List of all 21,933 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Jacob Berger, Adi et al. (2021) IRS1 phosphorylation underlies the non-stochastic probability of cancer cells to persist during EGFR inhibition therapy.; Nat Cancer, 2: 1055-1070 |
|
GSE178975 |
| Jacob, Aishwarya G et al. (2024) RNA binding protein with multiple splicing (RBPMS) promotes contractile phenotype splicing in human embryonic stem cell-derived vascular smooth muscle cells.; Cardiovasc Res, 120: 2104-2116 |
|
GSE153614 |
| Jacob, Anne et al. (2018) The transcription factor prospero homeobox protein 1 is a direct target of SoxC proteins during developmental vertebrate neurogenesis.; J Neurochem, 146: 251-268 |
|
GSE106788.1 |
| Jacob, Claire et al. (2011) HDAC1 and HDAC2 control the transcriptional program of myelination and the survival of Schwann cells.; Nat Neurosci, 14: 429-36 |
|
GSE27451 |
| Jacobs, Aaron T et al. (2009) HSF1-mediated BAG3 expression attenuates apoptosis in 4-hydroxynonenal-treated colon cancer cells via stabilization of anti-apoptotic Bcl-2 proteins.; J Biol Chem, 284: 9176-83 |
|
GSE12762 |
| Jacobs, Jonathan P et al. (2010) Deficiency of CXCR2, but not other chemokine receptors, attenuates autoantibody-mediated arthritis in a murine model.; Arthritis Rheum, 62: 1921-32 |
|
GSE27492 |
| Jacobsen, Jessie C et al. (2011) HD CAG-correlated gene expression changes support a simple dominant gain of function.; Hum Mol Genet, 20: 2846-60 |
|
GSE26001 |
| Jacobsen, Julie Mie et al. (2025) CagriSema drives weight loss in rats by reducing energy intake and preserving energy expenditure.; Nat Metab, 7: 1322-1329 |
|
GSE295272 |
| Jacobson, Jeffrey M et al. (2016) The Effect of Chloroquine on Immune Activation and Interferon Signatures Associated with HIV-1.; AIDS Res Hum Retroviruses, 32: 636-47 |
|
GSE71063 GSE71064 |
| Jacoby, M A et al. (2014) The DNA double-strand break response is abnormal in myeloblasts from patients with therapy-related acute myeloid leukemia.; Leukemia, 28: 1242-51 |
|
GSE52478 |
| Jacovetti, Cecile et al. (2024) The mitochondrial tRNA-derived fragment, mt-tRF-LeuTAA, couples mitochondrial metabolism to insulin secretion.; Mol Metab, 84: 101955 |
|
GSE240395 |
| Jacquet, Benoit V et al. (2009) FoxJ1-dependent gene expression is required for differentiation of radial glia into ependymal cells and a subset of astrocytes in the postnatal brain.; Development, 136: 4021-31 |
|
GSE18678 |
| Jaensch, Elizabeth S et al. (2021) A Polycomb domain found in committed cells impairs differentiation when introduced into PRC1 in pluripotent cells.; Mol Cell, [no vol.]: [no pages] |
|
GSE151900 |
| Jafari, Hedieh et al. (2025) The Novel Immunocompetent Eµ-SOX11CCND1 Mouse Model Phenotypically and Molecularly Resembles Human Mantle Cell Lymphoma.; Clin Cancer Res, 31: 4571-4585 |
|
GSE281125 |
| Jafari, Mehrnoosh et al. (2021) Phagocyte-mediated synapse removal in cortical neuroinflammation is promoted by local calcium accumulation.; Nat Neurosci, 24: 355-367 |
|
GSE161654 |
| Jaffe, A E et al. (2014) Genetic neuropathology of obsessive psychiatric syndromes.; Transl Psychiatry, 4: e432 |
|
GSE60190 |
| Jagani, Zainab et al. (2010) The Polycomb group protein Bmi-1 is essential for the growth of multiple myeloma cells.; Cancer Res, 70: 5528-38 |
|
GSE21912 |
| Jager, Sara E et al. (2020) Changes in the transcriptional fingerprint of satellite glial cells following peripheral nerve injury.; Glia, 68: 1375-1395 |
|
GSE120284 |
| Jagger, B W et al. (2012) An overlapping protein-coding region in influenza A virus segment 3 modulates the host response.; Science, 337: 199-204 |
|
GSE38112 |
| Jagst, Michelle et al. (2024) Modeling extrahepatic hepatitis E virus infection in induced human primary neurons.; Proc Natl Acad Sci U S A, 121: e2411434121 |
|
GSE274780 |
| Jahn, Denise et al. (2024) Increased β2-adrenergic signaling promotes fracture healing through callus neovascularization in mice.; Sci Transl Med, 16: eadk9129 |
|
GSE253133 |
| Jaillard, Céline et al. (2012) Nxnl2 splicing results in dual functions in neuronal cell survival and maintenance of cell integrity.; Hum Mol Genet, 21: 2298-311 |
|
GSE21863 |
| Jailwala, Parthav et al. (2009) Apoptosis of CD4+ CD25(high) T cells in type 1 diabetes may be partially mediated by IL-2 deprivation.; PLoS One, 4: e6527 |
|
GSE10586 |
| Jaime, Olga G et al. (2023) SIX1+PAX3+ identify a progenitor for myogenic lineage commitment from hPSCs.; Development, 150: [no pages] |
|
GSE234616 |
| Jain, Aditi et al. (2022) HuR Plays a Role in Double-Strand Break Repair in Pancreatic Cancer Cells and Regulates Functional BRCA1-Associated-Ring-Domain-1(BARD1) Isoforms.; Cancers (Basel), 14: [no pages] |
|
GSE166951 |
| Jain, Naveen et al. (2024) Retrospective identification of cell-intrinsic factors that mark pluripotency potential in rare somatic cells.; Cell Syst, 15: 109-133.e10 |
|
GSE243933 |
| Jain, Priyanka et al. (2013) Systems biology approach reveals genome to phenome correlation in type 2 diabetes.; PLoS One, 8: e53522 |
|
GSE29221 GSE29226 GSE29231 |
| Jain, Renu N et al. (2007) Transcriptional profiling of gastrin-regulated genes in mouse stomach.; Physiol Genomics, 29: 1-12 |
|
GSE4810 |
| Jain, Saumey et al. (2024) On-Chip Neural Induction Boosts Neural Stem Cell Commitment: Toward a Pipeline for iPSC-Based Therapies.; Adv Sci (Weinh), [no vol.]: e2401859 |
|
GSE255748 |
| Jain, Shilpa et al. (2013) Expression of regulatory platelet microRNAs in patients with sickle cell disease.; PLoS One, 8: e60932 |
|
GSE41573 |
| Jain, Siddhant U et al. (2020) Histone H3.3 G34 mutations promote aberrant PRC2 activity and drive tumor progression.; Proc Natl Acad Sci U S A, 117: 27354-27364 |
|
GSE133721 |
| Jais, Alexander et al. (2020) PNOCARCNeurons Promote Hyperphagia and Obesity upon High-Fat-Diet Feeding.; Neuron, 106: 1009-1025.e10 |
|
GSE137737 |
| Jaisil, Pongrat et al. (2025) Dietary and exercise interventions improve cognition and alter hippocampal transcriptomics in a mouse model of the metabolic syndrome.; Exp Neurol, 395: 115483 |
|
GSE283691 |
| Jaitin, Diego Adhemar et al. (2014) Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.; Science, 343: 776-9 |
|
GSE54006 |
| Jaitner, Clemens et al. (2016) Satb2 determines miRNA expression and long-term memory in the adult central nervous system.; Elife, 5: [no pages] |
|
GSE77005 |
| Jaka, Oihane et al. (2012) C3KO mouse expression analysis: downregulation of the muscular dystrophy Ky protein and alterations in muscle aging.; Neurogenetics, 13: 347-57 |
|
GSE33931 |
| Jakovcevski, Mira et al. (2015) Neuronal Kmt2a/Mll1 histone methyltransferase is essential for prefrontal synaptic plasticity and working memory.; J Neurosci, 35: 5097-108 |
|
GSE87675 |
| Jakubison, Brad L et al. (2018) Induced PTF1a expression in pancreatic ductal adenocarcinoma cells activates acinar gene networks, reduces tumorigenic properties, and sensitizes cells to gemcitabine treatment.; Mol Oncol, 12: 1104-1124 |
|
GSE106290 |
| Jakubison, Brad L et al. (2022) ID2 and HIF-1α collaborate to protect quiescent hematopoietic stem cells from activation, differentiation, and exhaustion.; J Clin Invest, 132: [no pages] |
|
GSE203076 |
| Jakwerth, Constanze A et al. (2022) Early reduction of SARS-CoV-2-replication in bronchial epithelium by kinin B2receptor antagonism.; J Mol Med (Berl), 100: 613-627 |
|
GSE176405 |
| Jamay, Théo et al. (2025) Characterization of POP mixture redistribution and identification of their molecular signature in xenografted fat mice.; Environ Pollut, 374: 126239 |
|
GSE279353 |
| Jambusaria, Ankit et al. (2020) Endothelial heterogeneity across distinct vascular beds during homeostasis and inflammation.; Elife, 9: [no pages] |
|
GSE136848 |
| James, Claudine G et al. (2007) Expression profiling of Dexamethasone-treated primary chondrocytes identifies targets of glucocorticoid signalling in endochondral bone development.; BMC Genomics, 8: 205 |
|
GSE7683 |
| James, Claudine G et al. (2010) Genome-wide analyses of gene expression during mouse endochondral ossification.; PLoS One, 5: e8693 |
|
GSE7685 |
| Jameson, Samantha A et al. (2012) Temporal transcriptional profiling of somatic and germ cells reveals biased lineage priming of sexual fate in the fetal mouse gonad.; PLoS Genet, 8: e1002575 |
|
GSE27715 |
| Jan, Maxime et al. (2024) Model integration of circadian- and sleep-wake-driven contributions to rhythmic gene expression reveals distinct regulatory principles.; Cell Syst, 15: 610-627.e8 |
|
GSE262410 |
| Jan, Michael et al. (2021) Molecular processes mediating hyperhomocysteinemia-induced metabolic reprogramming, redox regulation and growth inhibition in endothelial cells.; Redox Biol, 45: 102018 |
|
GSE175735 |
| Jana, Arundhati et al. (2022) Increased Type I interferon signaling and brain endothelial barrier dysfunction in an experimental model of Alzheimer's disease.; Sci Rep, 12: 16488 |
|
GSE206629 |
| Janardhan, Harish Palleti et al. (2020) KRAS or BRAF mutations cause hepatic vascular cavernomas treatable with MAP2K-MAPK1 inhibition.; J Exp Med, 217: [no pages] |
|
GSE147848 |
| Janas, Justyna A et al. (2022) Tip60-mediated H2A.Z acetylation promotes neuronal fate specification and bivalent gene activation.; Mol Cell, 82: 4627-4646.e14 |
|
GSE181887 |
| Jancic, Dragana et al. (2009) Inhibition of cAMP response element-binding protein reduces neuronal excitability and plasticity, and triggers neurodegeneration.; Cereb Cortex, 19: 2535-47 |
|
GSE14320 |
| Jane-Wit, Dan et al. (2013) Alloantibody and complement promote T cell-mediated cardiac allograft vasculopathy through noncanonical nuclear factor-?B signaling in endothelial cells.; Circulation, 128: 2504-16 |
|
GSE50112 |
| Jang, Christopher et al. (2015) Ribosome profiling reveals an important role for translational control in circadian gene expression.; Genome Res, 25: 1836-47 |
|
GSE56924 |
| Jang, Eun-Hae et al. (2021) Comparing axon regeneration in male and female mice after peripheral nerve injury.; J Neurosci Res, 99: 2874-2887 |
|
GSE172064 |
| Jang, H Josh et al. (2024) Epigenetic therapy potentiates transposable element transcription to create tumor-enriched antigens in glioblastoma cells.; Nat Genet, 56: 1903-1913 |
|
GSE227059 |
| Jang, Jessica C et al. (2015) Macrophage-derived human resistin is induced in multiple helminth infections and promotes inflammatory monocytes and increased parasite burden.; PLoS Pathog, 11: e1004579 |
|
GSE60537 |
| Jang, Jiho et al. (2016) 25-hydroxycholesterol contributes to cerebral inflammation of X-linked adrenoleukodystrophy through activation of the NLRP3 inflammasome.; Nat Commun, 7: 13129 |
|
GSE85804 |
| Jang, Minjeong et al. (2025) Hypoglycemia induces brain metabolic reprogramming and neurodegeneration via serum response factor and myocardin-related transcription factor-A.; Signal Transduct Target Ther, 10: 412 |
|
GSE308305 |
| Jang, Won-Jun et al. (2020) Transcriptional Profiling of Whisker Follicles and of the Striatum in Methamphetamine Self-Administered Rats.; Int J Mol Sci, 21: [no pages] |
|
GSE157112 |
| Jang, Won-Jun et al. (2023) Identification of Potential Biomarkers for Diagnosis of Patients with Methamphetamine Use Disorder.; Int J Mol Sci, 24: [no pages] |
|
GSE227204 |
| Jang, Yoonjeong et al. (2025) BCL11A-deficient human erythropoiesis is impaired in vitro and after xenotransplantation into mice.; Blood Adv, 9: 2722-2732 |
|
GSE283795 |
| Jangi, Mohini et al. (2017) SMN deficiency in severe models of spinal muscular atrophy causes widespread intron retention and DNA damage.; Proc Natl Acad Sci U S A, 114: E2347-E2356 |
|
GSE87281.2 GSE87281.1 |
| Janich, Peggy et al. (2011) The circadian molecular clock creates epidermal stem cell heterogeneity.; Nature, 480: 209-14 |
|
GSE27079 |
| Janich, Peggy et al. (2015) Ribosome profiling reveals the rhythmic liver translatome and circadian clock regulation by upstream open reading frames.; Genome Res, 25: 1848-59 |
|
GSE67305 |
| Janjanam, Jagadeesh et al. (2018) LIM and cysteine-rich domains 1 is required for thrombin-induced smooth muscle cell proliferation and promotes atherogenesis.; J Biol Chem, 293: 3088-3103 |
|
GSE104498 |
| Janoudi, Tusneem et al. (2025) Nonclinical evaluation of HBG1/2 and BCL11A as genome-editing targets for the treatment of β-hemoglobinopathies.; Blood Adv, 9: 808-813 |
|
GSE264491 |
| Janoueix-Lerosey, Isabelle et al. (2008) Somatic and germline activating mutations of the ALK kinase receptor in neuroblastoma.; Nature, 455: 967-70 |
|
GSE12460 |
| Janova, Hana et al. (2016) CD14 is a key organizer of microglial responses to CNS infection and injury.; Glia, 64: 635-49 |
|
GSE62641 |
| Janova, Hana et al. (2024) West Nile virus triggers intestinal dysmotility via T cell-mediated enteric nervous system injury.; J Clin Invest, [no vol.]: [no pages] |
|
GSE264415 |
| Jans, Anneke et al. (2012) PUFAs acutely affect triacylglycerol-derived skeletal muscle fatty acid uptake and increase postprandial insulin sensitivity.; Am J Clin Nutr, [no vol.]: [no pages] |
|
GSE31901 |
| Jansa, Petr et al. (2014) Dosage compensation of an aneuploid genome in mouse spermatogenic cells.; Biol Reprod, 90: 124 |
|
GSE54683 |
| Jansen, Kathrin et al. (2021) RBFOX splicing factors contribute to a broad but selective recapitulation of peripheral tissue splicing patterns in the thymus.; Genome Res, 31: 2022-2034 |
|
GSE145930 GSE145913 |
| Jansen, Louis et al. (2015) An intrahepatic transcriptional signature of enhanced immune activity predicts response to peginterferon in chronic hepatitis B.; Liver Int, 35: 1824-32 |
|
GSE54747 |
| Jansen, Robert S et al. (2015) ATP-binding Cassette Subfamily C Member 5 (ABCC5) Functions as an Efflux Transporter of Glutamate Conjugates and Analogs.; J Biol Chem, 290: 30429-40 |
|
GSE68628 |
| Janssen, Leen et al. (2017) Aging, microglia and cytoskeletal regulation are key factors in the pathological evolution of the APP23 mouse model for Alzheimer's disease.; Biochim Biophys Acta, 1863: 395-405 |
|
GSE80465 |
| Janssen, Sarah F et al. (2012) Gene expression and functional annotation of the human ciliary body epithelia.; PLoS One, 7: e44973 |
|
GSE37957 |
| Janssen, Sarah F et al. (2013) Gene expression and functional annotation of the human and mouse choroid plexus epithelium.; PLoS One, 8: e83345 |
|
GSE49969 |
| Jansson, Deidre et al. (2026) Central nervous system pericytes express soluble ST2 in inflammation and injury.; Mol Brain, 19: [no pages] |
|
GSE189712 |
| Jansz, Natasha et al. (2018) Smchd1 regulates long-range chromatin interactions on the inactive X chromosome and at Hox clusters.; Nat Struct Mol Biol, 25: 766-777 |
|
GSE111726 |
| Janus, Patryk et al. (2018) Pro-inflammatory cytokine and high doses of ionizing radiation have similar effects on the expression of NF-kappaB-dependent genes.; Cell Signal, 46: 23-31 |
|
GSE110386 |
| Janz, Philipp et al. (2023) Selective oxytocin receptor activation prevents prefrontal circuit dysfunction and social behavioral alterations in response to chronic prefrontal cortex activation in male rats.; Front Cell Neurosci, 17: 1286552 |
|
GSE246666 |
| Jara, Maximilian et al. (2025) Modulation of metabolic, inflammatory and fibrotic pathways by semaglutide in metabolic dysfunction-associated steatohepatitis.; Nat Med, [no vol.]: [no pages] |
|
GSE294629 GSE294630 |
| Jaric, Ivana et al. (2019) Chromatin organization in the female mouse brain fluctuates across the oestrous cycle.; Nat Commun, 10: 2851 |
|
GSE114036 |
| Jarick, Katja J et al. (2022) Non-redundant functions of group 2 innate lymphoid cells.; Nature, 611: 794-800 |
|
GSE212011 |
| Jariyasakulroj, Supawadee et al. (2023) Ribosome biogenesis controls cranial suture MSC fate via the complement pathway in mouse and human iPSC models.; Stem Cell Reports, 18: 2370-2385 |
|
GSE223614 |
| Jarjour, Nicholas N et al. (2019) Bhlhe40 mediates tissue-specific control of macrophage proliferation in homeostasis and type 2 immunity.; Nat Immunol, 20: 687-700 |
|
GSE125727 |
| Jaroslawska, Julia et al. (2015) Npvf: Hypothalamic Biomarker of Ambient Temperature Independent of Nutritional Status.; PLoS Genet, 11: e1005287 |
|
GSE59517 |
| Jarret, Abigail et al. (2020) Enteric Nervous System-Derived IL-18 Orchestrates Mucosal Barrier Immunity.; Cell, 180: 50-63.e12 |
|
GSE141808 |
| Jarvis, Jordan E et al. (2024) POU4F3 Is Necessary for Normal Merkel Cell Formation, whereas POU4F1 Is Dispensable.; J Invest Dermatol, 145: 193-196.e5 |
|
GSE264433 |
| Jaslow, Sarah L et al. (2018) Salmonella Activation of STAT3 Signaling by SarA Effector Promotes Intracellular Replication and Production of IL-10.; Cell Rep, 23: 3525-3536 |
|
GSE104354 |
| Jasso, Guadalupe J et al. (2022) Colon stroma mediates an inflammation-driven fibroblastic response controlling matrix remodeling and healing.; PLoS Biol, 20: e3001532 |
|
GSE172261.1 GSE172261.2 |
| Jaszczyk, Aneta et al. (2023) Overnight Corticosterone and Gene Expression in Mouse Hippocampus: Time Course during Resting Period.; Int J Mol Sci, 24: [no pages] |
|
GSE218508 |
| Jati, Suborno et al. (2025) Chromogranin A deficiency attenuates tauopathy by altering epinephrine-alpha-adrenergic receptor signaling in PS19 mice.; Nat Commun, 16: 4703 |
|
GSE274459 |