 7: 941-954 |
|
GSE82052 |
| Chi, Ping et al. (2010) ETV1 is a lineage survival factor that cooperates with KIT in gastrointestinal stromal tumours.; Nature, 467: 849-53 |
|
GSE22433 GSE19396 |
| Chia, Na-Yu et al. (2010) A genome-wide RNAi screen reveals determinants of human embryonic stem cell identity.; Nature, 468: 316-20 |
|
GSE22795 |
| Chiablaem, Khajeelak et al. (2024) Identification of RNF213 as a Potential Suppressor of Local Invasion in Intrahepatic Cholangiocarcinoma.; Lab Invest, 104: 102074 |
|
GSE235891 |
| Chiang, Cheng-Kang et al. [Unknown date]Quantitative phosphoproteomics reveals involvement of multiple signaling pathways in early phagocytosis by the retinal pigmented epithelium.; J Biol Chem, 292: 19826-19839 |
|
GSE96626 |
| Chiang, Jason et al. (2022) The molecular characteristics of low-grade and high-grade areas in desmoplastic infantile astrocytoma/ganglioglioma.; Neuropathol Appl Neurobiol, 48: e12801 |
|
GSE193129 |
| Chiang, Ming-Feng et al. (2013) Inducible deletion of the Blimp-1 gene in adult epidermis causes granulocyte-dominated chronic skin inflammation in mice.; Proc Natl Acad Sci U S A, 110: 6476-81 |
|
GSE34586 |
| Chiang, Yan Ting et al. (2014) GATA2 as a potential metastasis-driving gene in prostate cancer.; Oncotarget, 5: 451-61 |
|
GSE49342 |
| Chiarella, Emanuela et al. (2021) ZNF521 Enhances MLL-AF9-Dependent Hematopoietic Stem Cell Transformation in Acute Myeloid Leukemias by Altering the Gene Expression Landscape.; Int J Mol Sci, 22: [no pages] |
|
GSE181006 |
| Chiba, Tetsuhiro et al. (2014) Disulfiram eradicates tumor-initiating hepatocellular carcinoma cells in ROS-p38 MAPK pathway-dependent and -independent manners.; PLoS One, 9: e84807 |
|
GSE42318 |
| Chibon, Frédéric et al. (2010) Validated prediction of clinical outcome in sarcomas and multiple types of cancer on the basis of a gene expression signature related to genome complexity.; Nat Med, 16: 781-7 |
|
GSE21050 |
| Chicas, Agustin et al. (2010) Dissecting the unique role of the retinoblastoma tumor suppressor during cellular senescence.; Cancer Cell, 17: 376-87 |
|
GSE19864 |
| Chicas, Agustin et al. (2012) H3K4 demethylation by Jarid1a and Jarid1b contributes to retinoblastoma-mediated gene silencing during cellular senescence.; Proc Natl Acad Sci U S A, 109: 8971-6 |
|
GSE43920 |
| Chiche, Laurent et al. (2014) Modular transcriptional repertoire analyses of adults with systemic lupus erythematosus reveal distinct type I and type II interferon signatures.; Arthritis Rheumatol, 66: 1583-95 |
|
GSE49454 |
| Chidambaram, Archana et al. (2012) Novel report of expression and function of CD97 in malignant gliomas: correlation with Wilms tumor 1 expression and glioma cell invasiveness.; J Neurosurg, 116: 843-53 |
|
GSE22578 |
| Chidiac, Rony et al. (2021) A Norrin/Wnt surrogate antibody stimulates endothelial cell barrier function and rescues retinopathy.; EMBO Mol Med, 13: e13977 |
|
GSE166764 |
| Chikuma, Shunsuke et al. (2012) TRIM28 prevents autoinflammatory T cell development in vivo.; Nat Immunol, 13: 596-603 |
|
GSE32224 |
| Chile, Thais et al. (2013) HOXB7 mRNA is overexpressed in pancreatic ductal adenocarcinomas and its knockdown induces cell cycle arrest and apoptosis.; BMC Cancer, 13: 451 |
|
GSE46393 |
| Chim, Stephen S C et al. (2012) Systematic identification of spontaneous preterm birth-associated RNA transcripts in maternal plasma.; PLoS One, 7: e34328 |
|
GSE18809 |
| Chimge, Nyam-Osor et al. (2016) RUNX1 prevents oestrogen-mediated AXIN1 suppression and ?-catenin activation in ER-positive breast cancer.; Nat Commun, 7: 10751 |
|
GSE65620 GSE65616 |
| Chin, Chui-Yoke et al. (2010) Genome wide transcriptome profiling of a murine acute melioidosis model reveals new insights into how Burkholderia pseudomallei overcomes host innate immunity.; BMC Genomics, 11: 672 |
|
GSE25074 |
| Chin, Chui-Yoke et al. (2012) Delayed activation of host innate immune pathways in streptozotocin-induced diabetic hosts leads to more severe disease during infection with Burkholderia pseudomallei.; Immunology, 135: 312-32 |
|
GSE28683 |
| Chin, Eunice Wm et al. (2022) The epigenetic reader PHF21B modulates murine social memory and synaptic plasticity-related genes.; JCI Insight, 7: [no pages] |
|
GSE201477 |
| Chin, Mark H et al. (2008) Mitochondrial dysfunction, oxidative stress, and apoptosis revealed by proteomic and transcriptomic analyses of the striata in two mouse models of Parkinson's disease.; J Proteome Res, 7: 666-77 |
|
GSE8030 |
| Chinnappa, Kaviya et al. (2022) Secondary loss ofmiR-3607reduced cortical progenitor amplification during rodent evolution.; Sci Adv, 8: eabj4010 |
|
GSE135321 |
| Chiocchetti, A G et al. [Unknown date]Transcriptomic signatures of neuronal differentiation and their association with risk genes for autism spectrum and related neuropsychiatric disorders.; Transl Psychiatry, 6: e864 |
|
GSE69838 |
| Chiot, Aude et al. (2020) Modifying macrophages at the periphery has the capacity to change microglial reactivity and to extend ALS survival.; Nat Neurosci, 23: 1339-1351 |
|
GSE156202.2 GSE156202.1 |
| Chiou, Shene et al. (2024) An immunohistochemical atlas of necroptotic pathway expression.; EMBO Mol Med, 16: 1717-1749 |
|
GSE262762 |
| Chipman, Mollie E et al. (2023) Tumor progression is independent of tumor-associated macrophages in cell lineage-based mouse models of glioblastoma.; Proc Natl Acad Sci U S A, 120: e2222084120 |
|
GSE225827 |
| Chipumuro, Edmond et al. (2014) CDK7 inhibition suppresses super-enhancer-linked oncogenic transcription in MYCN-driven cancer.; Cell, 159: 1126-39 |
|
GSE62724 |
| Chiricozzi, Andrea et al. (2011) Integrative responses to IL-17 and TNF-? in human keratinocytes account for key inflammatory pathogenic circuits in psoriasis.; J Invest Dermatol, 131: 677-87 |
|
GSE24767 |
| Chitilian, J M et al. (2014) Critical components of the pluripotency network are targets for the p300/CBP interacting protein (p/CIP) in embryonic stem cells.; Stem Cells, 32: 204-15 |
|
GSE50017 |
| Chitramuthu, Babykumari P et al. (2021) Multiple Molecular Pathways Are Influenced by Progranulin in a Neuronal Cell Model-A Parallel Omics Approach.; Front Neurosci, 15: 775391 |
|
GSE185877 |
| Chitu, Violeta et al. (2020) Microglial Homeostasis Requires Balanced CSF-1/CSF-2 Receptor Signaling.; Cell Rep, 30: 3004-3019.e5 |
|
GSE143823 |
| Chiu, Christine L et al. (2014) Identification of genes with altered expression in male and female Schlager hypertensive mice.; BMC Med Genet, 15: 101 |
|
GSE54015 |
| Chiu, Feng-Lan et al. (2015) Elucidating the role of the A2A adenosine receptor in neurodegeneration using neurons derived from Huntington's disease iPSCs.; Hum Mol Genet, 24: 6066-79 |
|
GSE59051 |
| Chiu, Isaac M et al. (2013) A neurodegeneration-specific gene-expression signature of acutely isolated microglia from an amyotrophic lateral sclerosis mouse model.; Cell Rep, 4: 385-401 |
|
GSE43366 |
| Chiu, Isaac M et al. (2013) Bacteria activate sensory neurons that modulate pain and inflammation.; Nature, 501: 52-7 |
|
GSE46546 |
| Chiu, Isaac M et al. (2014) Transcriptional profiling at whole population and single cell levels reveals somatosensory neuron molecular diversity.; Elife, 3: [no pages] |
|
GSE55114 |
| Chiu, Sung K et al. (2019) Shared roles forSclandLyl1in murine platelet production and function.; Blood, 134: 826-835 |
|
GSE125025 |
| Chiyoda, Tatsuyuki et al. (2012) Expression profiles of carcinosarcoma of the uterine corpus-are these similar to carcinoma or sarcoma?; Genes Chromosomes Cancer, 51: 229-39 |
|
GSE32507 |
| Chng, Wee J et al. (2007) Molecular dissection of hyperdiploid multiple myeloma by gene expression profiling.; Cancer Res, 67: 2982-9 |
|
GSE6477 |
| Chng, Wee J et al. (2009) Gene expression profiling of pulmonary mucosa-associated lymphoid tissue lymphoma identifies new biologic insights with potential diagnostic and therapeutic applications.; Blood, 113: 635-45 |
|
GSE13314 |
| Cho, Ahryon et al. (2014) Calcineurin signaling regulates neural induction through antagonizing the BMP pathway.; Neuron, 82: 109-24 |
|
GSE54217 |
| Cho, Byung-Sik et al. (2015) Antileukemia activity of the novel peptidic CXCR4 antagonist LY2510924 as monotherapy and in combination with chemotherapy.; Blood, 126: 222-32 |
|
GSE64623 |
| Cho, Christine E et al. (2019) A modular analysis of microglia gene expression, insights into the aged phenotype.; BMC Genomics, 20: 164 |
|
GSE109329 |
| Cho, Eunjin et al. (2019) Myocardial-specific ablation ofJumonji and AT-rich interaction domain-containing 2(Jarid2) leads to dilated cardiomyopathy in mice.; J Biol Chem, 294: 4981-4996 |
|
GSE118945 |
| Cho, Frances S et al. (2022) Enhancing GAT-3 in thalamic astrocytes promotes resilience to brain injury in rodents.; Sci Transl Med, 14: eabj4310 |
|
GSE203111 |
| Cho, Han et al. (2012) Regulation of circadian behaviour and metabolism by REV-ERB-? and REV-ERB-?.; Nature, 485: 123-7 |
|
GSE34018 |
| Cho, Heejin et al. (2023) Correction: Adnp-mutant mice with cognitive inflexibility, CaMKIIα hyperactivity, and synaptic plasticity deficits.; Mol Psychiatry, 28: 3563 |
|
GSE213354 |
| Cho, Hye-Youn et al. (2021) Transcriptomics Underlying Pulmonary Ozone Pathogenesis Regulated by Inflammatory Mediators in Mice.; Antioxidants (Basel), 10: [no pages] |
|
GSE166399 |
| Cho, Hyelim et al. (2013) Differential innate immune response programs in neuronal subtypes determine susceptibility to infection in the brain by positive-stranded RNA viruses.; Nat Med, 19: 458-64 |
|
GSE42727 |
| Cho, Hyun-Ji et al. (2022) Nintedanib induces senolytic effect via STAT3 inhibition.; Cell Death Dis, 13: 760 |
|
GSE210020 |
| Cho, Hyung Jun et al. (2007) Induction of dendritic cell-like phenotype in macrophages during foam cell formation.; Physiol Genomics, 29: 149-60 |
|
GSE7138 |
| Cho, Jae Yong et al. (2011) Gene expression signature-based prognostic risk score in gastric cancer.; Clin Cancer Res, 17: 1850-7 |
|
GSE13861 |
| Cho, Ji-Hoon et al. (2011) Systems biology of interstitial lung diseases: integration of mRNA and microRNA expression changes.; BMC Med Genomics, 4: 8 |
|
GSE21369 |
| Cho, Jin-Hyung et al. [Unknown date]RNA sequencing from neural ensembles activated during fear conditioning in the mouse temporal association cortex.; Sci Rep, 6: 31753 |
|
GSE85128 |