List of all 21,931 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Hall, Ashley et al. (2019) RUNX repressesPmp22to drive neurofibromagenesis.; Sci Adv, 5: eaau8389 |
|
GSE122774 |
| Hall, Claire E et al. (2017) Progressive Motor Neuron Pathology and the Role of Astrocytes in a Human Stem Cell Model of VCP-Related ALS.; Cell Rep, 19: 1739-1749 |
|
GSE98289 GSE98290 GSE98288 |
| Hall, Diana et al. (2010) Peroxisomal and microsomal lipid pathways associated with resistance to hepatic steatosis and reduced pro-inflammatory state.; J Biol Chem, 285: 31011-23 |
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GSE12409 |
| Hall, Emma A et al. (2017) PLAA Mutations Cause a Lethal Infantile Epileptic Encephalopathy by Disrupting Ubiquitin-Mediated Endolysosomal Degradation of Synaptic Proteins.; Am J Hum Genet, 100: 706-724 |
|
GSE74735 |
| Hall, Eric T et al. (2024) Cytoneme signaling provides essential contributions to mammalian tissue patterning.; Cell, 187: 276-293.e23 |
|
GSE242161 |
| Hall, J S et al. (2011) Exon-array profiling unlocks clinically and biologically relevant gene signatures from formalin-fixed paraffin-embedded tumour samples.; Br J Cancer, 104: 971-81 |
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GSE27388 |
| Hall, Jennifer L et al. (2004) Genomic profiling of the human heart before and after mechanical support with a ventricular assist device reveals alterations in vascular signaling networks.; Physiol Genomics, 17: 283-91 |
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GSE974 |
| Hall, John C et al. (2012) Precise probes of type II interferon activity define the origin of interferon signatures in target tissues in rheumatic diseases.; Proc Natl Acad Sci U S A, 109: 17609-14 |
|
GSE41291 |
| Hall, John S et al. (2014) Investigation of radiosensitivity gene signatures in cancer cell lines.; PLoS One, 9: e86329 |
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GSE51370 |
| Hall, Liam G et al. (2024) Amyloid beta 42 alters cardiac metabolism and impairs cardiac function in male mice with obesity.; Nat Commun, 15: 258 |
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GSE213708 |
| Hall-Roberts, Hazel et al. (2020) TREM2 Alzheimer's variant R47H causes similar transcriptional dysregulation to knockout, yet only subtle functional phenotypes in human iPSC-derived macrophages.; Alzheimers Res Ther, 12: 151 |
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GSE157635 |
| Hallacli, Erinc et al. (2022) The Parkinson's disease protein alpha-synuclein is a modulator of processing bodies and mRNA stability.; Cell, 185: 2035-2056.e33 |
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GSE199349 |
| Hallam, Dean et al. (2017) An Induced Pluripotent Stem Cell Patient Specific Model of Complement Factor H (Y402H) Polymorphism Displays Characteristic Features of Age-Related Macular Degeneration and Indicates a Beneficial Role for UV Light Exposure.; Stem Cells, 35: 2305-2320 |
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GSE91087 |
| Halle, Cathinka et al. (2011) Membranous expression of ectodomain isoforms of the epidermal growth factor receptor predicts outcome after chemoradiotherapy of lymph node-negative cervical cancer.; Clin Cancer Res, 17: 5501-12 |
|
GSE29817 |
| Halle, Cathinka et al. (2012) Hypoxia-induced gene expression in chemoradioresistant cervical cancer revealed by dynamic contrast-enhanced MRI.; Cancer Res, 72: 5285-95 |
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GSE36562 |
| Hallen, L C et al. (2007) Antiproliferative activity of the human IFN-alpha-inducible protein IFI44.; J Interferon Cytokine Res, 27: 675-80 |
|
GSE22801 |
| Halloran, P F et al. (2013) Potential impact of microarray diagnosis of T cell-mediated rejection in kidney transplants: The INTERCOM study.; Am J Transplant, 13: 2352-63 |
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GSE48581 |
| Halperin, D et al. (2021) CDH2 mutation affecting N-cadherin function causes attention-deficit hyperactivity disorder in humans and mice.; Nat Commun, 12: 6187 |
|
GSE182698 |
| Halstead, Angela M et al. (2017) Bladder-cancer-associated mutations inRXRAactivate peroxisome proliferator-activated receptors to drive urothelial proliferation.; Elife, 6: [no pages] |
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GSE107735 |
| Ham, Daniel J et al. (2020) The neuromuscular junction is a focal point of mTORC1 signaling in sarcopenia.; Nat Commun, 11: 4510 |
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GSE139209 GSE139204 GSE139213 |
| Ham, Daniel J et al. (2022) Distinct and additive effects of calorie restriction and rapamycin in aging skeletal muscle.; Nat Commun, 13: 2025 |
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GSE171322 |
| Ham, Onju et al. (2025) Methotrexate-induced disruption of the serum-glucocorticoid inducible protein kinase 3 signaling pathway and its effects on brain development.; J Hazard Mater, 494: 138438 |
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GSE262517 |
| Hamad, Samera H et al. (2025) Activating NRF2E79Qmutation alters the differentiation of human non-small cell lung cancer.; Cancer Gene Ther, 32: 1428-1438 |
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GSE289043 |
| Hamagami, Nicole et al. (2023) NSD1 deposits histone H3 lysine 36 dimethylation to pattern non-CG DNA methylation in neurons.; Mol Cell, 83: 1412-1428.e7 |
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GSE212844 |
| Hamamura, R S et al. (2007) Induction of heme oxygenase-1 by cobalt protoporphyrin enhances the antitumour effect of bortezomib in adult T-cell leukaemia cells.; Br J Cancer, 97: 1099-105 |
|
GSE6034 |
| Hamanaka, Robert B et al. (2025) Arginine promotes the activation of human lung fibroblasts independent of its metabolism.; Biochem J, 482: 823-38 |
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GSE273882 |
| Hamano, Satoshi et al. (2024) Characterization of pathological stages in a mouse model of progressive multiple sclerosis.; Neurosci Res, [no vol.]: [no pages] |
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GSE243235 |
| Hamatani, Toshio et al. (2004) Dynamics of global gene expression changes during mouse preimplantation development.; Dev Cell, 6: 117-31 |
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GSE936 |
| Hamby, Mary E et al. (2012) Inflammatory mediators alter the astrocyte transcriptome and calcium signaling elicited by multiple G-protein-coupled receptors.; J Neurosci, 32: 14489-510 |
|
GSE36089 |
| Hamdane, Nourdine et al. (2014) Conditional inactivation of Upstream Binding Factor reveals its epigenetic functions and the existence of a somatic nucleolar precursor body.; PLoS Genet, 10: e1004505 |
|
GSE55450 |
| Hamed, Omar et al. (2022) α and β catalytic subunits of cAMP-dependent protein kinase regulate formoterol-induced inflammatory gene expression changes in human bronchial epithelial cells.; Br J Pharmacol, 179: 4593-4614 |
|
GSE202436 |
| Hameed, Saira et al. (2017) Thyroid Hormone Receptor Beta in the Ventromedial Hypothalamus Is Essential for the Physiological Regulation of Food Intake and Body Weight.; Cell Rep, 19: 2202-2209 |
|
GSE98690 |
| Hamel, Katherine et al. (2024) Cerebellar Heterogeneity and Selective vulnerability in Spinocerebellar Ataxia Type 1 (SCA1).; Neurobiol Dis, 197: 106530 |
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GSE255633 |
| Hamidi, Tewfik et al. (2012) Nuclear protein 1 promotes pancreatic cancer development and protects cells from stress by inhibiting apoptosis.; J Clin Invest, 122: 2092-103 |
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GSE35463 |
| Hamilton, Haylee L et al. (2024) FABP7 drives an inflammatory response in human astrocytes and is upregulated in Alzheimer's disease.; Geroscience, 46: 1607-1625 |
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GSE214628 |
| Hamilton, Kelly A et al. (2018) Mice lacking the transcriptional regulator Bhlhe40 have enhanced neuronal excitability and impaired synaptic plasticity in the hippocampus.; PLoS One, 13: e0196223 |
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GSE85959 |
| Hamilton, Laura K et al. (2015) Aberrant Lipid Metabolism in the Forebrain Niche Suppresses Adult Neural Stem Cell Proliferation in an Animal Model of Alzheimer's Disease.; Cell Stem Cell, 17: 397-411 |
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GSE60460 |
| Hamilton, Laura K et al. (2022) Stearoyl-CoA Desaturase inhibition reverses immune, synaptic and cognitive impairments in an Alzheimer's disease mouse model.; Nat Commun, 13: 2061 |
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GSE167601 GSE189693 |
| Hamm, Christina M et al. (2010) NOD2 status and human ileal gene expression.; Inflamm Bowel Dis, 16: 1649-57 |
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GSE17594 |
| Hammamieh, Rasha et al. (2013) Transcriptomic analysis of the effects of a fish oil enriched diet on murine brains.; PLoS One, 9: e90425 |
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GSE46933 |
| Hammer, Michael et al. (2006) Dual specificity phosphatase 1 (DUSP1) regulates a subset of LPS-induced genes and protects mice from lethal endotoxin shock.; J Exp Med, 203: 15-20 |
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GSE3565 |
| Hammer, Paul et al. (2010) mRNA-seq with agnostic splice site discovery for nervous system transcriptomics tested in chronic pain.; Genome Res, 20: 847-60 |
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GSE20895 |
| Hammerich-Hille, Stephanie et al. (2010) SAFB1 mediates repression of immune regulators and apoptotic genes in breast cancer cells.; J Biol Chem, 285: 3608-16 |
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GSE15548 |
| Hammitzsch, Ariane et al. (2015) CBP30, a selective CBP/p300 bromodomain inhibitor, suppresses human Th17 responses.; Proc Natl Acad Sci U S A, 112: 10768-73 |
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GSE71231 |
| Hammond, Taylar et al. (2026) The FAM53C/DYRK1A axis regulates the G1/S transition of the cell cycle.; Elife, 14: [no pages] |
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GSE282945 |
| Hammoud, Batoul et al. (2024) Discordant Effects of Polyamine Depletion by DENSpm and DFMO on β-cell Cytokine Stress and Diabetes Outcomes in Mice.; Endocrinology, 165: [no pages] |
|
GSE242725 |
| Hamnett, Ryan et al. (2019) Vasoactive intestinal peptide controls the suprachiasmatic circadian clock network via ERK1/2 and DUSP4 signalling.; Nat Commun, 10: 542 |
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GSE113797 |
| Hamon, Annaïg et al. (2017) Retinal Degeneration Triggers the Activation of YAP/TEAD in Reactive Müller Cells.; Invest Ophthalmol Vis Sci, 58: 1941-1953 |
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GSE94534 |
| Hamon, Annaïg et al. (2019) Linking YAP to Müller Glia Quiescence Exit in the Degenerative Retina.; Cell Rep, 27: 1712-1725.e6 |
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GSE121858 |
| Hamouchene, Hamza et al. (2011) Influence of cell cycle on responses of MCF-7 cells to benzo[a]pyrene.; BMC Genomics, 12: 333 |
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GSE26917 |
| Hampton, Thomas H et al. (2012) Does the F508-CFTR mutation induce a proinflammatory response in human airway epithelial cells?; Am J Physiol Lung Cell Mol Physiol, 303: L509-18 |
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GSE30439 |
| Hamza, Mohamed Sabry et al. (2009) De-novo identification of PPARgamma/RXR binding sites and direct targets during adipogenesis.; PLoS One, 4: e4907 |
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GSE12929 |
| Han, Bin et al. (2020) Upregulation of neuronal PGC-1α ameliorates cognitive impairment induced by chronic cerebral hypoperfusion.; Theranostics, 10: 2832-2848 |
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GSE134257 |
| Han, Bin et al. (2021) Microglial PGC-1α protects against ischemic brain injury by suppressing neuroinflammation.; Genome Med, 13: 47 |
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GSE152871 GSE152769 GSE124874 |
| Han, Bing et al. (2022) Atmospheric particulate matter aggravates cns demyelination through involvement of TLR-4/NF-kB signaling and microglial activation.; Elife, 11: [no pages] |
|
GSE183098 |
| Han, Claudia Z et al. (2023) Human microglia maturation is underpinned by specific gene regulatory networks.; Immunity, 56: 2152-2171.e13 |
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GSE226705 |
| Han, Dong et al. (2025) Multipotent neural stem cells originating from neuroepithelium exist outside the mouse central nervous system.; Nat Cell Biol, 27: 605-618 |
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GSE151649 |
| Han, Dong Wook et al. (2011) Direct reprogramming of fibroblasts into epiblast stem cells.; Nat Cell Biol, 13: 66-71 |
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GSE21516 |
| Han, Dong Wook et al. (2012) Direct reprogramming of fibroblasts into neural stem cells by defined factors.; Cell Stem Cell, 10: 465-72 |
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GSE30500 |
| Han, Dong Wook et al. (2013) Sox2 Level Is a Determinant of Cellular Reprogramming Potential.; PLoS One, 8: e67594 |
|
GSE15358 |
| Han, Han et al. (2013) Synergistic re-activation of epigenetically silenced genes by combinatorial inhibition of DNMTs and LSD1 in cancer cells.; PLoS One, 8: e75136 |
|
GSE41676 |
| Han, Hong et al. (2022) Systematic exploration of dynamic splicing networks reveals conserved multistage regulators of neurogenesis.; Mol Cell, 82: 2982-2999.e14 |
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GSE186387 GSE186386 GSE186388 |
| Han, Hye-Jung et al. (2008) SATB1 reprogrammes gene expression to promote breast tumour growth and metastasis.; Nature, 452: 187-93 |
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GSE5417.2 GSE5417.1 |
| Han, Jaeseok et al. (2013) ER-stress-induced transcriptional regulation increases protein synthesis leading to cell death.; Nat Cell Biol, 15: 481-90 |
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GSE35681 |
| Han, Jianyong et al. (2010) Tbx3 improves the germ-line competency of induced pluripotent stem cells.; Nature, 463: 1096-100 |
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GSE19164 |
| Han, Jichang et al. (2025) FGL2-induced metabolic dysregulation in enteric neural crest cells provides insight into Hirschsprung disease pathogenesis.; iScience, 28: 113423 |
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GSE305114 |
| Han, Jisoo S et al. (2020) CRL5-dependent regulation of the small GTPases ARL4C and ARF6 controls hippocampal morphogenesis.; Proc Natl Acad Sci U S A, 117: 23073-23084 |
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GSE155379 |
| Han, Jiyeon et al. (2025) Persistently increased expression of PKMzeta and unbiased gene expression profiles identify hippocampal molecular traces of a long-term active place avoidance memory and 'shadow' proteins.; bioRxiv, [no vol.]: [no pages] |
|
GSE100225 |
| Han, Kim et al. (2023) Boosting NAD preferentially blunts Th17 inflammation via arginine biosynthesis and redox control in healthy and psoriasis subjects.; Cell Rep Med, 4: 101157 |
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GSE237552 GSE237555 |
| Han, Kyung Ho et al. (2018) Migration-based selections of antibodies that convert bone marrow into trafficking microglia-like cells that reduce brain amyloid ?.; Proc Natl Acad Sci U S A, 115: E372-E381 |
|
GSE107006 |
| Han, Lianyong et al. (2023) Nanoparticle-Exposure-Triggered Virus Reactivation Induces Lung Emphysema in Mice.; ACS Nano, 17: 21056-21072 |
|
GSE223818 |
| Han, Lifang et al. (2025) Non-canonical roles of Keap1/Nrf2 in regulating quiescence and early activation in adult muscle stem cells.; Nat Commun, 16: 10505 |
|
GSE250459 |
| Han, May H et al. (2012) Janus-like opposing roles of CD47 in autoimmune brain inflammation in humans and mice.; J Exp Med, 209: 1325-34 |
|
GSE38010 |
| Han, Peng et al. (2022) Cbln1 regulates axon growth and guidance in multiple neural regions.; PLoS Biol, 20: e3001853 |
|
GSE169448 |
| Han, Rafael T et al. (2023) Microglial pattern recognition via IL-33 promotes synaptic refinement in developing corticothalamic circuits in mice.; J Exp Med, 220: [no pages] |
|
GSE218369 |
| Han, Sangwoo T et al. (2023) Gene expression changes in Tay-Sachs disease begin early in fetal brain development.; J Inherit Metab Dis, [no vol.]: [no pages] |
|
GSE224860 |
| Han, Sisu et al. (2021) Proneural genes define ground-state rules to regulate neurogenic patterning and cortical folding.; Neuron, 109: 2847-2863.e11 |
|
GSE151775 |
| Han, Wanting et al. (2022) Exploiting the tumor-suppressive activity of the androgen receptor by CDK4/6 inhibition in castration-resistant prostate cancer.; Mol Ther, 30: 1628-1644 |
|
GSE179687 |
| Han, Wanting et al. (2022) RB1 loss in castration-resistant prostate cancer confers vulnerability to LSD1 inhibition.; Oncogene, 41: 852-864 |
|
GSE176403 |
| Han, Xiaojuan et al. (2022) Neuronal NR4A1 deficiency drives complement-coordinated synaptic stripping by microglia in a mouse model of lupus.; Signal Transduct Target Ther, 7: 50 |
|
GSE154288 |
| Han, Yoon-Chi et al. (2015) An allelic series of miR-17 ? 92-mutant mice uncovers functional specialization and cooperation among members of a microRNA polycistron.; Nat Genet, 47: 766-75 |
|
GSE63813 |
| Hanada, Toshikatsu et al. (2013) CLP1 links tRNA metabolism to progressive motor-neuron loss.; Nature, 495: 474-80 |
|
GSE35924 |
| Hanaford, Allison R et al. (2016) DiSCoVERing Innovative Therapies for Rare Tumors: Combining Genetically Accurate Disease Models with In Silico Analysis to Identify Novel Therapeutic Targets.; Clin Cancer Res, [no vol.]: [no pages] |
|
GSE77475 |
| Hanamsagar, Richa et al. (2017) Generation of a microglial developmental index in mice and in humans reveals a sex difference in maturation and immune reactivity.; Glia, 65: 1504-1520 |
|
GSE99622 |
| Hanamura, I et al. (2006) Prognostic value of cyclin D2 mRNA expression in newly diagnosed multiple myeloma treated with high-dose chemotherapy and tandem autologous stem cell transplantations.; Leukemia, 20: 1288-90 |
|
GSE2658 |
| Hanan, Mor et al. (2020) A Parkinson's disease CircRNAs Resource reveals a link between circSLC8A1 and oxidative stress.; EMBO Mol Med, 12: e11942 |
|
GSE133101 |
| Handfield, Martin et al. (2005) Distinct transcriptional profiles characterize oral epithelium-microbiota interactions.; Cell Microbiol, 7: 811-23 |
|
GSE9723 |
| Handler, Hillary P et al. (2023) Decreasing mutant ATXN1 nuclear localization improves a spectrum of SCA1-like phenotypes and brain region transcriptomic profiles.; Neuron, 111: 493-507.e6 |
|
GSE218303 |
| Hanč, Pavel et al. (2023) Multimodal control of dendritic cell functions by nociceptors.; Science, 379: eabm5658 |
|
GSE217502 |