List of all 16,767 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Darbo, Elodie et al. (2023) Distinct Cellular Origins and Differentiation Process Account for Distinct Oncogenic and Clinical Behaviors of Leiomyosarcomas.; Cancers (Basel), 15: [no pages] |
|
GSE159848 GSE159847 |
| Dardenne, Etienne et al. (2016) N-Myc Induces an EZH2-Mediated Transcriptional Program Driving Neuroendocrine Prostate Cancer.; Cancer Cell, 30: 563-577 |
|
GSE86532.2 GSE86532.1 |
| Darland, Diane C et al. (2011) Vascular endothelial growth factor (VEGF) isoform regulation of early forebrain development.; Dev Biol, 358: 9-22 |
|
GSE30767 |
| Darnell, Jennifer C et al. (2011) FMRP stalls ribosomal translocation on mRNAs linked to synaptic function and autism.; Cell, 146: 247-61 |
|
GSE26745 |
| Darragh, Laurel B et al. (2022) Elective nodal irradiation mitigates local and systemic immunity generated by combination radiation and immunotherapy in head and neck tumors.; Nat Commun, 13: 7015 |
|
GSE210287 |
| Darwich, Nabil F et al. (2020) Autosomal dominant VCP hypomorph mutation impairs disaggregation of PHF-tau.; Science, 370: [no pages] |
|
GSE156831 |
| Das Sharma, Sohani et al. (2019) Widespread Alterations in Translation Elongation in the Brain of Juvenile Fmr1 Knockout Mice.; Cell Rep, 26: 3313-3322.e5 |
|
GSE114064 |
| Das, Amitabh et al. (2017) FTY720 (fingolimod) regulates key target genes essential for inflammation in microglial cells as defined by high-resolution mRNA sequencing.; Neuropharmacology, 119: 1-14 |
|
GSE90932 |
| Das, Amitabh et al. (2017) RNA sequencing reveals resistance of TLR4 ligand-activated microglial cells to inflammation mediated by the selective jumonji H3K27 demethylase inhibitor.; Sci Rep, 7: 6554 |
|
GSE89817 |
| Das, Amitabh et al. [Unknown date]Transcriptome sequencing reveals that LPS-triggered transcriptional responses in established microglia BV2 cell lines are poorly representative of primary microglia.; J Neuroinflammation, 13: 182 |
|
GSE79898 GSE80304 |
| Das, Debamitra et al. (2021) Transcriptome analysis of human induced excitatory neurons supports a strong effect of clozapine on cholesterol biosynthesis.; Schizophr Res, 228: 324-326 |
|
GSE163161 |
| Das, Yannick et al. (2021) Peroxisomal Multifunctional Protein 2 Deficiency Perturbs Lipid Homeostasis in the Retina and Causes Visual Dysfunction in Mice.; Front Cell Dev Biol, 9: 632930 |
|
GSE163770 |
| DasBanerjee, Tania et al. (2008) A comparison of molecular alterations in environmental and genetic rat models of ADHD: a pilot study.; Am J Med Genet B Neuropsychiatr Genet, 147B: 1554-63 |
|
GSE12457 |
| Dasgupta, Krishnakali et al. (2019) Molecular patterning of the embryonic cranial mesenchyme revealed by genome-wide transcriptional profiling.; Dev Biol, 455: 434-448 |
|
GSE128379 |
| Dasgupta, Nupur et al. (2013) Gaucher disease: transcriptome analyses using microarray or mRNA sequencing in a Gba1 mutant mouse model treated with velaglucerase alfa or imiglucerase.; PLoS One, 8: e74912 |
|
GSE44569 |
| Dasgupta, Twishasri et al. (2015) Gene Expression Analyses during Spontaneous Reversal of Cardiomyopathy in Mice with Repressed Nuclear CUG-BP, Elav-Like Family (CELF) Activity in Heart Muscle.; PLoS One, 10: e0124462 |
|
GSE62363 |
| Dash, Banaja P et al. (2020) Genome Wide Analysis Points towards Subtype-Specific Diseases in Different Genetic Forms of Amyotrophic Lateral Sclerosis.; Int J Mol Sci, 21: [no pages] |
|
GSE158264 |
| Dash, Banaja P et al. (2022) Downstream Effects of Mutations inSOD1andTARDBPConverge on Gene Expression Impairment in Patient-Derived Motor Neurons.; Int J Mol Sci, 23: [no pages] |
|
GSE210969 |
| Dash, Sweta et al. (2021) Effects of long-term norepinephrine treatment on normal immortalized ovarian and fallopian tube cells.; Sci Rep, 11: 14334 |
|
GSE168097 |
| Daskalakis, Nikolaos P et al. (2014) Expression profiling associates blood and brain glucocorticoid receptor signaling with trauma-related individual differences in both sexes.; Proc Natl Acad Sci U S A, 111: 13529-34 |
|
GSE60280 GSE60303 GSE60302 |
| Dassi, Erik et al. (2015) Translational compensation of genomic instability in neuroblastoma.; Sci Rep, 5: 14364 |
|
GSE56552 |
| Daswani, Reetu et al. (2022) MicroRNA-138 controls hippocampal interneuron function and short-term memory in mice.; Elife, 11: [no pages] |
|
GSE173982 |
| Datta, Moumita et al. (2018) Histone Deacetylases 1 and 2 Regulate Microglia Function during Development, Homeostasis, and Neurodegeneration in a Context-Dependent Manner.; Immunity, 48: 514-529.e6 |
|
GSE98822 GSE96622 |
| Dattilo, Dario et al. (2023) The m6A reader YTHDC1 and the RNA helicase DDX5 control the production of rhabdomyosarcoma-enriched circRNAs.; Nat Commun, 14: 1898 |
|
GSE207453 |
| Daugherty, Daniel et al. (2017) A novel Alzheimer's disease drug candidate targeting inflammation and fatty acid metabolism.; Alzheimers Res Ther, 9: 50 |
|
GSE93678 |
| Daum, Janine M et al. [Unknown date]The formation of the light-sensing compartment of cone photoreceptors coincides with a transcriptional switch.; Elife, 6: [no pages] |
|
GSE97534 |
| Dauphinot, L et al. (2005) The cerebellar transcriptome during postnatal development of the Ts1Cje mouse, a segmental trisomy model for Down syndrome.; Hum Mol Genet, 14: 373-84 |
|
GSE11472 GSE1611 |
| Davaapil, Hongorzul et al. (2023) PRELP secreted from mural cells protects the function of blood brain barrier through regulation of endothelial cell-cell integrity.; Front Cell Dev Biol, 11: 1147625 |
|
GSE199118 |
| Davalos, Veronica et al. (2023) An epigenetic switch controls an alternative NR2F2 isoform that unleashes a metastatic program in melanoma.; Nat Commun, 14: 1867 |
|
GSE102553 |
| Dave, Biren M et al. (2023) Directed differentiation of human hindbrain neuroepithelial stem cells recapitulates cerebellar granule neurogenesis.; Development, 150: [no pages] |
|
GSE233337 |
| Dave, Jui M et al. (2024) Loss of TGFβ-Mediated Repression of Angiopoietin-2 in Pericytes Underlies Germinal Matrix Hemorrhage Pathogenesis.; Stroke, 55: 2340-2352 |
|
GSE269066 |
| Davezac, Morgane et al. (2023) The different natural estrogens promote endothelial healing through distinct cell targets.; JCI Insight, 8: [no pages] |
|
GSE154268 |
| David, Jonathan et al. (2009) Inflammatory gene expression in response to sub-lethal ricin exposure in Balb/c mice.; Toxicology, 264: 119-30 |
|
GSE17431 GSE17249 |
| David, Jonathan et al. (2012) Gene expression following low dose inhalational Francisella tularensis (SchuS4) exposure in Balb/c mice and the potential role of the epithelium and cell adhesion.; Microbes Infect, 14: 369-79 |
|
GSE17248 |
| David, Jonathan et al. (2014) The use of a three-dimensional cell culture model to investigate host-pathogen interactions of Francisella tularensis in human lung epithelial cells.; Microbes Infect, 16: 735-45 |
|
GSE40808 |
| Davidson, Dennis et al. (2013) Differential effect of exogenous interleukin-10 versus glucocorticoids on gene expression and pro-inflammatory cytokine release by polymorphonuclear leukocytes and monocytes of the newly born.; Am J Transl Res, 5: 103-15 |
|
GSE35683 |
| Davidson, Lee et al. (2019) Rapid Depletion of DIS3, EXOSC10, or XRN2 Reveals the Immediate Impact of Exoribonucleolysis on Nuclear RNA Metabolism and Transcriptional Control.; Cell Rep, 26: 2779-2791.e5 |
|
GSE120574 |
| Davidson, Molly E et al. (2009) D-Serine exposure resulted in gene expression changes implicated in neurodegenerative disorders and neuronal dysfunction in male Fischer 344 rats.; Arch Toxicol, 83: 747-62 |
|
GSE10748 |
| Davidson, Rebecca K et al. (2020) The loss of STAT3 in mature osteoclasts has detrimental effects on bone structure.; PLoS One, 15: e0236891 |
|
GSE152986 |
| Davidson, Sophia et al. (2014) Pathogenic potential of interferon ?? in acute influenza infection.; Nat Commun, 5: 3864 |
|
GSE55403 |
| Davies, Claire L et al. (2019) Myeloid Cell and Transcriptome Signatures Associated With Inflammation Resolution in a Model of Self-Limiting Acute Brain Inflammation.; Front Immunol, 10: 1048 |
|
GSE122815 |
| Davies, Jeff S et al. (2011) Selective genomic targeting by FRA-2/FOSL2 transcription factor: regulation of the Rgs4 gene is mediated by a variant activator protein 1 (AP-1) promoter sequence/CREB-binding protein (CBP) mechanism.; J Biol Chem, 286: 15227-39 |
|
GSE12341 GSE12343 GSE12342 |
| Davis, Joanne N et al. (2005) Disruption of Rb/E2F pathway results in increased cyclooxygenase-2 expression and activity in prostate epithelial cells.; Cancer Res, 65: 3633-42 |
|
GSE934 |
| Davis, R Eric et al. (2010) Chronic active B-cell-receptor signalling in diffuse large B-cell lymphoma.; Nature, 463: 88-92 |
|
GSE18817 |
| Davis, Richard C et al. (2012) Systems genetics of susceptibility to obesity-induced diabetes in mice.; Physiol Genomics, 44: 1-13 |
|
GSE30140 |
| Dawany, Noor et al. (2014) Identification of a 251 gene expression signature that can accurately detect M. tuberculosis in patients with and without HIV co-infection.; PLoS One, 9: e89925 |
|
GSE50834 |
| Dawes, John M et al. (2014) Genome-wide transcriptional profiling of skin and dorsal root ganglia after ultraviolet-B-induced inflammation.; PLoS One, 9: e93338 |
|
GSE54413.2 GSE54413.1 |
| Dawicki-McKenna, Jennine M et al. (2023) Mapping PTBP2 binding in human brain identifies SYNGAP1 as a target for therapeutic splice switching.; Nat Commun, 14: 2628 |
|
GSE206660 |
| Day, Emily A et al. (2023) Macrophage AMPK β1 activation by PF-06409577 reduces the inflammatory response, cholesterol synthesis, and atherosclerosis in mice.; iScience, 26: 108269 |
|
GSE242663 |
| Day, Roger S et al. (2011) Identifier mapping performance for integrating transcriptomics and proteomics experimental results.; BMC Bioinformatics, 12: 213 |
|
GSE17025 |
| De Abrew, K Nadira et al. (2010) An integrated genomic analysis of aryl hydrocarbon receptor-mediated inhibition of B-cell differentiation.; Toxicol Sci, 118: 454-69 |
|
GSE21272 |
| De Abrew, K Nadira et al. (2015) A novel transcriptomics based in vitro method to compare and predict hepatotoxicity based on mode of action.; Toxicology, 328: 29-39 |
|
GSE40348 |
| De Abrew, K Nadira et al. [Unknown date]Grouping 34 Chemicals Based on Mode of Action Using Connectivity Mapping.; Toxicol Sci, 151: 447-61 |
|
GSE69845 |
| de Almeida Magalhães, Taciani et al. (2023) Activation of Hedgehog signaling by the oncogenic RELA fusion reveals a primary cilia-dependent vulnerability in supratentorial ependymoma.; Neuro Oncol, 25: 185-198 |
|
GSE181162 |
| De Arcangelis, Adèle et al. (2017) Hemidesmosome integrity protects the colon against colitis and colorectal cancer.; Gut, 66: 1748-1760 |
|
GSE70700 |
| De Arras, Lesly et al. (2012) Spatiotemporal inhibition of innate immunity signaling by the Tbc1d23 RAB-GAP.; J Immunol, 188: 2905-13 |
|
GSE30840 |
| De Bacco, Francesca et al. (2012) The MET oncogene is a functional marker of a glioblastoma stem cell subtype.; Cancer Res, 72: 4537-50 |
|
GSE36426 |
| de Baumont, Angelica et al. (2015) Innate immune response is differentially dysregulated between bipolar disease and schizophrenia.; Schizophr Res, 161: 215-21 |
|
GSE62191 |
| De Berdt, P et al. (2022) The human dental apical papilla promotes spinal cord repair through a paracrine mechanism.; Cell Mol Life Sci, 79: 252 |
|
GSE191140 |
| De Bock, Katrien et al. (2013) Role of PFKFB3-driven glycolysis in vessel sprouting.; Cell, 154: 651-63 |
|
GSE45750 |
| de Bont, Judith M et al. (2008) Differential expression and prognostic significance of SOX genes in pediatric medulloblastoma and ependymoma identified by microarray analysis.; Neuro Oncol, 10: 648-60 |
|
GSE74195 |
| De Bruyckere, Elodie et al. (2018) Stability and Function of Hippocampal Mossy Fiber Synapses Depend onBcl11b/Ctip2.; Front Mol Neurosci, 11: 103 |
|
GSE111494 |
| De Burghgrave, Marine et al. (2022) Pancreatic Islet Cells Response to IFNγ Relies on Their Spatial Location within an Islet.; Cells, 12: [no pages] |
|
GSE221081 GSE221078 |
| de Carvalho, Elisandra Grangeiro et al. (2011) Limited response of NK92 cells to Plasmodium falciparum-infected erythrocytes.; Malar J, 10: 311 |
|
GSE26876 |
| De Cecco, Loris et al. (2015) Interleukin 21 Controls mRNA and MicroRNA Expression in CD40-Activated Chronic Lymphocytic Leukemia Cells.; PLoS One, 10: e0134706 |
|
GSE42158 |
| De Cegli, Rossella et al. (2010) A mouse embryonic stem cell bank for inducible overexpression of human chromosome 21 genes.; Genome Biol, 11: R64 |
|
GSE19836.2.6 GSE19836.2.5 GSE19836.2.8 GSE19836.2.7 GSE19836.2.2 GSE19836.2.1 GSE19836.2.4 GSE19836.2.3 GSE19836.2.11 GSE19836.2.9 GSE19836.2.10 GSE19836.2.15 GSE19836.2.14 GSE19836.2.13 GSE19836.2.12 GSE19836.2.19 GSE19836.2.18 GSE19836.2.17 GSE19836.2.16 GSE19836.1 |
| De Cegli, Rossella et al. (2013) Reverse engineering a mouse embryonic stem cell-specific transcriptional network reveals a new modulator of neuronal differentiation.; Nucleic Acids Res, 41: 711-26 |
|
GSE32015 |
| de Conti, Aline et al. (2020) Butyrate-containing structured lipids inhibit RAC1 and epithelial-to-mesenchymal transition markers: a chemopreventive mechanism against hepatocarcinogenesis.; J Nutr Biochem, 86: 108496 |
|
GSE109685 |
| De Coster, Sam et al. (2013) Gender-specific transcriptomic response to environmental exposure in Flemish adults.; Environ Mol Mutagen, 54: 574-88 |
|
GSE44422 |