List of all 22,542 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Chow, Siu Yu A et al. (2022) Human sensory neurons modulate melanocytes through secretion of RGMB.; Cell Rep, 40: 111366 |
|
GSE189493 |
| Chowdary, Dondapati et al. (2006) Prognostic gene expression signatures can be measured in tissues collected in RNAlater preservative.; J Mol Diagn, 8: 31-9 |
|
GSE3726 |
| Chowdhury, Arpita et al. (2023) Metabolic switch from fatty acid oxidation to glycolysis in knock-in mouse model of Barth syndrome.; EMBO Mol Med, 15: e17399 |
|
GSE221662 GSE221663 |
| Chowdhury, Fatema Z et al. (2011) IL-12 selectively programs effector pathways that are stably expressed in human CD8+ effector memory T cells in vivo.; Blood, 118: 3890-900 |
|
GSE27337 |
| Chowdhury, Rebecca et al. (2018) The Trim family of genes and the retina: Expression and functional characterization.; PLoS One, 13: e0202867 |
|
GSE114323 |
| Choy, David F et al. (2011) Gene expression patterns of Th2 inflammation and intercellular communication in asthmatic airways.; J Immunol, 186: 1861-9 |
|
GSE23611 |
| Choy, Edwin et al. (2008) Genetic analysis of human traits in vitro: drug response and gene expression in lymphoblastoid cell lines.; PLoS Genet, 4: e1000287 |
|
GSE11582 |
| Choy, Meng Shyan et al. (2011) Up-regulation of endoplasmic reticulum stress-related genes during the early phase of treatment of cultured cortical neurons by the proteasomal inhibitor lactacystin.; J Cell Physiol, 226: 494-510 |
|
GSE23155 GSE22465 |
| Christ, Anette et al. (2022) Low Density Lipoprotein Exposure of Plasmacytoid Dendritic Cells Blunts Toll-like Receptor 7/9 Signaling via NUR77.; Biomedicines, 10: [no pages] |
|
GSE133902 |
| Christensen, Jon et al. (2012) Defining new criteria for selection of cell-based intestinal models using publicly available databases.; BMC Genomics, 13: 274 |
|
GSE30292 |
| Christensen, Lanette M et al. (2024) T-regulatory cells require Sin3a for stable expression of Foxp3.; Front Immunol, 15: 1444937 |
|
GSE263830 |
| Christian, Sherri L et al. (2012) Suppression of IFN-induced transcription underlies IFN defects generated by activated Ras/MEK in human cancer cells.; PLoS One, 7: e44267 |
|
GSE31019 |
| Christie, Darah A et al. (2015) PU.1 opposes IL-7-dependent proliferation of developing B cells with involvement of the direct target gene bruton tyrosine kinase.; J Immunol, 194: 595-605 |
|
GSE48891 |
| Christodoulou, Constantina et al. (2011) Mouse ES and iPS cells can form similar definitive endoderm despite differences in imprinted genes.; J Clin Invest, 121: 2313-25 |
|
GSE27087 |
| Christoforou, Nicolas et al. (2008) Mouse ES cell-derived cardiac precursor cells are multipotent and facilitate identification of novel cardiac genes.; J Clin Invest, 118: 894-903 |
|
GSE5671 |
| Christoforou, Nicolas et al. (2013) Transcription factors MYOCD, SRF, Mesp1 and SMARCD3 enhance the cardio-inducing effect of GATA4, TBX5, and MEF2C during direct cellular reprogramming.; PLoS One, 8: e63577 |
|
GSE44401 |
| Christoforou, Nicolas et al. (2017) Core Transcription Factors, MicroRNAs, and Small Molecules Drive Transdifferentiation of Human Fibroblasts Towards The Cardiac Cell Lineage.; Sci Rep, 7: 40285 |
|
GSE81723 |
| Christofyllakis, Konstantinos et al. (2023) Vitamin D Enhances Immune Effector Pathways of NK Cells Thus Providing a Mechanistic Explanation for the Increased Effectiveness of Therapeutic Monoclonal Antibodies.; Nutrients, 15: [no pages] |
|
GSE239308 |
| Christopoulos, Petros et al. (2011) Definition and characterization of the systemic T-cell dysregulation in untreated indolent B-cell lymphoma and very early CLL.; Blood, 117: 3836-46 |
|
GSE23293 |
| Christy, Alison L et al. (2013) Mast cell activation and neutrophil recruitment promotes early and robust inflammation in the meninges in EAE.; J Autoimmun, 42: 50-61 |
|
GSE37191 |
| Chrzanowski, Uta et al. (2019) Oligodendrocyte degeneration and concomitant microglia activation directs peripheral immune cells into the forebrain.; Neurochem Int, 126: 139-153 |
|
GSE119672 |
| Chu, Li-Fang et al. (2011) Blimp1 expression predicts embryonic stem cell development in vitro.; Curr Biol, 21: 1759-65 |
|
GSE31868 |
| Chu, Pei-Lun et al. (2013) A novel genetic locus modulates infarct volume independently of the extent of collateral circulation.; Physiol Genomics, 45: 751-63 |
|
GSE46443 |
| Chu, S Haihua et al. (2020) Loss of H3K36 Methyltransferase SETD2 Impairs V(D)J Recombination during Lymphoid Development.; iScience, 23: 100941 |
|
GSE131588 |
| Chu, Yajing et al. (2014) Liver Med23 ablation improves glucose and lipid metabolism through modulating FOXO1 activity.; Cell Res, 24: 1250-65 |
|
GSE48966 |
| Chu, Yuan et al. (2023) Lysine 117 Residue Is Essential for the Function of the Hepatocyte Nuclear Factor 1α.; Diabetes, 72: 1502-1516 |
|
GSE207758 |
| Chua, Mei-Sze et al. (2003) Molecular profiling of anemia in acute renal allograft rejection using DNA microarrays.; Am J Transplant, 3: 17-22 |
|
GSE3976 |
| Chuang, Ching-Yu et al. (2019) Modeling spinocerebellar ataxias 2 and 3 with iPSCs reveals a role for glutamate in disease pathology.; Sci Rep, 9: 1166 |
|
GSE96826 |
| Chuang, Han-Yu et al. (2012) Subnetwork-based analysis of chronic lymphocytic leukemia identifies pathways that associate with disease progression.; Blood, 120: 2639-49 |
|
GSE39671 |
| Chuang, Jen-Hua et al. (2018) Expression profiling of cell-intrinsic regulators in the process of differentiation of human iPSCs into retinal lineages.; Stem Cell Res Ther, 9: 140 |
|
GSE96853 |
| Chucair-Elliott, Ana J et al. (2019) Tamoxifen induction of Cre recombinase does not cause long-lasting or sexually divergent responses in the CNS epigenome or transcriptome: implications for the design of aging studies.; Geroscience, 41: 691-708 |
|
GSE135752 |
| Chucair-Elliott, Ana J et al. (2020) Inducible cell-specific mouse models for paired epigenetic and transcriptomic studies of microglia and astroglia.; Commun Biol, 3: 693 |
|
GSE159106 GSE140895 GSE140974 |
| Chucair-Elliott, Ana J et al. (2022) Translatomic response of retinal Müller glia to acute and chronic stress.; Neurobiol Dis, 175: 105931 |
|
GSE197507 GSE197481 GSE197503 GSE197500 |
| Chucair-Elliott, Ana J et al. (2024) Age- and sex- divergent translatomic responses of the mouse retinal pigmented epithelium.; Neurobiol Aging, 140: 41-59 |
|
GSE245595 |
| Chucair-Elliott, Ana J et al. (2024) Comparative analysis of In vivo endothelial cell translatomes across central nervous system vascular beds.; Exp Eye Res, 248: 110101 |
|
GSE270198 GSE270200 GSE270197 |
| Chudnovsky, Yakov et al. (2014) ZFHX4 interacts with the NuRD core member CHD4 and regulates the glioblastoma tumor-initiating cell state.; Cell Rep, 6: 313-24 |
|
GSE52363 |
| Chudzinski-Tavassi, Ana Marisa et al. (2010) A new tick Kunitz type inhibitor, Amblyomin-X, induces tumor cell death by modulating genes related to the cell cycle and targeting the ubiquitin-proteasome system.; Toxicon, 56: 1145-54 |
|
GSE18124 |
| Chui, Angela et al. (2020) Oxidative stress regulates progenitor behavior and cortical neurogenesis.; Development, 147: [no pages] |
|
GSE142684 |
| Chuikov, Sergei et al. (2010) Prdm16 promotes stem cell maintenance in multiple tissues, partly by regulating oxidative stress.; Nat Cell Biol, 12: 999-1006 |
|
GSE23406 |
| Chunduri, Narendra Kumar et al. (2021) Systems approaches identify the consequences of monosomy in somatic human cells.; Nat Commun, 12: 5576 |
|
GSE150686.1 GSE150686.2 |
| Chung, Alicia S et al. (2013) An interleukin-17-mediated paracrine network promotes tumor resistance to anti-angiogenic therapy.; Nat Med, 19: 1114-23 |
|
GSE48329 |
| Chung, Changuk et al. (2019) Early Correction of N-Methyl-D-Aspartate Receptor Function Improves Autistic-like Social Behaviors in Adult Shank2-/-Mice.; Biol Psychiatry, 85: 534-543 |
|
GSE82066 |
| Chung, Changuk et al. (2023) Comprehensive multi-omic profiling of somatic mutations in malformations of cortical development.; Nat Genet, 55: 209-220 |
|
GSE218022 |
| Chung, Chih-Yao et al. (2021) Constitutive activation of the PI3K-Akt-mTORC1 pathway sustains the m.3243 A > G mtDNA mutation.; Nat Commun, 12: 6409 |
|
GSE175477 |
| Chung, Christine H et al. (2006) Gene expression profiles identify epithelial-to-mesenchymal transition and activation of nuclear factor-kappaB signaling as characteristics of a high-risk head and neck squamous cell carcinoma.; Cancer Res, 66: 8210-8 |
|
GSE2837 |
| Chung, Daesuk et al. (2015) Estrogen mediated epithelial proliferation in the uterus is directed by stromal Fgf10 and Bmp8a.; Mol Cell Endocrinol, 400: 48-60 |
|
GSE52399 |
| Chung, Ha-Yeun et al. (2023) Microglia mediate neurocognitive deficits by eliminating C1q-tagged synapses in sepsis-associated encephalopathy.; Sci Adv, 9: eabq7806 |
|
GSE198862 GSE198861 |
| Chung, Henry C Y et al. (2012) Human induced pluripotent stem cells derived under feeder-free conditions display unique cell cycle and DNA replication gene profiles.; Stem Cells Dev, [no vol.]: [no pages] |
|
GSE21655 |
| Chung, Hye Yoon et al. (2024) Morc2a variants cause hydroxyl radical-mediated neuropathy and are rescued by restoring GHKL ATPase.; Brain, [no vol.]: [no pages] |
|
GSE235918 |
| Chung, Jaehoon et al. (2010) Timing-dependent actions of NGF required for cell differentiation.; PLoS One, 5: e9011 |
|
GSE18016 |
| Chung, Katherine Minjee et al. (2020) Endocrine-Exocrine Signaling Drives Obesity-Associated Pancreatic Ductal Adenocarcinoma.; Cell, 181: 832-847.e18 |
|
GSE131714 |
| Chung, Lorinda et al. (2009) Molecular framework for response to imatinib mesylate in systemic sclerosis.; Arthritis Rheum, 60: 584-91 |
|
GSE11130 |
| Chung, Man-Hon et al. (2023) RRM2 as a novel prognostic and therapeutic target of NF1-associated MPNST.; Cell Oncol (Dordr), 46: 1399-1413 |
|
GSE213988 |
| Chung, Sooyoung et al. (2014) Impact of circadian nuclear receptor REV-ERB? on midbrain dopamine production and mood regulation.; Cell, 157: 858-68 |
|
GSE55119 |
| Chung, Sooyoung et al. (2016) The role of inositol 1,4,5-trisphosphate 3-kinase A in regulating emotional behavior and amygdala function.; Sci Rep, 6: 23757 |
|
GSE77001 |
| Chung, T Philip et al. (2006) Molecular diagnostics in sepsis: from bedside to bench.; J Am Coll Surg, 203: 585-598 |
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GSE5663.2 GSE5663.1 |
| Chung, Tracy D et al. (2022) Effects of acute and chronic oxidative stress on the blood-brain barrier in 2D and 3D in vitro models.; Fluids Barriers CNS, 19: 33 |
|
GSE193887 |
| Chung, Tracy D et al. (2026) Mutations associated with Alzheimer's disease and aged serum synergistically elicit blood-brain barrier dysfunction in a tissue-engineered model.; Fluids Barriers CNS, 23: [no pages] |
|
GSE272179 |
| Church, Rachel J et al. (2014) A Systems Biology Approach Utilizing a Mouse Diversity Panel Identifies Genetic Differences Influencing Isoniazid-Induced Microvesicular Steatosis.; Toxicol Sci, [no vol.]: [no pages] |
|
GSE55489 |
| Churchman, Michelle L et al. (2015) Efficacy of Retinoids in IKZF1-Mutated BCR-ABL1 Acute Lymphoblastic Leukemia.; Cancer Cell, 28: 343-56 |
|
GSE68391 |
| Chuvakova, Lyubov N et al. (2021) Transcriptome of the Krushinsky-Molodkina Audiogenic Rat Strain and Identification of Possible Audiogenic Epilepsy-Associated Genes.; Front Mol Neurosci, 14: 738930 |
|
GSE173885 |
| Ci, Xinpei et al. (2018) Heterochromatin Protein 1? Mediates Development and Aggressiveness of Neuroendocrine Prostate Cancer.; Cancer Res, 78: 2691-2704 |
|
GSE105033 |
| Cibi, Dasan Mary et al. (2019) Neural crest-specific deletion ofRbfox2in mice leads to craniofacial abnormalities including cleft palate.; Elife, 8: [no pages] |
|
GSE127245 |
| Ciceri, Gabriele et al. (2024) An epigenetic barrier sets the timing of human neuronal maturation.; Nature, 626: 881-890 |
|
GSE196073 |
| Cicha, Emilia et al. (2026) The Effects of ACTH and Dexamethasone on the Transcriptomic Profile of the Rat Adrenal Gland: An In Vivo Study.; Curr Issues Mol Biol, 48: [no pages] |
|
GSE317604 |
| Cid, Elena et al. (2021) Sublayer- and cell-type-specific neurodegenerative transcriptional trajectories in hippocampal sclerosis.; Cell Rep, 35: 109229 |
|
GSE143555 |
| Ciencewicki, Jonathan M et al. (2016) Effects of mannose-binding lectin on pulmonary gene expression and innate immune inflammatory response to ozone.; Am J Physiol Lung Cell Mol Physiol, 311: L280-91 |
|
GSE68522 |
| Cilloniz, Cristian et al. (2012) Molecular signatures associated with Mx1-mediated resistance to highly pathogenic influenza virus infection: mechanisms of survival.; J Virol, 86: 2437-46 |
|
GSE35933 |
| Cimino, Daniela et al. (2008) Identification of new genes associated with breast cancer progression by gene expression analysis of predefined sets of neoplastic tissues.; Int J Cancer, 123: 1327-38 |
|
GSE9662 |
| Cimino, Irene et al. (2021) Murine neuronatin deficiency is associated with a hypervariable food intake and bimodal obesity.; Sci Rep, 11: 17571 |
|
GSE171155 |
| Cincotta, Steven A et al. (2023) Differential susceptibility of male and female germ cells to glucocorticoid-mediated signaling.; bioRxiv, [no vol.]: [no pages] |
|
GSE234663 GSE234674 GSE234672 |
| Cinkornpumin, Jessica K et al. (2024) Hypoxia and loss ofGCM1expression prevents differentiation and contact inhibition in human trophoblast stem cells.; bioRxiv, [no vol.]: [no pages] |
|
GSE276594 GSE276595 |
| Cioni, Bianca et al. (2023) JMJD6 Shapes a Pro-tumor Microenvironment via ANXA1-Dependent Macrophage Polarization in Breast Cancer.; Mol Cancer Res, 21: 614-627 |
|
GSE216235 GSE216234 |
| Cipolla, Rocco et al. (2025) PROCA11 early activation fuels prostate cancer neuroendocrine traits by regulating cell survival and migration.; iScience, 28: 113931 |
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GSE267185.1 GSE267185.2 |
| Cipolletta, Daniela et al. (2012) PPAR-? is a major driver of the accumulation and phenotype of adipose tissue Treg cells.; Nature, 486: 549-53 |
|
GSE37532 |
| Cipriani, Silvia et al. (2024) Niacin ameliorates Charcot-Marie-Tooth 4B1 neuropathy without interfering with nerve regeneration.; Brain Commun, 7: fcaf039 |
|
GSE233289 |
| Cirilo, Priscila Daniele Ramos et al. (2013) An integrative genomic and transcriptomic analysis reveals potential targets associated with cell proliferation in uterine leiomyomas.; PLoS One, 8: e57901 |
|
GSE42939 |
| Cirnaru, Maria-Daniela et al. (2021) Striatal Cholinergic Dysregulation after Neonatal Decrease in X-Linked Dystonia Parkinsonism-Related TAF1 Isoforms.; Mov Disord, 36: 2780-2794 |
|
GSE178224.2 GSE178224.1 |
| Cirnaru, Maria-Daniela et al. (2021) Unbiased identification of novel transcription factors in striatal compartmentation and striosome maturation.; Elife, 10: [no pages] |
|
GSE143276 |
| Cirrincione, Anthony M et al. (2022) Longitudinal RNA Sequencing of Skin and DRG Neurons in Mice with Paclitaxel-Induced Peripheral Neuropathy.; Data (Basel), 7: [no pages] |
|
GSE185084 |
| Citrin, Deborah E et al. (2013) Role of Type II Pneumocyte Senescence in Radiation-Induced Lung Fibrosis.; J Natl Cancer Inst, 105: 1474-84 |
|
GSE41789 |
| Ciudad-Roberts, Andrés et al. (2015) Alcohol enhances the psychostimulant and conditioning effects of mephedrone in adolescent mice; postulation of unique roles of D3 receptors and BDNF in place preference acquisition.; Br J Pharmacol, 172: 4970-84 |
|
GSE58279 |