List of all 21,933 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Iacoba?, Dumitru A et al. (2018) ACTH and PMX53 recover synaptic transcriptome alterations in a rat model of infantile spasms.; Sci Rep, 8: 5722 |
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GSE84585 |
| Iacobas, D A et al. (2013) Prenatal corticosteroids modify glutamatergic and GABAergic synapse genomic fabric: insights from a novel animal model of infantile spasms.; J Neuroendocrinol, 25: 964-79 |
|
GSE44858 |
| Iacobas, Dumitru A et al. (2003) Array analysis of gene expression in connexin-43 null astrocytes.; Physiol Genomics, 15: 177-90 |
|
GSE580 |
| Iacobas, Dumitru A et al. (2005) Sensitivity of the brain transcriptome to connexin ablation.; Biochim Biophys Acta, 1711: 183-96 |
|
GSE1954 |
| Iacobas, Dumitru A et al. (2007) Connexin-dependent transcellular transcriptomic networks in mouse brain.; Prog Biophys Mol Biol, 94: 169-85 |
|
GSE6355 |
| Iacobas, Dumitru A et al. (2007) Gap junction and purinergic P2 receptor proteins as a functional unit: insights from transcriptomics.; J Membr Biol, [no vol.]: [no pages] |
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GSE8105 |
| Iacobas, Dumitru A et al. (2008) Similar transcriptomic alterations in Cx43 knockdown and knockout astrocytes.; Cell Commun Adhes, 15: 195-206 |
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GSE8168 |
| Iacobas, Dumitru A et al. (2018) Estrogen Protects Neurotransmission Transcriptome During Status Epilepticus.; Front Neurosci, 12: 332 |
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GSE107725 |
| Iacobas, Dumitru A et al. (2020) Cellular Environment Remodels the Genomic Fabrics of Functional Pathways in Astrocytes.; Genes (Basel), 11: [no pages] |
|
GSE109035 |
| Iacobas, Dumitru Andrei et al. (2025) Neurotransmission Sex Dichotomy in the Rat Hypothalamic Paraventricular Nucleus in Healthy and Infantile Spasm Model.; Curr Issues Mol Biol, 47: [no pages] |
|
GSE128091 |
| Iacobas, S et al. (2012) The connexin43-dependent transcriptome during brain development: importance of genetic background.; Brain Res, 1487: 131-9 |
|
GSE37239 |
| Iacobas, Sanda et al. (2012) Plasticity of the myelination genomic fabric.; Mol Genet Genomics, 287: 237-46 |
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GSE18726.1 GSE18726.2 |
| Iacono, Giovanni et al. (2013) Early phase of plasticity-related gene regulation and SRF dependent transcription in the hippocampus.; PLoS One, 8: e68078 |
|
GSE46864 |
| Iacono, Giovanni et al. (2017) Integrated transcriptional analysis unveils the dynamics of cellular differentiation in the developing mouse hippocampus.; Sci Rep, 7: 18073 |
|
GSE79380 |
| Iacovino, Michelina et al. (2011) HoxA3 is an apical regulator of haemogenic endothelium.; Nat Cell Biol, 13: 72-8 |
|
GSE25079 |
| Iancu, Ovidiu D et al. (2013) Differential network analysis reveals genetic effects on catalepsy modules.; PLoS One, 8: e58951 |
|
GSE37755 |
| Iancu, Ovidiu D et al. (2013) Selection for drinking in the dark alters brain gene coexpression networks.; Alcohol Clin Exp Res, 37: 1295-303 |
|
GSE93515 |
| Iancu, Ovidiu D et al. (2015) Cosplicing network analysis of mammalian brain RNA-Seq data utilizing WGCNA and Mantel correlations.; Front Genet, 6: 174 |
|
GSE62669 |
| Ianculescu, Irina et al. (2012) Selective roles for cAMP response element-binding protein binding protein and p300 protein as coregulators for androgen-regulated gene expression in advanced prostate cancer cells.; J Biol Chem, 287: 4000-13 |
|
GSE31873 |
| Iannielli, Angelo et al. (2018) Pharmacological Inhibition of Necroptosis Protects from Dopaminergic Neuronal Cell Death in Parkinson's Disease Models.; Cell Rep, 22: 2066-2079 |
|
GSE109228 |
| Iannitelli, Alexa F et al. (2023) The Neurotoxin DSP-4 Dysregulates the Locus Coeruleus-Norepinephrine System and Recapitulates Molecular and Behavioral Aspects of Prodromal Neurodegenerative Disease.; eNeuro, 10: [no pages] |
|
GSE221404 |
| Iannitelli, Alexa F et al. (2023) Tyrosinase-induced neuromelanin accumulation triggers rapid dysregulation and degeneration of the mouse locus coeruleus.; bioRxiv, [no vol.]: [no pages] |
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GSE226827 |
| Ianov, Lara et al. (2017) Hippocampal Transcriptomic Profiles: Subfield Vulnerability to Age and Cognitive Impairment.; Front Aging Neurosci, 9: 383 |
|
GSE101798 |
| Iba, Michiyo et al. (2024) Microglial and neuronal fates following inhibition of CSF-1R in synucleinopathy mouse model.; Brain Behav Immun, 123: 254-269 |
|
GSE255025 |
| Iba, Michiyo et al. (2025) Redirecting microglia phenotype via inhibition of NFAT1 ameliorates deficits in mouse model of synucleinopathies.; Exp Mol Med, 57: 2588-2607 |
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GSE223625 |
| Ibarra Sierra, E et al. (2012) Differential gene expression between skin and cervix induced by the E7 oncoprotein in a transgenic mouse model.; Virology, 433: 337-45 |
|
GSE36219 |
| Ibarra, Ignacio L et al. (2022) Comparative chromatin accessibility upon BDNF stimulation delineates neuronal regulatory elements.; Mol Syst Biol, 18: e10473 |
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GSE193910 GSE166959 |
| Ibi, Daisuke et al. (2017) Antipsychotic-induced Hdac2 transcription via NF-?B leads to synaptic and cognitive side effects.; Nat Neurosci, 20: 1247-1259 |
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GSE93918 |
| Iborra, Francisco J et al. (2023) Chemotherapy induces cell plasticity; controlling plasticity increases therapeutic response.; Signal Transduct Target Ther, 8: 256 |
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GSE229761 |
| Ibrahim, Abdulkhaleg et al. (2021) MeCP2 is a microsatellite binding protein that protects CA repeats from nucleosome invasion.; Science, 372: [no pages] |
|
GSE124239 |
| Ibrahim, Leena Ali et al. (2023) Nova proteins direct synaptic integration of somatostatin interneurons through activity-dependent alternative splicing.; Elife, 12: [no pages] |
|
GSE143316 |
| Ibrahim, Tarek et al. (2023) Sex-dependent differences in the genomic profile of lingual sensory neurons in naïve and tongue-tumor bearing mice.; Sci Rep, 13: 13117 |
|
GSE220448 |
| Icardi, Laura et al. (2012) The Sin3a repressor complex is a master regulator of STAT transcriptional activity.; Proc Natl Acad Sci U S A, 109: 12058-63 |
|
GSE35696 |
| Ichida, Justin K et al. (2018) Comparative genomic analysis of embryonic, lineage-converted and stem cell-derived motor neurons.; Development, 145: [no pages] |
|
GSE89619 |
| Ichimura, Atsuhiko et al. (2012) Dysfunction of lipid sensor GPR120 leads to obesity in both mouse and human.; Nature, 483: 350-4 |
|
GSE32095 |
| Ichinohe, Norihisa et al. (2021) Extracellular vesicles containing miR-146a-5p secreted by bone marrow mesenchymal cells activate hepatocytic progenitors in regenerating rat livers.; Stem Cell Res Ther, 12: 312 |
|
GSE154022 |
| Ichinose, Mari et al. (2021) The BMP antagonist gremlin 1 contributes to the development of cortical excitatory neurons, motor balance and fear responses.; Development, 148: [no pages] |
|
GSE152952 |
| Ichinose, Takashi et al. (2020) Tyr-Trp administration facilitates brain norepinephrine metabolism and ameliorates a short-term memory deficit in a mouse model of Alzheimer's disease.; PLoS One, 15: e0232233 |
|
GSE146400 |
| Ichiyanagi, Naoki et al. (2016) Establishment of In Vitro FUS-Associated Familial Amyotrophic Lateral Sclerosis Model Using Human Induced Pluripotent Stem Cells.; Stem Cell Reports, 6: 496-510 |
|
GSE76698 |
| Idaghdour, Youssef et al. (2010) Geographical genomics of human leukocyte gene expression variation in southern Morocco.; Nat Genet, 42: 62-7 |
|
GSE17065 |
| Idaghdour, Youssef et al. (2012) Evidence for additive and interaction effects of host genotype and infection in malaria.; Proc Natl Acad Sci U S A, [no vol.]: [no pages] |
|
GSE34404 |
| Ide, Takashi et al. (2009) Comparative study of sesame lignans (sesamin, episesamin and sesamolin) affecting gene expression profile and fatty acid oxidation in rat liver.; J Nutr Sci Vitaminol (Tokyo), 55: 31-43 |
|
GSE42693 |
| Ieda, Masaki et al. (2009) Cardiac fibroblasts regulate myocardial proliferation through beta1 integrin signaling.; Dev Cell, 16: 233-44 |
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GSE14412 GSE14411 |
| Ifkovits, Jamie L et al. (2014) Inhibition of TGF? signaling increases direct conversion of fibroblasts to induced cardiomyocytes.; PLoS One, 9: e89678 |
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GSE54022 |
| Iftikhar, Rida et al. (2022) Correction: Elevated ATGL in colon cancer cells and cancer stem cells promotes metabolic and tumorigenic reprogramming reinforced by obesity.; Oncogenesis, 11: 14 |
|
GSE195994 |
| Igarashi, Kazuhiko et al. (2014) Wearing red for signaling: the heme-bach axis in heme metabolism, oxidative stress response and iron immunology.; Tohoku J Exp Med, 232: 229-53 |
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GSE79806 |
| Igaz, Lionel M et al. (2011) Dysregulation of the ALS-associated gene TDP-43 leads to neuronal death and degeneration in mice.; J Clin Invest, 121: 726-38 |
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GSE25182 |
| Iglesias, José et al. (2012) PPARβ/δ affects pancreatic β cell mass and insulin secretion in mice.; J Clin Invest, 122: 4105-17 |
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GSE16048 |
| Ignatenko, Olesia et al. (2023) Mitochondrial dysfunction compromises ciliary homeostasis in astrocytes.; J Cell Biol, 222: [no pages] |
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GSE174343 |
| Iguchi, Akihiro et al. (2023) INPP5D modulates TREM2 loss-of-function phenotypes in a β-amyloidosis mouse model.; iScience, 26: 106375 |
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GSE172499 |
| Ihara, Motomasa et al. (2014) Paternal poly (ADP-ribose) metabolism modulates retention of inheritable sperm histones and early embryonic gene expression.; PLoS Genet, 10: e1004317 |
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GSE55009 |
| Ihle, Nathan T et al. (2012) Effect of KRAS oncogene substitutions on protein behavior: implications for signaling and clinical outcome.; J Natl Cancer Inst, 104: 228-39 |
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GSE27389 |
| Iida, Hitoshi et al. (2023) SERCA2 regulates proinsulin processing and processing enzyme maturation in pancreatic beta cells.; Diabetologia, 66: 2042-2061 |
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GSE207498 |
| Iida, Madoka et al. (2015) Pioglitazone suppresses neuronal and muscular degeneration caused by polyglutamine-expanded androgen receptors.; Hum Mol Genet, 24: 314-29 |
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GSE51807 |
| Iida, Madoka et al. (2025) Dysregulated synaptic gene expression in oligodendrocytes of spinal and bulbar muscular atrophy.; JCI Insight, 10: [no pages] |
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GSE247374 |
| Iida, Noriho et al. (2013) Commensal bacteria control cancer response to therapy by modulating the tumor microenvironment.; Science, 342: 967-70 |
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GSE51414 |
| Iijima, Keiya et al. (2024) Transcriptional features of low-grade neuroepithelial tumors with the BRAF V600E mutation associated with epileptogenicity.; Genes Cells, 29: 192-206 |
|
GSE252323 |
| Ijssennagger, Noortje et al. (2012) Dietary heme-mediated PPAR? activation does not affect the heme-induced epithelial hyperproliferation and hyperplasia in mouse colon.; PLoS One, 7: e43260 |
|
GSE37006 |
| Ijäs, Petra et al. (2007) Microarray analysis reveals overexpression of CD163 and HO-1 in symptomatic carotid plaques.; Arterioscler Thromb Vasc Biol, 27: 154-60 |
|
E-MEXP-268 |
| Ikawa, Tomokatsu et al. (2015) Induced Developmental Arrest of Early Hematopoietic Progenitors Leads to the Generation of Leukocyte Stem Cells.; Stem Cell Reports, 5: 716-727 |
|
GSE46158 |
| Ikeda, Kazuhiko et al. (2011) 3'UTR-truncated Hmga2 cDNA causes MPN-like hematopoiesis by conferring a clonal growth advantage at the level of HSC in mice.; Blood, 117: 5860-9 |
|
GSE24071 |
| Ikeda, Ryosuke et al. (2019) REV-ERBα and REV-ERBβ function as key factors regulating Mammalian Circadian Output.; Sci Rep, 9: 10171 |
|
GSE125696 |
| Ikenoshita, Susumu et al. (2023) A cyclic pyrrole-imidazole polyamide reduces pathogenic RNA in CAG/CTG triplet repeat neurological disease models.; J Clin Invest, 133: [no pages] |
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GSE235804 GSE210838 GSE235801 |
| Ikezu, Seiko et al. (2020) Inhibition of colony stimulating factor 1 receptor corrects maternal inflammation-induced microglial and synaptic dysfunction and behavioral abnormalities.; Mol Psychiatry, [no vol.]: [no pages] |
|
GSE146526 |
| Ikiz, Burcin et al. (2015) The Regulatory Machinery of Neurodegeneration in In Vitro Models of Amyotrophic Lateral Sclerosis.; Cell Rep, 12: 335-45 |
|
GSE49023 |
| Ikonomou, Laertis et al. (2020) The in vivo genetic program of murine primordial lung epithelial progenitors.; Nat Commun, 11: 635 |
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GSE138903 |
| Ikram, Fakhera et al. (2016) Transcription factor activating protein 2 beta (TFAP2B) mediates noradrenergic neuronal differentiation in neuroblastoma.; Mol Oncol, 10: 344-59 |
|
GSE74350 |
| Ikushima, Hiroyuki et al. (2023) Effects of zinc deficiency on the regeneration of olfactory epithelium in mice.; Chem Senses, 48: [no pages] |
|
GSE225753 |
| Ilott, Nicholas E et al. (2014) Long-term effects of gestational nicotine exposure and food-restriction on gene expression in the striatum of adolescent rats.; PLoS One, 9: e88896 |
|
GSE50607 |
| Ilık, İbrahim Avşar et al. (2024) Autonomous transposons tune their sequences to ensure somatic suppression.; Nature, 626: 1116-1124 |
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GSE244708 GSE223257 GSE223261 GSE223254 GSE244711 |
| Im, Eun-Ju et al. (2019) Sulfisoxazole inhibits the secretion of small extracellular vesicles by targeting the endothelin receptor A.; Nat Commun, 10: 1387 |
|
GSE117991 |
| Imada, Shinya et al. (2010) Hypothermia-induced increase of oligodendrocyte precursor cells: Possible involvement of plasmalemmal voltage-dependent anion channel 1.; J Neurosci Res, 88: 3457-66 |
|
GSE20645 |
| Imadome, Kaori et al. (2008) Upregulation of stress-response genes with cell cycle arrest induced by carbon ion irradiation in multiple murine tumors models.; Cancer Biol Ther, 7: 208-17 |
|
GSE11629 |
| Imadome, Kaori et al. (2010) Subtypes of cervical adenosquamous carcinomas classified by EpCAM expression related to radiosensitivity.; Cancer Biol Ther, 10: 1019-26 |
|
GSE20167 |
| Imaizumi, Kent et al. (2018) Rostrocaudal Areal Patterning of Human PSC-Derived Cortical Neurons by FGF8 Signaling.; eNeuro, 5: [no pages] |
|
GSE111106 |
| Imaizumi, Kent et al. (2022) Pathogenic Mutation of TDP-43 Impairs RNA Processing in a Cell Type-Specific Manner: Implications for the Pathogenesis of ALS/FTLD.; eNeuro, 9: [no pages] |
|
GSE196144 |
| Imaoka, Tatsuhiko et al. (2014) Molecular characterization of cancer reveals interactions between ionizing radiation and chemicals on rat mammary carcinogenesis.; Int J Cancer, 134: 1529-38 |
|
GSE44786 |
| Imaz-Iruretagoyena, Josune et al. (2025) RNA-binding protein IMP1/ZBP1 directs local translation in microglial processes to regulate motility and phagocytosis during inflammation.; PLoS Biol, 23: e3003463 |
|
GSE300100 |
| Inaba, Hiromichi et al. (2023) GPCR-mediated calcium and cAMP signaling determines psychosocial stress susceptibility and resiliency.; Sci Adv, 9: eade5397 |
|
GSE207854 |
| Inaguma, Shingo et al. (2015) Addiction of pancreatic cancer cells to zinc-finger transcription factor ZIC2.; Oncotarget, 6: 28257-68 |
|
GSE39704 |
| Inak, Gizem et al. (2021) Defective metabolic programming impairs early neuronal morphogenesis in neural cultures and an organoid model of Leigh syndrome.; Nat Commun, 12: 1929 |
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GSE126359 GSE134453 |
| Inberg, Sharon et al. (2016) Fluid consumption and taste novelty determines transcription temporal dynamics in the gustatory cortex.; Mol Brain, 9: 13 |
|
GSE74546 |
| Ince, Tan A et al. (2007) Transformation of different human breast epithelial cell types leads to distinct tumor phenotypes.; Cancer Cell, 12: 160-70 |
|
GSE6885 |
| Ince-Dunn, Gulayse et al. (2012) Neuronal Elav-like (Hu) proteins regulate RNA splicing and abundance to control glutamate levels and neuronal excitability.; Neuron, 75: 1067-80 |
|
GSE43287 |
| Indino, Serena et al. (2022) The Educational Program of Macrophages toward a Hyperprogressive Disease-Related Phenotype Is Orchestrated by Tumor-Derived Extracellular Vesicles.; Int J Mol Sci, 23: [no pages] |
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GSE210340 GSE210547 |
| Indraccolo, Stefano et al. (2007) Identification of genes selectively regulated by IFNs in endothelial cells.; J Immunol, 178: 1122-35 |
|
GSE3920 |
| Infante-Tadeo, Sonia et al. (2025) Patient-derived induced pluripotent stem cells with a C9orf72 expansion as a model to study frontotemporal dementia pathologies.; Mol Biol Cell, 36: ar145 |
|
GSE273025 |
| Ing, Nancy H et al. (2014) Marinobufagenin regulates permeability and gene expression of brain endothelial cells.; Am J Physiol Regul Integr Comp Physiol, 306: R918-24 |
|
GSE51351 |
| Ingiosi, Ashley M et al. (2019) Shank3 modulates sleep and expression of circadian transcription factors.; Elife, 8: [no pages] |
|
GSE113754 |