List of all 22,542 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Cho, Hye-Youn et al. (2012) Targeted deletion of nrf2 impairs lung development and oxidant injury in neonatal mice.; Antioxid Redox Signal, 17: 1066-82 |
|
GSE29632 |
| Cho, Hyelim et al. (2013) Differential innate immune response programs in neuronal subtypes determine susceptibility to infection in the brain by positive-stranded RNA viruses.; Nat Med, 19: 458-64 |
|
GSE42727 |
| Cho, Hyun-Ji et al. (2022) Nintedanib induces senolytic effect via STAT3 inhibition.; Cell Death Dis, 13: 760 |
|
GSE210020 |
| Cho, Hyung Jun et al. (2007) Induction of dendritic cell-like phenotype in macrophages during foam cell formation.; Physiol Genomics, 29: 149-60 |
|
GSE7138 |
| Cho, Jae Yong et al. (2011) Gene expression signature-based prognostic risk score in gastric cancer.; Clin Cancer Res, 17: 1850-7 |
|
GSE13861 |
| Cho, Ji-Hoon et al. (2011) Systems biology of interstitial lung diseases: integration of mRNA and microRNA expression changes.; BMC Med Genomics, 4: 8 |
|
GSE21369 |
| Cho, Jin-Hyung et al. (2016) RNA sequencing from neural ensembles activated during fear conditioning in the mouse temporal association cortex.; Sci Rep, 6: 31753 |
|
GSE85128 |
| Cho, Joonho et al. (2025) Enhanced differentiation of neural progenitor cells in Alzheimer's disease into vulnerable immature neurons.; iScience, 28: 112446 |
|
GSE274912 |
| Cho, Jun et al. (2015) Multiple repressive mechanisms in the hippocampus during memory formation.; Science, 350: 82-7 |
|
GSE72064.2 |
| Cho, Jung-Hyun et al. (2022) RKIP Induction Promotes Tumor Differentiation via SOX2 Degradation in NF2-Deficient Conditions.; Mol Cancer Res, 20: 412-424 |
|
GSE186107 |
| Cho, KyoungJoo et al. (2021) Suppressor of cytokine signaling 2 is induced in Huntington's disease and involved in autophagy.; Biochem Biophys Res Commun, 559: 21-27 |
|
GSE276407 |
| Cho, Namjoon et al. (2023) A novel splicing variant of DJ-1 in Parkinson's disease induces mitochondrial dysfunction.; Heliyon, 9: e14039 |
|
GSE206961 |
| Cho, Seo-Hyun et al. (2015) SIRT1 deficiency in microglia contributes to cognitive decline in aging and neurodegeneration via epigenetic regulation of IL-1?.; J Neurosci, 35: 807-18 |
|
GSE56452 |
| Cho, Seung Woo et al. (2018) Promoter of lncRNA Gene PVT1 Is a Tumor-Suppressor DNA Boundary Element.; Cell, 173: 1398-1412.e22 |
|
GSE106197 |
| Cho, Woo Hyun et al. (2025) PRC2 Restricts Malignant Peripheral Nerve Sheath Tumorigenesis in a Genetically Engineered Mouse Model of MPNST.; bioRxiv, [no vol.]: [no pages] |
|
GSE226980 |
| Cho, Yongcheol et al. (2015) Activating Injury-Responsive Genes with Hypoxia Enhances Axon Regeneration through Neuronal HIF-1?.; Neuron, 88: 720-34 |
|
GSE73415 |
| Cho, Young-Wook et al. (2023) Thyroid hormone-regulated chromatin landscape and transcriptional sensitivity of the pituitary gland.; Commun Biol, 6: 1253 |
|
GSE197703 |
| Cho, Youngkyung et al. (2020) Intramembrane proteolysis of an extracellular serine protease, epithin/PRSS14, enables its intracellular nuclear function.; BMC Biol, 18: 60 |
|
GSE114602 |
| Cho, Youngmi et al. (2011) A chemoprotective fish oil- and pectin-containing diet temporally alters gene expression profiles in exfoliated rat colonocytes throughout oncogenesis.; J Nutr, 141: 1029-35 |
|
GSE27266 |
| Chodankar, Rajas et al. (2014) Hic-5 is a transcription coregulator that acts before and/or after glucocorticoid receptor genome occupancy in a gene-selective manner.; Proc Natl Acad Sci U S A, 111: 4007-12 |
|
GSE46448 |
| Choe, Joshua H et al. (2023) Li-Fraumeni Syndrome-Associated Dimer-Forming Mutant p53 Promotes Transactivation-Independent Mitochondrial Cell Death.; Cancer Discov, 13: 1250-1273 |
|
GSE226406.2 GSE226389 GSE226406.1 |
| Choi, Bo-Ran et al. (2020) GDE2-Dependent Activation of Canonical Wnt Signaling in Neurons Regulates Oligodendrocyte Maturation.; Cell Rep, 31: 107540 |
|
GSE147144 |
| Choi, Byung Jo et al. (2025) HDL-bound S1P affects the subventricular niche and early neuropathological features of Alzheimer's disease.; Nat Commun, 16: 5728 |
|
GSE268304 |
| Choi, Chan-Il et al. (2026) Regional Molecular Diversity in Chronic Spinal Cord Injury.; Cell Mol Neurobiol, 46: [no pages] |
|
GSE319931 |
| Choi, Chiyeol et al. (2021) DSCR1 upregulation enhances dural meningeal lymphatic drainage to attenuate amyloid pathology of Alzheimer's disease.; J Pathol, 255: 296-310 |
|
GSE180275 |
| Choi, Dong-Joo et al. (2026) Astrocytic Sox9 overexpression in Alzheimer's disease mouse models promotes Aβ plaque phagocytosis and preserves cognitive function.; Nat Neurosci, 29: 88-99 |
|
GSE294900.1 GSE294900.2 GSE294900.3 |
| Choi, Esther Sue et al. (2024) Unveiling the double-edged sword: SOD1 trimers possess tissue-selective toxicity and bind septin-7 in motor neuron-like cells.; Structure, 32: 1776-1792.e5 |
|
GSE263048 |
| Choi, Eun-Bee et al. (2023) Transcription factor SOX15 regulates stem cell pluripotency and promotes neural fate during differentiation by activating the neurogenic gene Hes5.; J Biol Chem, 299: 102996 |
|
GSE200687 |
| Choi, Hong Seok et al. (2025) Vasopressin-Sensitive Aqp2 Regulation Mediated by the TAZ-NR4A1 Axis in Renal Collecting Duct Cells.; FASEB J, 39: e70771 |
|
GSE274937 |
| Choi, Hyejin et al. (2015) Transcriptome analysis of individual stromal cell populations identifies stroma-tumor crosstalk in mouse lung cancer model.; Cell Rep, 10: 1187-201 |
|
GSE59831 |
| Choi, Hyejin et al. (2019) Pulsatile MEK Inhibition Improves Anti-tumor Immunity and T Cell Function in Murine Kras Mutant Lung Cancer.; Cell Rep, 27: 806-819.e5 |
|
GSE126202 |
| Choi, Hyun Woo et al. (2017) In vivo differentiation of induced pluripotent stem cells into neural stem cells by chimera formation.; PLoS One, 12: e0170735 |
|
GSE87597 |
| Choi, Hyung Jin et al. (2012) Human transcriptome analysis of acute responses to glucose ingestion reveals the role of leukocytes in hyperglycemia-induced inflammation.; Physiol Genomics, 44: 1179-87 |
|
GSE32909 |
| Choi, In-Young et al. (2024) Seizure-induced LIN28A disrupts pattern separation via aberrant hippocampal neurogenesis.; JCI Insight, 9: [no pages] |
|
GSE246519 |
| Choi, Insup et al. (2023) Autophagy enables microglia to engage amyloid plaques and prevents microglial senescence.; Nat Cell Biol, 25: 963-974 |
|
GSE192964.1 |
| Choi, Jang Hyun et al. (2020) Histone demethylase KDM4D cooperates with NFIB and MLL1 complex to regulate adipogenic differentiation of C3H10T1/2 mesenchymal stem cells.; Sci Rep, 10: 3050 |
|
GSE131369 |
| Choi, Janghyun et al. (2023) NFIB-MLL1 complex is required for the stemness and Dlx5-dependent osteogenic differentiation of C3H10T1/2 mesenchymal stem cells.; J Biol Chem, 299: 105193 |
|
GSE227537 |
| Choi, Jiye et al. (2024) ARNT2 controls prefrontal somatostatin interneurons mediating affective empathy.; Cell Rep, 43: 114659 |
|
GSE248193 |
| Choi, Jiyeon et al. (2020) Massively parallel reporter assays of melanoma risk variants identify MX2 as a gene promoting melanoma.; Nat Commun, 11: 2718 |
|
GSE149161 GSE129237 |
| Choi, Kyung-Dal et al. (2012) Identification of the hemogenic endothelial progenitor and its direct precursor in human pluripotent stem cell differentiation cultures.; Cell Rep, 2: 553-67 |
|
GSE39661 |
| Choi, Seo Yoon et al. (2024) Oligonol enhances brain cognitive function in high-fat diet-fed mice.; Biomed Pharmacother, 179: 117322 |
|
GSE274616 |
| Choi, Seong Hee et al. (2024) DRG2 is required for surface localization of PD-L1 and the efficacy of anti-PD-1 therapy.; Cell Death Discov, 10: 260 |
|
GSE231972 |
| Choi, Seung H et al. (2022) RBM45 is an m6A-binding protein that affects neuronal differentiation and the splicing of a subset of mRNAs.; Cell Rep, 40: 111293 |
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GSE190292 GSE190322 GSE190316 |
| Choi, Seung Woo et al. (2023) Therapeutic Extracellular Vesicles from Tonsil-Derived Mesenchymal Stem Cells for the Treatment of Retinal Degenerative Disease.; Tissue Eng Regen Med, 20: 951-964 |
|
GSE224328 |
| Choi, Seung-Chul et al. (2018) Inhibition of glucose metabolism selectively targets autoreactive follicular helper T cells.; Nat Commun, 9: 4369 |
|
GSE106455 |
| Choi, Si Ho et al. (2016) DUX4 recruits p300/CBP through its C-terminus and induces global H3K27 acetylation changes.; Nucleic Acids Res, 44: 5161-73 |
|
GSE78158 |
| Choi, Soon Gang et al. (2014) Growth differentiation factor 9 (GDF9) forms an incoherent feed-forward loop modulating follicle-stimulating hormone β-subunit (FSHβ) gene expression.; J Biol Chem, 289: 16164-75 |
|
GSE52631 |
| Choi, Sora et al. (2024) Molecular targets of PXR-dependent ethanol-induced hepatotoxicity in female mice.; Biochem Pharmacol, 228: 116416 |
|
GSE239714 |
| Choi, Sujin et al. (2025) Effects of fluoxetine on the gene expression of hippocampus and gap inhibition in noise-induced hearing loss rats.; Eur J Pharmacol, 996: 177565 |
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GSE280972 |
| Choi, Sung Kyung et al. (2020) SMARCB1 Acts as a Quiescent Gatekeeper for Cell Cycle and Immune Response in Human Cells.; Int J Mol Sci, 21: [no pages] |
|
GSE120831 |
| Choi, Tae-Yong et al. (2024) Distinct prefrontal projection activity and transcriptional state conversely orchestrate social competition and hierarchy.; Neuron, 112: 611-627.e8 |
|
GSE222185 |
| Choi, Wonseon et al. (2010) Regulation of human skin pigmentation in situ by repetitive UV exposure: molecular characterization of responses to UVA and/or UVB.; J Invest Dermatol, 130: 1685-96 |
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GSE21429 |
| Choi, Wonyoung et al. (2024) RFX4 is an intrinsic factor for neuronal differentiation through induction of proneural genes POU3F2 and NEUROD1.; Cell Mol Life Sci, 81: 99 |
|
GSE233117 |
| Choi, Woonyoung et al. (2014) Identification of distinct basal and luminal subtypes of muscle-invasive bladder cancer with different sensitivities to frontline chemotherapy.; Cancer Cell, 25: 152-65 |
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GSE48124 GSE47992 |
| Choi, Yeeun et al. (2021) Liver-Specific Deletion of Mouse CTCF Leads to Hepatic Steatosis via Augmented PPARγ Signaling.; Cell Mol Gastroenterol Hepatol, [no vol.]: [no pages] |
|
GSE151501 |
| Choi, Yeong-Gon et al. (2011) Changes of gene expression profiles in the cervical spinal cord by acupuncture in an MPTP-intoxicated mouse model: microarray analysis.; Gene, 481: 7-16 |
|
GSE24830 |
| Choi, Yeong-Gon et al. (2011) Neuroprotective changes of striatal degeneration-related gene expression by acupuncture in an MPTP mouse model of Parkinsonism: microarray analysis.; Cell Mol Neurobiol, 31: 377-91 |
|
GSE24829 |
| Choi, Yun-Sik et al. (2017) Mitogen- and Stress-Activated Protein Kinase 1 Regulates Status Epilepticus-Evoked Cell Death in the Hippocampus.; ASN Neuro, 9: 1759091417726607 |
|
GSE98751 |
| Choksey, Anurag et al. (2024) AICAR confers prophylactic cardioprotection in doxorubicin-induced heart failure in rats.; J Mol Cell Cardiol, 191: 12-22 |
|
GSE218397 |
| Chokshi, Chirayu R et al. (2024) Targeting axonal guidance dependencies in glioblastoma with ROBO1 CAR T cells.; Nat Med, 30: 2936-2946 |
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GSE240490 |
| Choksi, Semil P et al. (2024) An alternative cell cycle coordinates multiciliated cell differentiation.; Nature, 630: 214-221 |
|
GSE228108 |
| Cholewa-Waclaw, Justyna et al. (2019) Quantitative modelling predicts the impact of DNA methylation on RNA polymerase II traffic.; Proc Natl Acad Sci U S A, 116: 14995-15000 |
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GSE126640 |
| Chomyk, Anthony et al. (2024) Transcript Profiles of Microglia/Macrophage Cells at the Borders of Chronic Active and Subpial Gray Matter Lesions in Multiple Sclerosis.; Ann Neurol, 95: 907-916 |
|
GSE255290 |
| Chong, Jean-Leon et al. (2009) E2f1-3 switch from activators in progenitor cells to repressors in differentiating cells.; Nature, 462: 930-4 |
|
GSE16454 |
| Chong, Wai C et al. (2021) Atypical Teratoid Rhabdoid Tumours Are Susceptible to Panobinostat-Mediated Differentiation Therapy.; Cancers (Basel), 13: [no pages] |
|
GSE276501 |
| Chong, Yee Song et al. (2022) Distinct contributions of ventral CA1/amygdala co-activation to the induction and maintenance of synaptic plasticity.; Cereb Cortex, [no vol.]: [no pages] |
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GSE197708 |
| Chong, Yuk Kien et al. (2016) ST3GAL1-Associated Transcriptomic Program in Glioblastoma Tumor Growth, Invasion, and Prognosis.; J Natl Cancer Inst, 108: [no pages] |
|
GSE51395 |
| Chongtham, Anjalika et al. (2025) Neocortical tau propagation is a mediator of clinical heterogeneity in Alzheimer's disease.; Mol Psychiatry, [no vol.]: [no pages] |
|
GSE282910 |
| Choo, Munki et al. (2023) Involvement of cell shape and lipid metabolism in glioblastoma resistance to temozolomide.; Acta Pharmacol Sin, 44: 670-679 |
|
GSE193957 |
| Chopin, Michaël et al. (2019) Transcription Factor PU.1 Promotes Conventional Dendritic Cell Identity and Function via Induction of Transcriptional Regulator DC-SCRIPT.; Immunity, 50: 77-90.e5 |
|
GSE121446 |
| Choquet, Caroline et al. (2018) Deletion of Nkx2-5 in trabecular myocardium reveals the developmental origins of pathological heterogeneity associated with ventricular non-compaction cardiomyopathy.; PLoS Genet, 14: e1007502 |
|
GSE113251 |
| Chorley, Brian et al. (2014) The cellular and genomic response of rat dopaminergic neurons (N27) to coated nanosilver.; Neurotoxicology, 45: 12-21 |
|
GSE48087 |
| Choteau, L et al. (2016) Role of mannose-binding lectin in intestinal homeostasis and fungal elimination.; Mucosal Immunol, 9: 767-76 |
|
GSE68852 |
| Chothani, Sonia P et al. (2022) A high-resolution map of human RNA translation.; Mol Cell, 82: 2885-2899.e8 |
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GSE182371 GSE182372 |
| Chou, Ching-Heng et al. (2013) Genome-wide expression profiles of subchondral bone in osteoarthritis.; Arthritis Res Ther, 15: R190 |
|
GSE51588 |
| Chou, Chun et al. (2014) c-Myc-induced transcription factor AP4 is required for host protection mediated by CD8+ T cells.; Nat Immunol, 15: 884-93 |
|
GSE58079 |
| Chou, Danny Hung-Chieh et al. (2015) Kinase-Independent Small-Molecule Inhibition of JAK-STAT Signaling.; J Am Chem Soc, 137: 7929-34 |
|
GSE42897 |
| Chou, Ming-Yi et al. (2022) Mouse hybrid genome mediates diverse brain phenotypes with the specificity of reciprocal crosses.; FASEB J, 36: e22232 |
|
GSE119876 GSE160575 |
| Chou, Shao-Pei et al. (2022) Genetic dissection of the RNA polymerase II transcription cycle.; Elife, 11: [no pages] |
|
GSE174171 |
| Chou, Vicky et al. (2023) INPP5D regulates inflammasome activation in human microglia.; Nat Commun, 14: 7552 |
|
GSE244209 |
| Choudhary, Bikash et al. (2024) Conserved role for spliceosomal component PRPF40A in microexon splicing.; bioRxiv, [no vol.]: [no pages] |
|
GSE267257 |
| Choudhary, Shilpa et al. (2016) Serum Amyloid A3 Secreted by Preosteoclasts Inhibits Parathyroid Hormone-stimulated cAMP Signaling in Murine Osteoblasts.; J Biol Chem, 291: 3882-94 |
|
GSE72047 |
| Choudhury, Mohammed E et al. (2026) A Dopamine D1-Like Receptor Agonist Ameliorates Traumatic Brain Injury Through its Immunosuppressive Effects.; Cell Mol Neurobiol, 46: [no pages] |
|
GSE298938 |
| Choudhury, Yukti et al. (2017) Patient-specific hepatocyte-like cells derived from induced pluripotent stem cells model pazopanib-mediated hepatotoxicity.; Sci Rep, 7: 41238 |
|
GSE75888 |
| Chougoni, Kranthi Kumar et al. (2023) Coordinate transcriptional regulation of ErbB2/3 by C-terminal binding protein 2 signals sensitivity to ErbB2 inhibition in pancreatic adenocarcinoma.; Oncogenesis, 12: 53 |
|
GSE228625 |
| Chow, Kwan T et al. (2013) MK5 activates Rag transcription via Foxo1 in developing B cells.; J Exp Med, 210: 1621-34 |
|
GSE46031 |
| Chow, Lionel M L et al. (2011) Cooperativity within and among Pten, p53, and Rb pathways induces high-grade astrocytoma in adult brain.; Cancer Cell, 19: 305-16 |
|
GSE22927.2 GSE22927.1 |
| Chow, Lisa S et al. (2007) Impact of endurance training on murine spontaneous activity, muscle mitochondrial DNA abundance, gene transcripts, and function.; J Appl Physiol (1985), 102: 1078-89 |
|
GSE5297 |
| Chow, Maggie L et al. (2012) Preprocessing and Quality Control Strategies for Illumina DASL Assay-Based Brain Gene Expression Studies with Semi-Degraded Samples.; Front Genet, 3: 11 |
|
GSE28475 |