List of all 21,933 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Inglis, George Andrew S et al. (2020) Transcriptomic and epigenomic dynamics associated with development of human iPSC-derived GABAergic interneurons.; Hum Mol Genet, 29: 2579-2595 |
|
GSE145073 |
| Inglis, Hayley R et al. (2012) Gene expression in the spinal cord in female lewis rats with experimental autoimmune encephalomyelitis induced with myelin basic protein.; PLoS One, 7: e48555 |
|
GSE39119 |
| Ingolfsland, Ellen C et al. (2024) Phlebotomy-induced anemia reduces oxygen-induced retinopathy severity and dampens retinal developmental transcriptomic pathways in rats.; Pediatr Res, [no vol.]: [no pages] |
|
GSE272252 |
| Ingram, Jennifer L et al. (2007) Genomic analysis of human lung fibroblasts exposed to vanadium pentoxide to identify candidate genes for occupational bronchitis.; Respir Res, 8: 34 |
|
GSE5339 |
| Ingram, Melissa et al. (2016) Cerebellar Transcriptome Profiles of ATXN1 Transgenic Mice Reveal SCA1 Disease Progression and Protection Pathways.; Neuron, 89: 1194-1207 |
|
GSE75778 |
| Inia, José A et al. (2023) Semaglutide Has Beneficial Effects on Non-Alcoholic Steatohepatitis in Ldlr-/-.Leiden Mice.; Int J Mol Sci, 24: [no pages] |
|
GSE226496 |
| Iniguez, Amanda Balboni et al. (2018) Resistance to Epigenetic-Targeted Therapy Engenders Tumor Cell Vulnerabilities Associated with Enhancer Remodeling.; Cancer Cell, 34: 922-938.e7 |
|
GSE107707 |
| Innamarato, Patrick et al. (2020) Reactive Myelopoiesis Triggered by Lymphodepleting Chemotherapy Limits the Efficacy of Adoptive T Cell Therapy.; Mol Ther, 28: 2252-2270 |
|
GSE136639 |
| Innocenti, Federico et al. (2011) Identification, replication, and functional fine-mapping of expression quantitative trait loci in primary human liver tissue.; PLoS Genet, 7: e1002078 |
|
GSE28893 |
| Ino, Yuka et al. (2023) TSLP in DRG neurons causes the development of neuropathic pain through T cells.; J Neuroinflammation, 20: 200 |
|
GSE237869 |
| Inoue, Akira et al. (2021) A genetic mouse model with postnatalNf1andp53loss recapitulates the histology and transcriptome of human malignant peripheral nerve sheath tumor.; Neurooncol Adv, 3: vdab129 |
|
GSE172221.2 GSE172221.1 |
| Inoue, Fumitaka et al. (2019) Genomic and epigenomic mapping of leptin-responsive neuronal populations involved in body weight regulation.; Nat Metab, 1: 475-484 |
|
GSE112125 |
| Inoue, Fumitaka et al. (2019) Identification and Massively Parallel Characterization of Regulatory Elements Driving Neural Induction.; Cell Stem Cell, 25: 713-727.e10 |
|
GSE134678 GSE115045 |
| Inoue, Kimiko et al. (2010) Impeding Xist expression from the active X chromosome improves mouse somatic cell nuclear transfer.; Science, 330: 496-9 |
|
GSE23181 |
| Inoue, Kimiko et al. (2015) Trichostatin A specifically improves the aberrant expression of transcription factor genes in embryos produced by somatic cell nuclear transfer.; Sci Rep, 5: 10127 |
|
GSE63886 |
| Inoue, Masahiro et al. (2015) Gene-expression profiles correlate with the efficacy of anti-EGFR therapy and chemotherapy for colorectal cancer.; Int J Clin Oncol, 20: 1147-55 |
|
GSE33193 |
| Inoue, Ryo et al. (2016) A preliminary investigation on the relationship between gut microbiota and gene expressions in peripheral mononuclear cells of infants with autism spectrum disorders.; Biosci Biotechnol Biochem, 80: 2450-2458 |
|
GSE77103 |
| Inoue, Yusuke et al. (2021) Extracellular signal-regulated kinase mediates chromatin rewiring and lineage transformation in lung cancer.; Elife, 10: [no pages] |
|
GSE160482 |
| Inskeep, Katherine A et al. (2024) SMPD4-mediated sphingolipid metabolism regulates brain and primary cilia development.; Development, 151: [no pages] |
|
GSE250472 |
| Intisar, Aseer et al. (2022) An electroceutical approach enhances myelination via upregulation of lipid biosynthesis in the dorsal root ganglion.; Biofabrication, 14: [no pages] |
|
GSE190745 |
| Ioannidis, Ioannis et al. (2012) Plasticity and virus specificity of the airway epithelial cell immune response during respiratory virus infection.; J Virol, 86: 5422-36 |
|
GSE32137 |
| Ioannidis, Valentin et al. (2023) Disrupted extracellular matrix and cell cycle genes in autism-associated Shank3 deficiency are targeted by lithium.; Mol Psychiatry, [no vol.]: [no pages] |
|
GSE248859 |
| Ioannou, Maria S et al. (2019) Neuron-Astrocyte Metabolic Coupling Protects against Activity-Induced Fatty Acid Toxicity.; Cell, 177: 1522-1535.e14 |
|
GSE128973 |
| Iorgulescu, J Bryan et al. (2022) Antigen presentation deficiency, mesenchymal differentiation, and resistance to immunotherapy in the murine syngeneic CT2A tumor model.; Front Immunol, 14: 1297932 |
|
GSE215123.2 |
| Iorio, Egidio et al. (2010) Activation of phosphatidylcholine cycle enzymes in human epithelial ovarian cancer cells.; Cancer Res, 70: 2126-35 |
|
GSE19352 |
| Iorio, Francesco et al. (2010) Discovery of drug mode of action and drug repositioning from transcriptional responses.; Proc Natl Acad Sci U S A, 107: 14621-6 |
|
GSE18552 |
| Iovino, Margaud et al. (2023) Novel XBP1s-independent function of IRE1 RNase in HIF-1α-mediated glycolysis upregulation in human macrophages upon stimulation with LPS or saturated fatty acid.; Front Immunol, 14: 1204126 |
|
GSE233446 |
| Iqbal, J et al. (2011) Natural killer cell lymphoma shares strikingly similar molecular features with a group of non-hepatosplenic ?? T-cell lymphoma and is highly sensitive to a novel aurora kinase A inhibitor in vitro.; Leukemia, 25: 348-58 |
|
GSE19067 |
| Iqbal, Javeed et al. (2010) Molecular signatures to improve diagnosis in peripheral T-cell lymphoma and prognostication in angioimmunoblastic T-cell lymphoma.; Blood, 115: 1026-36 |
|
GSE19069 |
| Iqbal, Javeed et al. (2014) Gene expression signatures delineate biological and prognostic subgroups in peripheral T-cell lymphoma.; Blood, 123: 2915-23 |
|
GSE58445 |
| Iqbal, Mohamed Ariff et al. (2024) The integrated stress response promotes neural stem cell survival under conditions of mitochondrial dysfunction in neurodegeneration.; Aging Cell, 23: e14165 |
|
GSE233464 |
| Iradi, M Carolina Gallego et al. (2018) Characterization of gene regulation and protein interaction networks for Matrin 3 encoding mutations linked to amyotrophic lateral sclerosis and myopathy.; Sci Rep, 8: 4049 |
|
GSE110492 |
| Iram, Tal et al. (2022) Young CSF restores oligodendrogenesis and memory in aged mice via Fgf17.; Nature, 605: 509-515 |
|
GSE198008.1 |
| Iram, Tal et al. (2024) SRF transcriptionally regulates the oligodendrocyte cytoskeleton during CNS myelination.; Proc Natl Acad Sci U S A, 121: e2307250121 |
|
GSE241560 |
| Irie, Naoki et al. (2011) Comparative transcriptome analysis reveals vertebrate phylotypic period during organogenesis.; Nat Commun, 2: 248 |
|
GSE28389 |
| Irie, Naoko et al. (2023) DMRT1 regulates human germline commitment.; Nat Cell Biol, 25: 1439-1452 |
|
GSE190724 |
| Irizar, Haritz et al. (2014) Transcriptomic profile reveals gender-specific molecular mechanisms driving multiple sclerosis progression.; PLoS One, 9: e90482 |
|
GSE41890 |
| Irizarry, Rafael A et al. (2009) The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores.; Nat Genet, 41: 178-86 |
|
GSE13471 |
| Irmady, Krithi et al. (2023) Blood transcriptomic signatures associated with molecular changes in the brain and clinical outcomes in Parkinson's disease.; Nat Commun, 14: 3956 |
|
GSE205450 |
| Irmak, Dilber et al. (2018) Mechanism suppressing H3K9 trimethylation in pluripotent stem cells and its demise by polyQ-expanded huntingtin mutations.; Hum Mol Genet, 27: 4117-4134 |
|
GSE118325 |
| Irmer, Barnabas et al. (2025) Consensus molecular subtyping of colorectal carcinoma brain metastases reveals a metabolic signature associated with poor patient survival.; Mol Oncol, 19: 614-634 |
|
GSE243188 |
| Irmler, Martin et al. (2012) Long-term proteasomal inhibition in transgenic mice by UBB(+1) expression results in dysfunction of central respiration control reminiscent of brainstem neuropathology in Alzheimer patients.; Acta Neuropathol, 124: 187-97 |
|
GSE13691.1 GSE13691.2 |
| Iruretagoyena, J I et al. (2014) Metabolic gene profile in early human fetal heart development.; Mol Hum Reprod, 20: 690-700 |
|
GSE56048 |
| Irvin, Dwain K et al. (2010) T cells enhance stem-like properties and conditional malignancy in gliomas.; PLoS One, 5: e10974 |
|
GSE11100 |
| Irvine, Katharine M et al. (2012) Peripheral blood monocyte gene expression profile clinically stratifies patients with recent-onset type 1 diabetes.; Diabetes, 61: 1281-90 |
|
GSE33440 |
| Isaac, J et al. (2014) DLX3 regulates bone mass by targeting genes supporting osteoblast differentiation and mineral homeostasis in vivo.; Cell Death Differ, 21: 1365-76 |
|
GSE53105 |
| Isbel, Luke et al. (2016) Wiz binds active promoters and CTCF-binding sites and is required for normal behaviour in the mouse.; Elife, 5: [no pages] |
|
GSE76909 |
| Isbell, Lisa Kristina et al. (2023) Patient-derived xenograft mouse models to investigate tropism to the central nervous system and retina of primary and secondary central nervous system lymphoma.; Neuropathol Appl Neurobiol, 49: e12899 |
|
GSE218284 GSE189822 |
| Ise, Masataka et al. (2025) An inducible oligodendrocyte dysfunction triggered a pathological cascade of massive microglial activation and neurodegeneration.; Neurobiol Dis, 216: 107142 |
|
GSE288387 |
| Iseki, Hiroyoshi et al. (2016) Combined Overexpression of JARID2, PRDM14, ESRRB, and SALL4A Dramatically Improves Efficiency and Kinetics of Reprogramming to Induced Pluripotent Stem Cells.; Stem Cells, 34: 322-33 |
|
GSE52200 |
| Isensee, Jörg et al. (2014) Subgroup-elimination transcriptomics identifies signaling proteins that define subclasses of TRPV1-positive neurons and a novel paracrine circuit.; PLoS One, 9: e115731 |
|
GSE59727 |
| Isern, Joan et al. (2011) Single-lineage transcriptome analysis reveals key regulatory pathways in primitive erythroid progenitors in the mouse embryo.; Blood, 117: 4924-34 |
|
GSE24127 |
| Isern, Joan et al. (2014) The neural crest is a source of mesenchymal stem cells with specialized hematopoietic stem cell niche function.; Elife, 3: e03696 |
|
GSE61695 |
| Isganaitis, Elvira et al. (2009) Accelerated postnatal growth increases lipogenic gene expression and adipocyte size in low-birth weight mice.; Diabetes, 58: 1192-200 |
|
GSE16083 |
| Ishak, Charles A et al. (2025) Chronic Viral Mimicry Induction following p53 Loss Promotes Immune Evasion.; Cancer Discov, 15: 793-817 |
|
GSE216639 GSE216941 |
| Ishibashi, Kojiro et al. (2024) Astrocyte-induced mGluR1 activates human lung cancer brain metastasis via glutamate-dependent stabilization of EGFR.; Dev Cell, 59: 579-594.e6 |
|
GSE241716 |
| Ishibashi, Tomoko et al. (2009) Leukemia inhibitory factor regulates the timing of oligodendrocyte development and myelination in the postnatal optic nerve.; J Neurosci Res, 87: 3343-55 |
|
GSE11935 |
| Ishida, Yoshihito et al. (2016) Vulnerability of Purkinje Cells Generated from Spinocerebellar Ataxia Type 6 Patient-Derived iPSCs.; Cell Rep, 17: 1482-1490 |
|
GSE85347 GSE85348 |
| Ishigaki, Shinsuke et al. (2012) Position-dependent FUS-RNA interactions regulate alternative splicing events and transcriptions.; Sci Rep, 2: 529 |
|
GSE36153 |
| Ishiguro, Naoki et al. (2023) Improvement of Protein Expression Profile in Three-Dimensional Renal Proximal Tubular Epithelial Cell Spheroids Selected Based on OAT1 Gene Expression: A Potential In Vitro Tool for Evaluating Human Renal Proximal Tubular Toxicity and Drug Disposition.; Drug Metab Dispos, 51: 1177-1187 |
|
GSE216153 |
| Ishihara, Keiichi et al. (2020) Perturbation of the immune cells and prenatal neurogenesis by the triplication of the Erg gene in mouse models of Down syndrome.; Brain Pathol, 30: 75-91 |
|
GSE121449 |
| Ishihara, Keisuke et al. (2023) Topological morphogenesis of neuroepithelial organoids.; Nat Phys, 19: 177-183 |
|
GSE214368 |
| Ishii, Taisuke et al. (2022) Effect of M2-like macrophages of the injured-kidney cortex on kidney cancer progression.; Cell Death Discov, 8: 480 |
|
GSE197494 |
| Ishii, Takaya et al. (2019) In VitroModeling of the Bipolar Disorder and Schizophrenia Using Patient-Derived Induced Pluripotent Stem Cells with Copy Number Variations ofPCDH15 andRELN.; eNeuro, 6: [no pages] |
|
GSE116820 |
| Ishikawa, Keijiro et al. (2010) Gene expression profile of hyperoxic and hypoxic retinas in a mouse model of oxygen-induced retinopathy.; Invest Ophthalmol Vis Sci, 51: 4307-19 |
|
GSE19886 |
| Ishikawa, Keijiro et al. (2014) Periostin promotes the generation of fibrous membranes in proliferative vitreoretinopathy.; FASEB J, 28: 131-42 |
|
GSE41019 |
| Ishikura, Teruyuki et al. (2021) Anti-AQP4 autoantibodies promote ATP release from astrocytes and induce mechanical pain in rats.; J Neuroinflammation, 18: 181 |
|
GSE150598 |
| Ishimura, Ryuta et al. (2014) RNA function. Ribosome stalling induced by mutation of a CNS-specific tRNA causes neurodegeneration.; Science, 345: 455-9 |
|
GSE56127 |
| Ishimura, Ryuta et al. (2016) Activation of GCN2 kinase by ribosome stalling links translation elongation with translation initiation.; Elife, 5: [no pages] |
|
GSE79926 GSE79929 |
| Ishiwata, Junya et al. (2012) State of heat shock factor 1 expression as a putative diagnostic marker for oral squamous cell carcinoma.; Int J Oncol, 40: 47-52 |
|
GSE38058 |
| Isidro-Hernández, Marta et al. (2020) Inhibition of inflammatory signaling in Pax5 mutant cells mitigates B-cell leukemogenesis.; Sci Rep, 10: 19189 |
|
GSE154589 |
| Isidro-Hernández, Marta et al. (2023) Immune stress suppresses innate immune signaling in preleukemic precursor B-cells to provoke leukemia in predisposed mice.; Nat Commun, 14: 5159 |
|
GSE221597 |
| Iskusnykh, Igor Y et al. (2023) Lmx1a is a master regulator of the cortical hem.; Elife, 12: [no pages] |
|
GSE216165 |
| Islam, Aminul et al. (2013) An exploration of heat tolerance in mice utilizing mRNA and microRNA expression analysis.; PLoS One, 8: e72258 |
|
GSE48269 |
| Islam, Maliha et al. (2023) Role of caveolin-1 in metabolic programming of fetal brain.; iScience, 26: 107710 |
|
GSE215139 |
| Islam, Maliha et al. (2024) Ablation of placental REST deregulates fetal brain metabolism and impacts gene expression of the offspring brain at the postnatal and adult stages.; FASEB J, 38: e23349 |
|
GSE236711 |
| Islam, Maliha et al. (2024) Molecular Regulation of Fetal Brain Development in Inbred and Congenic Mouse Strains Differing in Longevity.; Genes (Basel), 15: [no pages] |
|
GSE252079 |
| Islam, Md Rezaul et al. (2021) A microRNA signature that correlates with cognition and is a target against cognitive decline.; EMBO Mol Med, 13: e13659 |
|
GSE153109 GSE153110 GSE153105 GSE153107 GSE153106 GSE153112 |
| Islam, Md Rezaul et al. (2021) Epigenetic gene expression links heart failure to memory impairment.; EMBO Mol Med, 13: e11900 |
|
GSE159442 GSE159445 GSE159446 GSE159441 GSE159443 |
| Islam, Mohammad R et al. (2021) Exercise hormone irisin is a critical regulator of cognitive function.; Nat Metab, 3: 1058-1070 |
|
GSE174210 GSE179078 |
| Islam, Rafiad et al. (2024) Early adversity causes sex-specific deficits in perforant pathway connectivity and contextual memory in adolescent mice.; Biol Sex Differ, 15: 39 |
|
GSE142305 |
| Ismail, Noura et al. (2013) Macrophage microvesicles induce macrophage differentiation and miR-223 transfer.; Blood, 121: 984-95 |
|
GSE41889 |
| Isoda, Miho et al. (2016) Robust production of human neural cells by establishing neuroepithelial-like stem cells from peripheral blood mononuclear cell-derived feeder-free iPSCs under xeno-free conditions.; Neurosci Res, 110: 18-28 |
|
GSE76900 |