List of all 22,542 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Chang, Ching-yi et al. (2011) The metabolic regulator ERR?, a downstream target of HER2/IGF-1R, as a therapeutic target in breast cancer.; Cancer Cell, 20: 500-10 |
|
GSE23061 |
| Chang, Chuheng et al. (2025) Molecular Encoding of Ischemic Stroke and its Resolution after Human Neural Stem Cell Therapy by Extracellular Vesicles.; MedComm (2020), 6: e70400 |
|
GSE268442 |
| Chang, Chung-Ta et al. (2011) Comprehensive assessment of host responses to ionizing radiation by nuclear factor-?B bioluminescence imaging-guided transcriptomic analysis.; PLoS One, 6: e23682 |
|
GSE25208 |
| Chang, Edmund C et al. (2008) Estrogen Receptors alpha and beta as determinants of gene expression: influence of ligand, dose, and chromatin binding.; Mol Endocrinol, 22: 1032-43 |
|
GSE9936 |
| Chang, Howard Y et al. (2004) Gene expression signature of fibroblast serum response predicts human cancer progression: similarities between tumors and wounds.; PLoS Biol, 2: E7 |
|
GSE3945 |
| Chang, Jeffrey T et al. (2009) A genomic strategy to elucidate modules of oncogenic pathway signaling networks.; Mol Cell, 34: 104-14 |
|
GSE14934 |
| Chang, Jianjun et al. (2024) Protective role of aconitate decarboxylase 1 in neuroinflammation-induced dysfunctions of the paraventricular thalamus and sleepiness.; Commun Biol, 7: 1484 |
|
GSE280081 |
| Chang, Kae-Jiun et al. (2021) TDP-43 maximizes nerve conduction velocity by repressing a cryptic exon for paranodal junction assembly in Schwann cells.; Elife, 10: [no pages] |
|
GSE157714 |
| Chang, Katherine et al. (2025) Differential microglial responses to structurally distinct alpha-synuclein polymorphs.; Mol Brain, 19: 3 |
|
GSE305401 |
| Chang, Kun-Che et al. (2021) Posttranslational Modification of Sox11 Regulates RGC Survival and Axon Regeneration.; eNeuro, 8: [no pages] |
|
GSE160627 |
| Chang, Li-Yun et al. (2015) The Major Prognostic Features of Nuclear Receptor NR5A2 in Infiltrating Ductal Breast Carcinomas.; Int J Genomics, 2015: 403576 |
|
GSE24124 |
| Chang, Lun-Ching et al. (2014) A conserved BDNF, glutamate- and GABA-enriched gene module related to human depression identified by coexpression meta-analysis and DNA variant genome-wide association studies.; PLoS One, 9: e90980 |
|
GSE54563 GSE54567 GSE54572 GSE54562 GSE54566 GSE54575 GSE54571 GSE54565 GSE54570 GSE54564 GSE54568 |
| Chang, Matthew L et al. (2019) Regulatory interaction between the ZPBP2-ORMDL3/Zpbp2-Ormdl3 region and the circadian clock.; PLoS One, 14: e0223212 |
|
GSE136232 GSE136233 |
| Chang, Meiping et al. (2010) Evaluation of phenoxybenzamine in the CFA model of pain following gene expression studies and connectivity mapping.; Mol Pain, 6: 56 |
|
GSE24431 |
| Chang, Michael C et al. (2017) Progranulin deficiency causes impairment of autophagy and TDP-43 accumulation.; J Exp Med, 214: 2611-2628 |
|
GSE78747 GSE78748 |
| Chang, Nydia P et al. (2024) Neuronal DAMPs exacerbate neurodegeneration via astrocytic RIPK3 signaling.; JCI Insight, 9: [no pages] |
|
GSE237891 |
| Chang, Richard C et al. (2021) Programmed suppression of oxidative phosphorylation and mitochondrial function by gestational alcohol exposure correlate with widespread increases in H3K9me2 that do not suppress transcription.; Epigenetics Chromatin, 14: 27 |
|
GSE163300 |
| Chang, Richard C et al. (2023) miR-223 Plays a Key Role in Obesogen-Enhanced Adipogenesis in Mesenchymal Stem Cells and in Transgenerational Obesity.; Endocrinology, 164: [no pages] |
|
GSE216429 |
| Chang, Shujuan et al. (2026) Targeting the SIRT6-TDO2/KYNA-mTOR axis rescues synaptic and cognitive deficits in fetal growth restriction offspring.; Exp Mol Med, 58: 1987-2006 |
|
GSE298372 |
| Chang, Stewart T et al. (2011) Next-generation sequencing reveals HIV-1-mediated suppression of T cell activation and RNA processing and regulation of noncoding RNA expression in a CD4+ T cell line.; MBio, 2: [no pages] |
|
GSE38006 |
| Chang, Tammy T et al. (2012) The Rel/NF-?B pathway and transcription of immediate early genes in T cell activation are inhibited by microgravity.; J Leukoc Biol, 92: 1133-45 |
|
GSE38836 |
| Chang, Ting-Ya et al. (2017) Paxillin facilitates timely neurite initiation on soft-substrate environments by interacting with the endocytic machinery.; Elife, 6: [no pages] |
|
GSE102350 |
| Chang, Tong et al. (2023) Simulated vestibular spatial disorientation mouse model under coupled rotation revealing potential involvement of Slc17a6.; iScience, 26: 108498 |
|
GSE243471 |
| Chang, Wen-Chi L et al. (2023) Folic Acid Supplementation Promotes Hypomethylation in Both the Inflamed Colonic Mucosa and Colitis-Associated Dysplasia.; Cancers (Basel), 15: [no pages] |
|
GSE168525 |
| Chang, X et al. (2014) CD38 and E2F transcription factor 2 have uniquely increased expression in rheumatoid arthritis synovial tissues.; Clin Exp Immunol, 176: 222-231 |
|
GSE39340 |
| Chang, Xuyao et al. (2025) ZMYND11 functions in bimodal regulation of latent genes and brain-like splicing to safeguard corticogenesis.; Nat Commun, 16: 9010 |
|
GSE279072.3 |
| Chang, Yi-Cheng et al. (2022) Nr6a1 controls Hox expression dynamics and is a master regulator of vertebrate trunk development.; Nat Commun, 13: 7766 |
|
GSE180426 GSE179858 |
| Chang, Yu-Tai et al. (2023) Loss of p53 enhances the tumor-initiating potential and drug resistance of clonogenic multiple myeloma cells.; Blood Adv, 7: 3551-3560 |
|
GSE217769 |
| Chang, Yun et al. (2024) SMYD1 modulates the proliferation of multipotent cardiac progenitor cells derived from human pluripotent stem cells during myocardial differentiation through GSK3β/β-catenin&ERK signaling.; Stem Cell Res Ther, 15: 350 |
|
GSE267824 |
| Chantzichristos, Dimitrios et al. (2021) Identification of human glucocorticoid response markers using integrated multi-omic analysis from a randomized crossover trial.; Elife, 10: [no pages] |
|
GSE148639 GSE148640 |
| Chantzoura, Eleni et al. (2015) Reprogramming Roadblocks Are System Dependent.; Stem Cell Reports, 5: 350-64 |
|
GSE70816 |
| Chapman, Gareth et al. (2024) Defining cis-regulatory elements and transcription factors that control human cortical interneuron development.; iScience, 27: 109967 |
|
GSE239396 GSE239413 |
| Chapman, Joseph H et al. (2024) UPF1 ATPase autoinhibition and activation modulate RNA binding kinetics and NMD efficiency.; Nucleic Acids Res, 52: 5376-5391 |
|
GSE246484 GSE246483 |
| Chapman, Kimberly A et al. (2015) Gene expression in cell lines from propionic acidemia patients, carrier parents, and controls.; Mol Genet Metab, 115: 174-9 |
|
GSE42816 |
| Chapman, Kimberly A et al. (2025) Pathogenic variants in TMEM184B cause a neurodevelopmental syndrome associated with alteration of metabolic signaling.; Am J Hum Genet, 112: 2381-2401 |
|
GSE289220 |
| Chapman, Michael A et al. (2018) RNA-seq of newly diagnosed patients in the PADIMAC study leads to a bortezomib/lenalidomide decision signature.; Blood, 132: 2154-2165 |
|
GSE116324 |
| Chaprov, Kirill et al. (2021) A bioisostere of Dimebon/Latrepirdine delays the onset and slows the progression of pathology in FUS transgenic mice.; CNS Neurosci Ther, 27: 765-775 |
|
GSE161680 |
| Chaqour, Brahim et al. (2025) SIRT1-based therapy targets a gene program involved in mitochondrial turnover in a model of retinal neurodegeneration.; Sci Rep, 15: 13585 |
|
GSE275359 |
| Charbord, Jérémie et al. (2013) High throughput screening for inhibitors of REST in neural derivatives of human embryonic stem cells reveals a chemical compound that promotes expression of neuronal genes.; Stem Cells, 31: 1816-28 |
|
GSE40695 |
| Charbord, Pierre et al. (2014) A systems biology approach for defining the molecular framework of the hematopoietic stem cell niche.; Cell Stem Cell, 15: 376-91 |
|
GSE44181 |
| Chariker, Julia H et al. (2019) Activity/exercise-induced changes in the liver transcriptome after chronic spinal cord injury.; Sci Data, 6: 88 |
|
GSE129704 |
| Charizanis, Konstantinos et al. (2012) Muscleblind-like 2-mediated alternative splicing in the developing brain and dysregulation in myotonic dystrophy.; Neuron, 75: 437-50 |
|
GSE38497 |
| Charlap, Jeffrey H et al. (2003) Exposure-disease continuum for 2-chloro-2'-deoxyadenosine, a prototype ocular teratogen. 3. Intervention with PK11195.; Birth Defects Res A Clin Mol Teratol, 67: 108-15 |
|
GSE1068 GSE1070 |
| Charles, Edgar D et al. (2011) Clonal B cells in patients with hepatitis C virus-associated mixed cryoglobulinemia contain an expanded anergic CD21low B-cell subset.; Blood, 117: 5425-37 |
|
GSE18084 |
| Charoy, Camille et al. (2017) Genetic specification of left-right asymmetry in the diaphragm muscles and their motor innervation.; Elife, 6: [no pages] |
|
GSE84778 |
| Chartoumpekis, Dionysios V et al. (2013) Hepatic gene expression profiling in Nrf2 knockout mice after long-term high-fat diet-induced obesity.; Oxid Med Cell Longev, 2013: 340731 |
|
GSE33575 |
| Chase, Rebecca et al. (2022) Global analyses of mRNA expression in human sensory neurons reveal eIF5A as a conserved target for inflammatory pain.; FASEB J, 36: e22422 |
|
GSE192566.1 |
| Chasman, Deborah et al. (2019) Inferring Regulatory Programs Governing Region Specificity of Neuroepithelial Stem Cells during Early Hindbrain and Spinal Cord Development.; Cell Syst, 9: 167-186.e12 |
|
GSE127064 |
| Chassaing, Nicolas et al. (2016) Targeted resequencing identifies PTCH1 as a major contributor to ocular developmental anomalies and extends the SOX2 regulatory network.; Genome Res, 26: 474-85 |
|
GSE74598 |
| Chasseigneaux, Stéphanie et al. (2018) Isolation and differential transcriptome of vascular smooth muscle cells and mid-capillary pericytes from the rat brain.; Sci Rep, 8: 12272 |
|
GSE100355 |
| Chasseigneaux, Stéphanie et al. (2024) Fasting upregulates the monocarboxylate transporter MCT1 at the rat blood-brain barrier through PPAR δ activation.; Fluids Barriers CNS, 21: 33 |
|
GSE241803 |
| Chater-Diehl, Eric J et al. (2016) Alteration of Gene Expression, DNA Methylation, and Histone Methylation in Free Radical Scavenging Networks in Adult Mouse Hippocampus following Fetal Alcohol Exposure.; PLoS One, 11: e0154836 |
|
GSE66644 |
| Chatonnet, Fabrice et al. (2012) Genome-wide search reveals the existence of a limited number of thyroid hormone receptor alpha target genes in cerebellar neurons.; PLoS One, 7: e30703 |
|
GSE24793 |
| Chatterjee, Ipsita et al. (2023) CHD8 regulates gut epithelial cell function and affects autism-related behaviors through the gut-brain axis.; Transl Psychiatry, 13: 305 |
|
GSE182815 |
| Chatterjee, Jit et al. (2021) Asthma reduces glioma formation by T cell decorin-mediated inhibition of microglia.; Nat Commun, 12: 7122 |
|
GSE166551 |
| Chatterjee, Jit et al. (2024) Brain injury drives optic glioma formation through neuron-glia signaling.; Acta Neuropathol Commun, 12: 21 |
|
GSE233373 |
| Chatterjee, Namita et al. (2013) Histone deacetylase inhibitors modulate miRNA and mRNA expression, block metaphase, and induce apoptosis in inflammatory breast cancer cells.; Cancer Biol Ther, 14: 658-71 |
|
GSE28542 |
| Chatterjee, Sangya et al. (2025) Gut microbiota-derived TMAVA is a modulator of acute CNS-GVHD.; J Exp Med, 222: [no pages] |
|
GSE279739 |
| Chatterjee, Shankha S et al. (2024) Increased translation driven by non-canonical EZH2 creates a synthetic vulnerability in enzalutamide-resistant prostate cancer.; Nat Commun, 15: 9755 |
|
GSE266950 GSE266954 GSE266951 |
| Chatterjee, Snehajyoti et al. (2018) Reinstating plasticity and memory in a tauopathy mouse model with an acetyltransferase activator.; EMBO Mol Med, 10: [no pages] |
|
GSE103360 |
| Chatterjee, Snehajyoti et al. (2020) The CBP KIX domain regulates long-term memory and circadian activity.; BMC Biol, 18: 155 |
|
GSE151681 |
| Chatterjee, Snehajyoti et al. (2022) Endoplasmic reticulum chaperone genes encode effectors of long-term memory.; Sci Adv, 8: eabm6063 |
|
GSE167566 |
| Chatterjee, Snehajyoti et al. (2023) Activity-induced gene expression in the human brain.; bioRxiv, [no vol.]: [no pages] |
|
GSE224952.2 |
| Chatterjee, Sumantra et al. (2014) In vivo genome-wide analysis of multiple tissues identifies gene regulatory networks, novel functions and downstream regulatory genes for Bapx1 and its co-regulation with Sox9 in the mammalian vertebral column.; BMC Genomics, 15: 1072 |
|
GSE35898 |
| Chattopadhyay, Avik et al. (2025) Global transcriptomic profiling reveals nicotinamide metabolism as a key regulator of nitric oxide-modulated interferon-γ responses in macrophages.; Cytokine, 195: 157015 |
|
GSE286915 |
| Chaturvedi, Garima et al. (2024) Dose-Dependent Transcriptional Response to Ionizing Radiation Is Orchestrated with DNA Repair within the Nuclear Space.; Int J Mol Sci, 25: [no pages] |
|
GSE244666 |
| Chatzi, Christina et al. (2016) Transcriptional Profiling of Newly Generated Dentate Granule Cells Using TU Tagging Reveals Pattern Shifts in Gene Expression during Circuit Integration.; eNeuro, 3: [no pages] |
|
GSE76587 |
| Chau, Kevin F et al. (2018) Downregulation of ribosome biogenesis during early forebrain development.; Elife, 7: [no pages] |
|
GSE100421 |
| Chau, Michael et al. (2011) Organization of the Indian hedgehog--parathyroid hormone-related protein system in the postnatal growth plate.; J Mol Endocrinol, 47: 99-107 |
|
GSE23432 |
| Chaudhuri, Amrita Datta et al. (2013) MicroRNA-142 reduces monoamine oxidase A expression and activity in neuronal cells by downregulating SIRT1.; PLoS One, 8: e79579 |
|
GSE50133.2 |
| Chauhan, Dharminder et al. (2012) A small molecule inhibitor of ubiquitin-specific protease-7 induces apoptosis in multiple myeloma cells and overcomes bortezomib resistance.; Cancer Cell, 22: 345-58 |
|
GSE39754 |
| Chauhan, Vinita et al. (2014) Identification of gene-based responses in human blood cells exposed to alpha particle radiation.; BMC Med Genomics, 7: 43 |
|
GSE80547 |
| Chaunsali, Lata et al. (2025) Degradation of perineuronal nets in hippocampal CA2 explains the loss of social cognition memory in Alzheimer's disease.; Alzheimers Dement, 21: e70813 |
|
GSE317499 |
| Chaussabel, Damien et al. (2003) Unique gene expression profiles of human macrophages and dendritic cells to phylogenetically distinct parasites.; Blood, 102: 672-81 |
|
GSE360 |
| Chaussé, Anne-Marie et al. (2023) Epithelial cell invasion bysalmonellatyphimurium induces modulation of genes controlled by aryl hydrocarbon receptor signaling and involved in extracellular matrix biogenesis.; Virulence, 14: 2158663 |
|
GSE151881 |
| Chauvin, Céline et al. (2017) High-Throughput Drug Screening Identifies Pazopanib and Clofilium Tosylate as Promising Treatments for Malignant Rhabdoid Tumors.; Cell Rep, 21: 1737-1745 |
|
GSE102467 |
| Chauvistré, Heike et al. (2022) Persister state-directed transitioning and vulnerability in melanoma.; Nat Commun, 13: 3055 |
|
GSE138068 |
| Chavarria-Smith, Joseph et al. (2022) Dual antibody inhibition of KLK5 and KLK7 for Netherton syndrome and atopic dermatitis.; Sci Transl Med, 14: eabp9159 |
|
GSE205531 GSE205530 |
| Chavdoula, Evangelia et al. (2023) Transcriptional regulation of amino acid metabolism by KDM2B, in the context of ncPRC1.1 and in concert with MYC and ATF4.; bioRxiv, [no vol.]: [no pages] |
|
GSE245824 |
| Chavez, Jessenia et al. (2026) The Zinc-Finger Protein POGZ Associates with Polycomb Repressive Complex 1 to Regulate Bone Morphogenetic Protein Signaling During Neuronal Differentiation.; Stem Cell Rev Rep, 22: 1371-1387 |
|
GSE281010 |