List of all 16,789 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Dressman, Holly K et al. (2006) Gene expression profiles of multiple breast cancer phenotypes and response to neoadjuvant chemotherapy.; Clin Cancer Res, 12: 819-26 |
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GSE52322 |
| Drewniak, Agata et al. (2009) Changes in gene expression of granulocytes during in vivo granulocyte colony-stimulating factor/dexamethasone mobilization for transfusion purposes.; Blood, 113: 5979-98 |
|
GSE12841 |
| Drews, Katharina et al. (2012) The cytotoxic and immunogenic hurdles associated with non-viral mRNA-mediated reprogramming of human fibroblasts.; Biomaterials, 33: 4059-68 |
|
GSE34943 |
| Driessen, Terri M et al. [Unknown date]Molecular pathway analysis towards understanding tissue vulnerability in spinocerebellar ataxia type 1.; Elife, 7: [no pages] |
|
GSE122099 |
| Driessens, Natacha et al. (2009) Hydrogen peroxide induces DNA single- and double-strand breaks in thyroid cells and is therefore a potential mutagen for this organ.; Endocr Relat Cancer, 16: 845-56 |
|
GSE39156 |
| Driscoll, James J et al. (2010) The sumoylation pathway is dysregulated in multiple myeloma and is associated with adverse patient outcome.; Blood, 115: 2827-34 |
|
GSE5900 |
| Drissen, Roy et al. (2016) Distinct myeloid progenitor-differentiation pathways identified through single-cell RNA sequencing.; Nat Immunol, 17: 666-76 |
|
GSE49241 |
| Drobysheva, Daria et al. (2015) Transformation of enriched mammary cell populations with polyomavirus middle T antigen influences tumor subtype and metastatic potential.; Breast Cancer Res, 17: 132 |
|
GSE64453 |
| Dror, Erez et al. (2023) Epigenetic dosage identifies two major and functionally distinct β cell subtypes.; Cell Metab, 35: 821-836.e7 |
|
GSE224059 |
| Drosatos, Konstantinos et al. (2007) A dominant negative form of the transcription factor c-Jun affects genes that have opposing effects on lipid homeostasis in mice.; J Biol Chem, [no vol.]: [no pages] |
|
GSE6850 |
| Drouin-Ouellet, Janelle et al. (2022) Age-related pathological impairments in directly reprogrammed dopaminergic neurons derived from patients with idiopathic Parkinson's disease.; Stem Cell Reports, 17: 2203-2219 |
|
GSE125239 |
| Drouin-Ouellet, Janelle et al. [Unknown date]REST suppression mediates neural conversion of adult human fibroblasts via microRNA-dependent and -independent pathways.; EMBO Mol Med, 9: 1117-1131 |
|
GSE90068 |
| Drumm, Michael R et al. (2023) Postoperative risk of IDH-mutant glioma-associated seizures and their potential management with IDH-mutant inhibitors.; J Clin Invest, 133: [no pages] |
|
GSE227995 |
| Du, Heng et al. (2022) Transcription factors Bcl11a and Bcl11b are required for the production and differentiation of cortical projection neurons.; Cereb Cortex, 32: 3611-3632 |
|
GSE182990 |
| Du, Jiahui et al. (2023) BRD9-mediated chromatin remodeling suppresses osteoclastogenesis through negative feedback mechanism.; Nat Commun, 14: 1413 |
|
GSE222239 |
| Du, Kunzhao et al. (2021) Distinct roles of Fto and Mettl3 in controlling development of the cerebral cortex through transcriptional and translational regulations.; Cell Death Dis, 12: 700 |
|
GSE154992 |
| Du, Ngoc-Hien et al. (2014) MicroRNAs shape circadian hepatic gene expression on a transcriptome-wide scale.; Elife, 3: e02510 |
|
GSE57313 |
| Du, Qiumei et al. (2019) MIR205HG Is a Long Noncoding RNA that Regulates Growth Hormone and Prolactin Production in the Anterior Pituitary.; Dev Cell, 49: 618-631.e5 |
|
GSE126943 |
| Du, Shibin et al. (2022) A nerve injury-specific long noncoding RNA promotes neuropathic pain by increasing Ccl2 expression.; J Clin Invest, 132: [no pages] |
|
GSE206043 |
| Du, Wei et al. (2016) Age-associated vascular inflammation promotes monocytosis during atherogenesis.; Aging Cell, 15: 766-77 |
|
GSE69187 |
| Du, Wen et al. (2022) Pharmacological conversion of gut epithelial cells into insulin-producing cells lowers glycemia in diabetic animals.; J Clin Invest, 132: [no pages] |
|
GSE201832 GSE213445 |
| Du, Xiangnan et al. (2012) FGFR3 stimulates stearoyl CoA desaturase 1 activity to promote bladder tumor growth.; Cancer Res, 72: 5843-55 |
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GSE41035 |
| Du, Xiaofei et al. [Unknown date]?1ACT Is Essential for Survival and Early Cerebellar Programming in a Critical Neonatal Window.; Neuron, 102: 770-785.e7 |
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GSE126089 |
| Du, Xinli et al. (2006) Genomic profiles for human peripheral blood T cells, B cells, natural killer cells, monocytes, and polymorphonuclear cells: comparisons to ischemic stroke, migraine, and Tourette syndrome.; Genomics, 87: 693-703 |
|
GSE72642 |
| Du, Yingshi et al. (2023) NQO1 regulates expression and alternative splicing of apoptotic genes associated with Alzheimer's disease in PC12 cells.; Brain Behav, 13: e2917 |
|
GSE185633 |
| Du, Zhanhui et al. (2020) Identification of Differentially Expressed Genes and Key Pathways in the Dorsal Root Ganglion After Chronic Compression.; Front Mol Neurosci, 13: 71 |
|
GSE145222 |
| Duan, Chao et al. (2024) Stanniocalcin-1 promotes temozolomide resistance of glioblastoma through regulation of MGMT.; Sci Rep, 14: 20199 |
|
GSE261684 |
| Duan, Chunwen et al. (2024) Retinal organoids with X-linked retinoschisis RS1 (E72K) mutation exhibit a photoreceptor developmental delay and are rescued by gene augmentation therapy.; Stem Cell Res Ther, 15: 152 |
|
GSE267405 |
| Duan, Hongmei et al. (2015) Transcriptome analyses reveal molecular mechanisms underlying functional recovery after spinal cord injury.; Proc Natl Acad Sci U S A, 112: 13360-5 |
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GSE69334 |
| Duan, Jubao et al. (2013) Genome-wide survey of interindividual differences of RNA stability in human lymphoblastoid cell lines.; Sci Rep, 3: 1318 |
|
GSE34204 |
| Duan, Qiming et al. (2017) BET bromodomain inhibition suppresses innate inflammatory and profibrotic transcriptional networks in heart failure.; Sci Transl Med, 9: [no pages] |
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GSE96561 GSE96560 |
| Duan, Shunlei et al. (2015) PTEN deficiency reprogrammes human neural stem cells towards a glioblastoma stem cell-like phenotype.; Nat Commun, 6: 10068 |
|
GSE61794 |
| Duan, Wenzhe et al. (2023) Warburg effect enhanced by AKR1B10 promotes acquired resistance to pemetrexed in lung cancer-derived brain metastasis.; J Transl Med, 21: 547 |
|
GSE211215 |
| Duarte, Rodrigo R R et al. (2019) The Psychiatric Risk Gene NT5C2 Regulates Adenosine Monophosphate-Activated Protein Kinase Signaling and Protein Translation in Human Neural Progenitor Cells.; Biol Psychiatry, 86: 120-130 |
|
GSE109240 |
| Dubey, Richa et al. (2011) Small interfering RNA against transcription factor STAT6 leads to increased cholesterol synthesis in lung cancer cell lines.; PLoS One, 6: e28509 |
|
GSE25942 |
| Dubois, M et al. (1974) Proceedings: Comparative study of recovery from short anaesthesia with thiopentone or althesin, apparatus used and results.; Br J Anaesth, 46: 320 |
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GSE56396 |
| Dubois, Patrick C A et al. (2010) Multiple common variants for celiac disease influencing immune gene expression.; Nat Genet, 42: 295-302 |
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GSE20332 GSE20142 |
| Dubois-Pot-Schneider, Hélène et al. (2014) Inflammatory cytokines promote the retrodifferentiation of tumor-derived hepatocyte-like cells to progenitor cells.; Hepatology, 60: 2077-90 |
|
GSE52989 |
| Dubois-Pot-Schneider, Hélène et al. (2022) Transcriptional and Epigenetic Consequences of DMSO Treatment on HepaRG Cells.; Cells, 11: [no pages] |
|
GSE112123 |
| Dubos, Aline et al. (2018) A new mouse model of ARX dup24 recapitulates the patients' behavioral and fine motor alterations.; Hum Mol Genet, 27: 2138-2153 |
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GSE90036 |
| Ducassou, Stéphane et al. (2017) MYB-GATA1 fusion promotes basophilic leukaemia: involvement of interleukin-33 and nerve growth factor receptors.; J Pathol, 242: 347-357 |
|
GSE72913 |
| Ducheix, Simon et al. (2013) A systems biology approach to the hepatic role of the oxysterol receptor LXR in the regulation of lipogenesis highlights a cross-talk with PPAR?.; Biochimie, [no vol.]: [no pages] |
|
GSE38083 |
| Duchnowska, Renata et al. (2015) Predicting early brain metastases based on clinicopathological factors and gene expression analysis in advanced HER2-positive breast cancer patients.; J Neurooncol, 122: 205-16 |
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GSE38057 |
| Duchnowska, Renata et al. (2017) Brain Metastasis Prediction by Transcriptomic Profiling in Triple-Negative Breast Cancer.; Clin Breast Cancer, 17: e65-e75 |
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GSE76714 |
| Duchon, Arnaud et al. (2021) Multi-influential genetic interactions alter behaviour and cognition through six main biological cascades in Down syndrome mouse models.; Hum Mol Genet, 30: 771-788 |
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GSE149459 GSE149465 GSE149464 GSE149463 GSE149462 GSE149461 GSE149460 |
| Duchon, Arnaud et al. (2022) Ts66Yah, a mouse model of Down syndrome with improved construct and face validity.; Dis Model Mech, 15: [no pages] |
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GSE213502 GSE213500 |
| Duclot, Florian et al. (2015) The estrous cycle surpasses sex differences in regulating the transcriptome in the rat medial prefrontal cortex and reveals an underlying role of early growth response 1.; Genome Biol, 16: 256 |
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GSE69765 |
| Ducreux, Julie et al. (2014) Global molecular effects of tocilizumab therapy in rheumatoid arthritis synovium.; Arthritis Rheumatol, 66: 15-23 |
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GSE45867 |
| Ducreux, Julie et al. (2016) Interferon α kinoid induces neutralizing anti-interferon α antibodies that decrease the expression of interferon-induced and B cell activation associated transcripts: analysis of extended follow-up data from the interferon α kinoid phase I/II study.; Rheumatology (Oxford), 55: 1901-5 |
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GSE72747 |
| Duda, Katarzyna J et al. (2021) m6A RNA methylation of major satellite repeat transcripts facilitates chromatin association and RNA:DNA hybrid formation in mouse heterochromatin.; Nucleic Acids Res, 49: 5568-5587 |
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GSE156481 |
| Dudley, Kevin J et al. (2008) Genome-wide analysis in a murine Dnmt1 knockdown model identifies epigenetically silenced genes in primary human pituitary tumors.; Mol Cancer Res, 6: 1567-74 |
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GSE10552 |
| Dudziak, Diana et al. (2007) Differential antigen processing by dendritic cell subsets in vivo.; Science, 315: 107-11 |
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GSE6259 |
| Duffy, Erin E et al. (2022) Developmental dynamics of RNA translation in the human brain.; Nat Neurosci, 25: 1353-1365 |
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GSE180240 |
| Dufour, Annika et al. (2010) Acute myeloid leukemia with biallelic CEBPA gene mutations and normal karyotype represents a distinct genetic entity associated with a favorable clinical outcome.; J Clin Oncol, 28: 570-7 |
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GSE15210 |
| Dufour, Damien et al. (2022) Loss of SUMO-specific protease 2 causes isolated glucocorticoid deficiency by blocking adrenal cortex zonal transdifferentiation in mice.; Nat Commun, 13: 7858 |
|
GSE193480 |
| Dugaucquier, Lindsey et al. (2020) The role of endothelial autocrine NRG1/ERBB4 signaling in cardiac remodeling.; Am J Physiol Heart Circ Physiol, 319: H443-H455 |
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GSE150619 |
| Duggan, Jeffrey M et al. (2011) Synergistic interactions of TLR2/6 and TLR9 induce a high level of resistance to lung infection in mice.; J Immunol, 186: 5916-26 |
|
GSE26864 |
| Duggan, Michael R et al. [Unknown date]Transcriptomic changes in the prefrontal cortex of rats as a function of age and cognitive engagement.; Neurobiol Learn Mem, 163: 107035 |
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GSE105453 |
| Duggan, Shane P et al. (2010) An integrative genomic approach in oesophageal cells identifies TRB3 as a bile acid responsive gene, downregulated in Barrett's oesophagus, which regulates NF-kappaB activation and cytokine levels.; Carcinogenesis, 31: 936-45 |
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GSE13400 |
| Duijkers, Floor A M et al. (2013) Epigenetic drug combination induces genome-wide demethylation and altered gene expression in neuro-ectodermal tumor-derived cell lines.; Cell Oncol (Dordr), 36: 351-62 |
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GSE35218 |
| Duivenvoorde, Loes P M et al. (2011) Dietary restriction of mice on a high-fat diet induces substrate efficiency and improves metabolic health.; J Mol Endocrinol, 47: 81-97 |
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GSE27213 |
| Duke, Corey G et al. (2017) Experience-dependent epigenomic reorganization in the hippocampus.; Learn Mem, 24: 278-288 |
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GSE95449 |
| Dulek, Daniel E et al. (2014) Allergic airway inflammation decreases lung bacterial burden following acute Klebsiella pneumoniae infection in a neutrophil- and CCL8-dependent manner.; Infect Immun, 82: 3723-39 |
|
GSE57602 |
| Dulloo, Iqbal et al. (2024) Cleavage of the pseudoprotease iRhom2 by the signal peptidase complex reveals an ER-to-nucleus signaling pathway.; Mol Cell, 84: 277-292.e9 |
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GSE219008 |
| Dumas, Eric K et al. (2011) Anthrax lethal toxin-induced gene expression changes in mouse lung.; Toxins (Basel), 3: 1111-30 |
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GSE28554 |
| Dumeaux, Vanessa et al. (2006) Gene expression profiling of whole-blood samples from women exposed to hormone replacement therapy.; Mol Cancer Ther, 5: 868-76 |
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GSE3492 |
| Dumitriu, Alexandra et al. (2016) Integrative analyses of proteomics and RNA transcriptomics implicate mitochondrial processes, protein folding pathways and GWAS loci in Parkinson disease.; BMC Med Genomics, 9: 5 |
|
GSE68719 |
| Dumur, Catherine I et al. (2010) Differential gene expression profiling of cultured neu-transformed versus spontaneously-transformed rat cholangiocytes and of corresponding cholangiocarcinomas.; Exp Mol Pathol, 89: 227-35 |
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GSE38834 |
| Duncan, Alexander et al. (2019) Habenular TCF7L2 links nicotine addiction to diabetes.; Nature, 574: 372-377 |
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GSE137118 |
| Duncan, F Jason et al. (2015) Broad functional correction of molecular impairments by systemic delivery of scAAVrh74-hSGSH gene delivery in MPS IIIA mice.; Mol Ther, 23: 638-47 |
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GSE97759 |
| Duncan, Francesca E et al. (2009) The effect of blastomere biopsy on preimplantation mouse embryo development and global gene expression.; Fertil Steril, 91: 1462-5 |
|
GSE11206 |
| Duncan, Peter I et al. (2009) Sialic acid utilisation and synthesis in the neonatal rat revisited.; PLoS One, 4: e8241 |
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GSE18133 |
| Dunckley, Travis et al. (2006) Gene expression correlates of neurofibrillary tangles in Alzheimer's disease.; Neurobiol Aging, 27: 1359-71 |
|
GSE4757 |
| Dunn, Amelia D et al. (2023) Molecular and long-term behavioral consequences of neonatal opioid exposure and withdrawal in mice.; Front Behav Neurosci, 17: 1202099 |
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GSE225468 |
| Dunn, Amy R et al. (2020) Identifying Mechanisms of Normal Cognitive Aging Using a Novel Mouse Genetic Reference Panel.; Front Cell Dev Biol, 8: 562662 |
|
GSE119408 |
| Dunn, Carissa J et al. (2017) Histone Hypervariants H2A.Z.1 and H2A.Z.2 Play Independent and Context-Specific Roles in Neuronal Activity-Induced Transcription ofArc/Arg3.1and Other Immediate Early Genes.; eNeuro, 4: [no pages] |
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GSE96886 |
| Dunn, Emily N et al. (2018) Evaluating mice lacking serum carboxylesterase as a behavioral model for nerve agent intoxication.; Toxicol Mech Methods, 28: 563-572 |
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GSE114024 |
| Dunn, L L et al. (2006) The function of melanotransferrin: a role in melanoma cell proliferation and tumorigenesis.; Carcinogenesis, 27: 2157-69 |
|
GSE4523 |
| Dunnick, June K et al. (2012) Characterization of polybrominated diphenyl ether toxicity in Wistar Han rats and use of liver microarray data for predicting disease susceptibilities.; Toxicol Pathol, 40: 93-106 |
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GSE32156 |
| Duns, Gerben et al. (2010) Histone methyltransferase gene SETD2 is a novel tumor suppressor gene in clear cell renal cell carcinoma.; Cancer Res, 70: 4287-91 |
|
GSE20491 |
| Dunville, Keagan et al. (2022) Laminin 511 and WNT signalling sustain prolonged expansion of hiPSC-derived hippocampal progenitors.; Development, 149: [no pages] |
|
GSE199355 |
| Duong, Austin T H et al. (2019) The Clock Mechanism Influences Neurobiology and Adaptations to Heart Failure in Clock?19/?19Mice With Implications for Circadian Medicine.; Sci Rep, 9: 4994 |
|
GSE124670 |
| Duong, Phu et al. (2021) H3K27 demethylases are dispensable for activation of Polycomb-regulated injury response genes in peripheral nerve.; J Biol Chem, 297: 100852 |
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GSE178872.2 GSE178872.1 |
| Duplaquet, Leslie et al. (2024) Mammalian SWI/SNF complex activity regulates POU2F3 and constitutes a targetable dependency in small cell lung cancer.; Cancer Cell, 42: 1352-1369.e13 |
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GSE249258 GSE249362 |
| Dupré, Nicolas et al. (2024) Protein aggregates containing wild-type and mutant NOTCH3 are major drivers of arterial pathology in CADASIL.; J Clin Invest, 134: [no pages] |
|
GSE242794 |
| Dupuy, Maryne et al. (2024) Transcriptional regulation of KCNA2 coding Kv1.2 by EWS::FLI1: involvement in controlling the YAP/Hippo signalling pathway and cell proliferation.; Cell Commun Signal, 22: 602 |
|
GSE246854 |
| Duque-Afonso, Jesús et al. (2016) E2A-PBX1 Remodels Oncogenic Signaling Networks in B-cell Precursor Acute Lymphoid Leukemia.; Cancer Res, 76: 6937-6949 |
|
GSE81010 |
| Durak, Omer et al. [Unknown date]Chd8 mediates cortical neurogenesis via transcriptional regulation of cell cycle and Wnt signaling.; Nat Neurosci, 19: 1477-1488 |
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GSE72442 |