List of all 22,542 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Ebrahimi, Aref et al. (2017) Evidence of stress in β cells obtained with laser capture microdissection from pancreases of brain dead donors.; Islets, 9: 19-29 |
|
GSE89120 |
| Echave, Pedro et al. (2009) Extracellular growth factors and mitogens cooperate to drive mitochondrial biogenesis.; J Cell Sci, 122: 4516-25 |
|
GSE10775 |
| Echevarría-Vargas, Ileabett M et al. (2018) Co-targeting BET and MEK as salvage therapy for MAPK and checkpoint inhibitor-resistant melanoma.; EMBO Mol Med, 10: [no pages] |
|
GSE95153 |
| Echeverria, Gloria V et al. (2023) Predictors of success in establishing orthotopic patient-derived xenograft models of triple negative breast cancer.; NPJ Breast Cancer, 9: 2 |
|
GSE216333 |
| Eck, Samantha R et al. (2020) Stress Regulation of Sustained Attention and the Cholinergic Attention System.; Biol Psychiatry, 88: 566-575 |
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GSE147806 |
| Eck, Samantha R et al. (2022) Effects of early life adversity on male reproductive behavior and the medial preoptic area transcriptome.; Neuropsychopharmacology, 47: 1231-1239 |
|
GSE174753 |
| Eckel-Mahan, Kristin L et al. (2013) Reprogramming of the circadian clock by nutritional challenge.; Cell, 155: 1464-78 |
|
GSE52333 |
| Eckel-Passow, Jeanette E et al. (2014) ANKS1B is a smoking-related molecular alteration in clear cell renal cell carcinoma.; BMC Urol, 14: 14 |
|
GSE46699 |
| Eckerle, S et al. (2009) Gene expression profiling of isolated tumour cells from anaplastic large cell lymphomas: insights into its cellular origin, pathogenesis and relation to Hodgkin lymphoma.; Leukemia, 23: 2129-38 |
|
GSE14879 |
| Eckhoff, Kyle et al. (2021) The Association between Tau Protein Level in Cerebrospinal Fluid and Cognitive Status: A Large-Scale Analysis of GAAIN Database.; Brain Sci, 11: [no pages] |
|
GSE129296 |
| Eckler, Matthew J et al. (2011) Fezf1 and Fezf2 are required for olfactory development and sensory neuron identity.; J Comp Neurol, 519: 1829-46 |
|
GSE26064 |
| Economo, Michael N et al. (2018) Distinct descending motor cortex pathways and their roles in movement.; Nature, 563: 79-84 |
|
GSE119182 |
| Edara, Venkata Viswanadh et al. (2020) Insights into the Gene Expression Profiles of Active and Restricted Red/Green-HIV+Human Astrocytes: Implications for Shock or Lock Therapies in the Brain.; J Virol, 94: [no pages] |
|
GSE141756 |
| Edeline, Julien et al. (2012) Description of 2 angiogenic phenotypes in clear cell renal cell carcinoma.; Hum Pathol, 43: 1982-90 |
|
GSE29609 |
| Edelstein, Leonard C et al. (2013) Racial differences in human platelet PAR4 reactivity reflect expression of PCTP and miR-376c.; Nat Med, 19: 1609-16 |
|
GSE49921 |
| Edens, Brittany M et al. (2019) FMRP Modulates Neural Differentiation through m6A-Dependent mRNA Nuclear Export.; Cell Rep, 28: 845-854.e5 |
|
GSE121809 |
| Edgar, Contessa E et al. (2015) Ribosomal and immune transcripts associate with relapse in acquired ADAMTS13-deficient thrombotic thrombocytopenic purpura.; PLoS One, 10: e0117614 |
|
GSE36418 |
| Edgar, John M et al. (2017) Fibrin hydrogels induce mixed dorsal/ventral spinal neuron identities during differentiation of human induced pluripotent stem cells.; Acta Biomater, 51: 237-245 |
|
GSE79442 |
| Edlow, Andrea G et al. (2014) Maternal obesity affects fetal neurodevelopmental and metabolic gene expression: a pilot study.; PLoS One, 9: e88661 |
|
GSE48521 |
| Edlow, Andrea G et al. (2019) Significant Effects of Maternal Diet During Pregnancy on the Murine Fetal Brain Transcriptome and Offspring Behavior.; Front Neurosci, 13: 1335 |
|
GSE133525 |
| Edlund, Karolina et al. (2021) Gene Expression-Based Prediction of Neoadjuvant Chemotherapy Response in Early Breast Cancer: Results of the Prospective Multicenter EXPRESSION Trial.; Clin Cancer Res, 27: 2148-2158 |
|
GSE140494 |
| Edmonds, Rebecca D et al. (2011) Transcriptomic response of murine liver to severe injury and hemorrhagic shock: a dual-platform microarray analysis.; Physiol Genomics, 43: 1170-83 |
|
GSE26695 |
| Edmunds, Shelley J et al. (2012) Effects of kiwifruit extracts on colonic gene and protein expression levels in IL-10 gene-deficient mice.; Br J Nutr, 108: 113-29 |
|
GSE27684 |
| Edri, Reuven et al. (2015) Analysing human neural stem cell ontogeny by consecutive isolation of Notch active neural progenitors.; Nat Commun, 6: 6500 |
|
GSE65369 |
| Edwards, Alexander D et al. (2003) Relationships among murine CD11c(high) dendritic cell subsets as revealed by baseline gene expression patterns.; J Immunol, 171: 47-60 |
|
GSE339 |
| Edwards, Andrea D et al. (2025) Phenotypic and Functional Characterization of Oncohistone Mutations in Breast Cancers.; bioRxiv, [no vol.]: [no pages] |
|
GSE295718 |
| Edwards, George A et al. (2024) TMEM106B coding variant is protective and deletion detrimental in a mouse model of tauopathy.; Acta Neuropathol, 147: 61 |
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GSE223376.1 GSE223376.2 |
| Efthymiou, Anastasia G et al. (2015) Rescue of an in vitro neuron phenotype identified in Niemann-Pick disease, type C1 induced pluripotent stem cell-derived neurons by modulating the WNT pathway and calcium signaling.; Stem Cells Transl Med, 4: 230-8 |
|
GSE55379 |
| Egervari, Gabor et al. (2017) Striatal H3K27 Acetylation Linked to Glutamatergic Gene Dysregulation in Human Heroin Abusers Holds Promise as Therapeutic Target.; Biol Psychiatry, 81: 585-594 |
|
GSE87823 |
| Egervari, Gabor et al. (2025) Decreased voluntary alcohol intake and ventral striatal epigenetic and transcriptional remodeling in male Acss2 KO mice.; Neuropharmacology, 265: 110258 |
|
GSE249119 |
| Egervari, Gabor et al. (2026) Multiomic single nuclei profiling the mouse hippocampus reveals that ACSS2 confers neuronal resilience to tauopathy.; Alzheimers Dement, 22: e70998 |
|
GSE294261 |
| Egger, Anna et al. (2012) PGC-1? determines light damage susceptibility of the murine retina.; PLoS One, 7: e31272 |
|
GSE80265 |
| Egiazarian, Milena A et al. (2022) Age- and sex-dependent effects of DNA glycosylase Neil3 on amyloid pathology, adult neurogenesis, and memory in a mouse model of Alzheimer's disease.; Free Radic Biol Med, 193: 685-693 |
|
GSE197199 |
| Egilmezer, Ece et al. (2024) Human cytomegalovirus (CMV) dysregulates neurodevelopmental pathways in cerebral organoids.; Commun Biol, 7: 340 |
|
GSE217832 |
| Egli, Dieter et al. (2010) Recipient cell nuclear factors are required for reprogramming by nuclear transfer.; Development, 137: 1953-63 |
|
GSE21609 |
| Egli, Dieter et al. (2011) Reprogramming within hours following nuclear transfer into mouse but not human zygotes.; Nat Commun, 2: 488 |
|
GSE24631 |
| Egolf, Shaun et al. (2019) LSD1 Inhibition Promotes Epithelial Differentiation through Derepression of Fate-Determining Transcription Factors.; Cell Rep, 28: 1981-1992.e7 |
|
GSE133766 |
| Eguchi, Akiko et al. (2009) Efficient siRNA delivery into primary cells by a peptide transduction domain-dsRNA binding domain fusion protein.; Nat Biotechnol, 27: 567-71 |
|
GSE15723 |
| Ehlers, A et al. (2008) Histone acetylation and DNA demethylation of B cells result in a Hodgkin-like phenotype.; Leukemia, 22: 835-41 |
|
GSE8388 |
| Ehlers, Anke et al. (2015) The glucosinolate metabolite 1-methoxy-3-indolylmethyl alcohol induces a gene expression profile in mouse liver similar to the expression signature caused by known genotoxic hepatocarcinogens.; Mol Nutr Food Res, 59: 685-97 |
|
GSE61494 |
| Ehling, Manuel et al. (2020) B55α/PP2A Limits Endothelial Cell Apoptosis During Vascular Remodeling: A Complementary Approach To Disrupt Pathological Vessels?; Circ Res, 127: 707-723 |
|
GSE202220 |
| Ehlken, Christoph et al. (2019) Expression of Angiogenic and Inflammatory Factors in Choroidal Neovascularisation-Derived Retinal Pigment Epithelium.; Ophthalmic Res, 61: 174-182 |
|
GSE103060 |
| Ehmer, Ursula et al. (2014) Organ size control is dominant over Rb family inactivation to restrict proliferation in vivo.; Cell Rep, 8: 371-81 |
|
GSE43631 |
| Ehrenberg, Alexander J et al. (2025) Pathways underlying selective neuronal vulnerability in Alzheimer's disease: Contrasting the vulnerable locus coeruleus to the resilient substantia nigra.; Alzheimers Dement, 21: e70087 |
|
GSE273787 |
| Ehrlich, Marc et al. (2015) Distinct Neurodegenerative Changes in an Induced Pluripotent Stem Cell Model of Frontotemporal Dementia Linked to Mutant TAU Protein.; Stem Cell Reports, 5: 83-96 |
|
GSE62935 |
| Ehrlich, Marc et al. (2017) Rapid and efficient generation of oligodendrocytes from human induced pluripotent stem cells using transcription factors.; Proc Natl Acad Sci U S A, 114: E2243-E2252 |
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GSE61358 GSE79912 |
| Ehrman, Jacqueline M et al. (2022) Formation of the Mouse Internal Capsule and Cerebral Peduncle: A Pioneering Role for Striatonigral Axons as Revealed inIsl1Conditional Mutants.; J Neurosci, 42: 3344-3364 |
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GSE198385 |
| Ehrmann, Ingrid et al. (2016) A SLM2 Feedback Pathway Controls Cortical Network Activity and Mouse Behavior.; Cell Rep, 17: 3269-3280 |
|
GSE70895 |
| Ehsani, Marzieh et al. (2025) Infection and herbicide exposure implicate c-Abl kinase in α-Synuclein Ser129 phosphorylation.; Cell Commun Signal, 23: 396 |
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GSE287574.1 GSE287574.2 |
| Eiber, Nane et al. (2019) Lack of Desmin in Mice Causes Structural and Functional Disorders of Neuromuscular Junctions.; Front Mol Neurosci, 13: 567084 |
|
GSE154573 |
| Eichelberger, Eric J et al. (2021) Increased systemic HSP70B levels in spinal muscular atrophy infants.; Ann Clin Transl Neurol, 8: 1495-1501 |
|
GSE174056 |
| Eichner, Johannes et al. (2013) A toxicogenomic approach for the prediction of murine hepatocarcinogenesis using ensemble feature selection.; PLoS One, 8: e73938 |
|
GSE44783 |
| Eichner, Lillian J et al. (2023) HDAC3 is critical in tumor development and therapeutic resistance inKras-mutant non-small cell lung cancer.; Sci Adv, 9: eadd3243 |
|
GSE164757 GSE164758 GSE164755 GSE164756 |
| Eid, Stéphanie A et al. (2023) Single-cell RNA-seq uncovers novel metabolic functions of Schwann cells beyond myelination.; J Neurochem, 166: 367-388 |
|
GSE206305 |
| Eid, Stéphanie A et al. (2024) Transcriptomic profiling of sciatic nerves and dorsal root ganglia reveals site-specific effects of prediabetic neuropathy.; Transl Res, 270: 24-41 |
|
GSE225224 |
| Eilon, Tali et al. (2011) Forced activation of Stat5 subjects mammary epithelial cells to DNA damage and preferential induction of the cellular response mechanism during proliferation.; J Cell Physiol, 226: 616-26 |
|
GSE15119 |
| Einecke, Gunilla et al. (2010) A molecular classifier for predicting future graft loss in late kidney transplant biopsies.; J Clin Invest, 120: 1862-72 |
|
GSE21374 |
| Eintracht, Jonathan et al. (2024) Disruption of common ocular developmental pathways in patient-derived optic vesicle models of microphthalmia.; Stem Cell Reports, 19: 839-858 |
|
GSE265940 |
| Eipper-Mains, J E et al. (2013) Effects of cocaine and withdrawal on the mouse nucleus accumbens transcriptome.; Genes Brain Behav, 12: 21-33 |
|
GSE43410 |
| Eisenberg, Iris et al. (2008) Mitochondrial processes are impaired in hereditary inclusion body myopathy.; Hum Mol Genet, 17: 3663-74 |
|
GSE12648 |
| Eisfeld, Amie J et al. (2024) A compendium of multi-omics data illuminating host responses to lethal human virus infections.; Sci Data, 11: 328 |
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GSE68380 GSE77192 GSE67473 |
| Eisinger, Brian E et al. (2013) Large scale expression changes of genes related to neuronal signaling and developmental processes found in lateral septum of postpartum outbred mice.; PLoS One, 8: e63824 |
|
GSE43627 |
| Eisinger, Brian E et al. (2013) Medial prefrontal cortex: genes linked to bipolar disorder and schizophrenia have altered expression in the highly social maternal phenotype.; Front Behav Neurosci, 8: 110 |
|
GSE54426 |
| Eizirik, Décio L et al. (2012) The human pancreatic islet transcriptome: expression of candidate genes for type 1 diabetes and the impact of pro-inflammatory cytokines.; PLoS Genet, 8: e1002552 |
|
GSE35296 |
| Ejarque, Miriam et al. (2013) Characterization of the transcriptional activity of the basic helix-loop-helix (bHLH) transcription factor Atoh8.; Biochim Biophys Acta, 1829: 1175-83 |
|
GSE43536 |
| Ejlerskov, Patrick et al. (2015) Lack of Neuronal IFN-?-IFNAR Causes Lewy Body- and Parkinson's Disease-like Dementia.; Cell, 163: 324-39 |
|
GSE63815 |
| Eken, Ceylan et al. (2010) Ectosomes released by polymorphonuclear neutrophils induce a MerTK-dependent anti-inflammatory pathway in macrophages.; J Biol Chem, 285: 39914-21 |
|
GSE14419 |
| Ekin, Umut et al. (2021) Evaluation of ATAD2 as a Potential Target in Hepatocellular Carcinoma.; J Gastrointest Cancer, 52: 1356-1369 |
|
GSE178243 |
| Ekstrand, Mats I et al. (2014) Molecular profiling of neurons based on connectivity.; Cell, 157: 1230-42 |
|
GSE55800 |
| Ektesabi, Amin M et al. (2021) Mesenchymal Stem/Stromal Cells Increase Cardiac miR-187-3p Expression in a Polymicrobial Animal Model of Sepsis.; Shock, 56: 133-141 |
|
GSE40180 |
| El Aidy, Sahar et al. (2012) Temporal and spatial interplay of microbiota and intestinal mucosa drive establishment of immune homeostasis in conventionalized mice.; Mucosal Immunol, 5: 567-79 |
|
GSE32513 |
| El Ashkar, Sara et al. (2018) LEDGF/p75 is dispensable for hematopoiesis but essential for MLL-rearranged leukemogenesis.; Blood, 131: 95-107 |
|
GSE104138 |
| El Chartouni, Carol et al. (2010) Comprehensive analysis of TLR4-induced transcriptional responses in interleukin 4-primed mouse macrophages.; Immunobiology, 215: 780-7 |
|
GSE21895 |
| El Hayek, Lauretta et al. (2020) KDM5Amutations identified in autism spectrum disorder using forward genetics.; Elife, 9: [no pages] |
|
GSE147435 |
| El Hayek, Lauretta et al. (2023) Disruption of the autism gene and chromatin regulator KDM5A alters hippocampal cell identity.; Sci Adv, 9: eadi0074 |
|
GSE235490 |
| El Kasmi, Karim C et al. (2006) General nature of the STAT3-activated anti-inflammatory response.; J Immunol, 177: 7880-8 |
|
GSE5589 |
| El Kasmi, Karim C et al. (2007) Cutting edge: A transcriptional repressor and corepressor induced by the STAT3-regulated anti-inflammatory signaling pathway.; J Immunol, 179: 7215-9 |
|
GSE9509 |
| El Khouri, E et al. (2021) Wnt/β-catenin pathway and cell adhesion deregulation in CSDE1-related intellectual disability and autism spectrum disorders.; Mol Psychiatry, 26: 3572-3585 |
|
GSE162954 |
| El Soury, Marwa et al. (2017) Soluble Neuregulin1 Down-Regulates Myelination Genes in Schwann Cells.; Front Mol Neurosci, 11: 157 |
|
GSE104324 |
| El Wakil, Abeer et al. (2012) Dkk3 is a component of the genetic circuitry regulating aldosterone biosynthesis in the adrenal cortex.; Hum Mol Genet, 21: 4922-9 |
|
GSE37825 |
| El Waly, Bilal et al. (2022) Neuroblasts contribute to oligodendrocytes generation upon demyelination in the adult mouse brain.; iScience, 25: 105102 |
|
GSE130355 |
| El-Chaar, Nader N et al. (2014) Genomic classification of the RAS network identifies a personalized treatment strategy for lung cancer.; Mol Oncol, 8: 1339-54 |
|
GSE47206 |
| El-Okdi, Nasser et al. (2008) Effects of cardiotonic steroids on dermal collagen synthesis and wound healing.; J Appl Physiol (1985), 105: 30-6 |
|
GSE9806 |
| El-Saafin, Farrah et al. (2022) Loss of TAF8 causes TFIID dysfunction and p53-mediated apoptotic neuronal cell death.; Cell Death Differ, 29: 1013-1027 |
|
GSE198502 GSE198503 |
| El-Sehemy, Ahmed et al. (2020) Norrin mediates tumor-promoting and -suppressive effects in glioblastoma via Notch and Wnt.; J Clin Invest, 130: 3069-3086 |
|
GSE128255 |
| El-Zaatari, Mohamad et al. (2013) Gli1 deletion prevents Helicobacter-induced gastric metaplasia and expansion of myeloid cell subsets.; PLoS One, 8: e58935 |
|
GSE43693 |
| Elahi, Lubayna S et al. (2024) Valproic acid targets IDH1 mutants through alteration of lipid metabolism.; NPJ Metab Health Dis, 2: 20 |
|
GSE273401 GSE273404 |
| Elangovan, Ashuvinee et al. (2023) WCRC-25: A novel luminal Invasive Lobular Carcinoma cell line model.; bioRxiv, [no vol.]: [no pages] |
|
GSE221512 |
| Elashoff, Michael R et al. (2011) Development of a blood-based gene expression algorithm for assessment of obstructive coronary artery disease in non-diabetic patients.; BMC Med Genomics, 4: 26 |
|
GSE20681 GSE20680 |