List of all 21,933 published papers with data in Gemma:
To search for a paper or experiment and see more details, visit the annotated paper search page.
| Kolesnikova, Varvara et al. (2023) GQIcombi application to subdue glioma via differentiation therapy.; Front Oncol, 14: 1322795 |
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GSE250617 |
| Kolesova, Hana et al. (2024) Reprogramming of the developing heart by Hif1a-deficient sympathetic system and maternal diabetes exposure.; Front Endocrinol (Lausanne), 15: 1344074 |
|
GSE250606 |
| Kolle, Gabriel et al. (2009) Identification of human embryonic stem cell surface markers by combined membrane-polysome translation state array analysis and immunotranscriptional profiling.; Stem Cells, 27: 2446-56 |
|
GSE13877 |
| Koller, Emily J et al. (2025) Antagonizing Il10 and Il4 signaling via intracerebral decoy receptor expression attenuates Aβ accumulation.; Acta Neuropathol Commun, 13: 51 |
|
GSE309404 |
| Kolli, Udhghatri et al. (2023) Multi-omics analysis revealing the interplay between gut microbiome and the host following opioid use.; Gut Microbes, 15: 2246184 |
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GSE230095 GSE230093 |
| Kollmann, Karoline et al. (2011) c-JUN promotes BCR-ABL-induced lymphoid leukemia by inhibiting methylation of the 5' region of Cdk6.; Blood, 117: 4065-75 |
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GSE27028 |
| Kollmann, Sebastian et al. (2019) Twins with different personalities: STAT5B-but not STAT5A-has a key role in BCR/ABL-induced leukemia.; Leukemia, 33: 1583-1597 |
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GSE121246 |
| Kollstrøm, Anna M et al. (2025) Dysregulation of synaptic transcripts underlies network abnormalities in ALS patient-derived motor neurons.; Am J Physiol Cell Physiol, 328: C1029-C1044 |
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GSE268090 |
| Kolson, Douglas R et al. (2016) Temporal patterns of gene expression during calyx of held development.; Dev Neurobiol, 76: 166-89 |
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GSE119685 |
| Kolter, Julia et al. (2025) Sensory neurons shape local macrophage identity via TGF-β signaling.; Immunity, 58: 2556-2573.e8 |
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GSE250456 |
| Komaniecki, Garrison et al. (2023) Astrocyte Elevated Gene-1 Cys75S-Palmitoylation by ZDHHC6 Regulates Its Biological Activity.; Biochemistry, 62: 543-553 |
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GSE215113 |
| Komatsu, David E et al. (2022) Acute postoperative pain and dorsal root ganglia transcriptomic signatures following total knee arthroplasty (TKA) in rats: An experimental study.; PLoS One, 17: e0278632 |
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GSE195833 |
| Komatsu, Masato et al. (2013) Molecular features of triple negative breast cancer cells by genome-wide gene expression profiling analysis.; Int J Oncol, 42: 478-506 |
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GSE38959 |
| Komatsu, Yosuke et al. (2021) 1H NMR metabolomic and transcriptomic analyses reveal urinary metabolites as biomarker candidates in response to protein undernutrition in adult rats.; Br J Nutr, 125: 633-643 |
|
GSE144207 |
| Komori, Rie et al. (2022) Regulation of Inflammation-Related Genes throughFosl1Suppression in a Levetiracetam-Treated Pilocarpine-Induced Status Epilepticus Mouse Model.; Int J Mol Sci, 23: [no pages] |
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GSE205373 |
| Komurov, Kakajan et al. (2012) The glucose-deprivation network counteracts lapatinib-induced toxicity in resistant ErbB2-positive breast cancer cells.; Mol Syst Biol, 8: 596 |
|
GSE38376 |
| Konala, Vijay Bhaskar Reddy et al. (2021) Neuronal and cardiac toxicity of pharmacological compounds identified through transcriptomic analysis of human pluripotent stem cell-derived embryoid bodies.; Toxicol Appl Pharmacol, 433: 115792 |
|
GSE195617 |
| Kondiles, Bethany R et al. (2021) Transcriptome of rat subcortical white matter and spinal cord after spinal injury and cortical stimulation.; Sci Data, 8: 175 |
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GSE155610 |
| Kondo, M A et al. (2013) Unique pharmacological actions of atypical neuroleptic quetiapine: possible role in cell cycle/fate control.; Transl Psychiatry, 3: e243 |
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GSE45229 |
| Kondo, Takashi et al. (2025) SKP1A bound to Polycomb-silenced genes mediates degradation of PRC2 and preconditions their activation.; Mol Cell, 85: 3306-3320.e6 |
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GSE263261 |
| Kondo, Takayuki et al. (2013) Modeling Alzheimer's disease with iPSCs reveals stress phenotypes associated with intracellular A? and differential drug responsiveness.; Cell Stem Cell, [no vol.]: [no pages] |
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GSE43382 GSE43326 |
| Kondoh, Shino et al. (2014) Estrogen receptor ? in osteocytes regulates trabecular bone formation in female mice.; Bone, 60: 68-77 |
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GSE41997 |
| Konecny, Gottfried E et al. (2011) Expression of p16 and retinoblastoma determines response to CDK4/6 inhibition in ovarian cancer.; Clin Cancer Res, 17: 1591-602 |
|
GSE26805 |
| Kong, Bo et al. (2016) A subset of metastatic pancreatic ductal adenocarcinomas depends quantitatively on oncogenic Kras/Mek/Erk-induced hyperactive mTOR signalling.; Gut, 65: 647-57 |
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GSE48643 |
| Kong, Hyewon et al. (2020) Metabolic determinants of cellular fitness dependent on mitochondrial reactive oxygen species.; Sci Adv, 6: [no pages] |
|
GSE157912 |
| Kong, Say Li et al. (2011) Cellular reprogramming by the conjoint action of ER?, FOXA1, and GATA3 to a ligand-inducible growth state.; Mol Syst Biol, 7: 526 |
|
GSE30574 |
| Kong, Sek Won et al. (2010) Heart failure-associated changes in RNA splicing of sarcomere genes.; Circ Cardiovasc Genet, 3: 138-46 |
|
GSE16499 |
| Kong, Sek Won et al. (2012) Characteristics and predictive value of blood transcriptome signature in males with autism spectrum disorders.; PLoS One, 7: e49475 |
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GSE18123.2 GSE18123.1 |
| Kong, Sek Won et al. (2014) Divergent dysregulation of gene expression in murine models of fragile X syndrome and tuberous sclerosis.; Mol Autism, 5: 16 |
|
GSE40630 |
| Kong, Sun-Young et al. (2016) The ELK3-GATA3 axis orchestrates invasion and metastasis of breast cancer cells in vitro and in vivo.; Oncotarget, 7: 65137-65146 |
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GSE83325 |
| Kong, Tim et al. (2025) RSK1 is an exploitable dependency in myeloproliferative neoplasms and secondary acute myeloid leukemia.; Nat Commun, 16: 492 |
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GSE283711 GSE283710 |
| Kong, Weili et al. (2022) Neuropilin-1 Mediates SARS-CoV-2 Infection of Astrocytes in Brain Organoids, Inducing Inflammation Leading to Dysfunction and Death of Neurons.; mBio, 13: e0230822 |
|
GSE198722 |
| Kong, Xi et al. (2023) Epigenetic regulation of SARS-Cov-2 spike protein modulates cellular viability and nascent RNA transcription in neuronal cells.; Genes Dis, [no vol.]: [no pages] |
|
GSE220046 |
| Kong, Xiangjun et al. (2017) Cancer drug addiction is relayed by an ERK2-dependent phenotype switch.; Nature, 550: 270-274 |
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GSE98867 |
| Kong, Yaru et al. (2022) SymMap database and TMNP algorithm reveal Huanggui Tongqiao granules for Allergic rhinitis through IFN-mediated neuroimmuno-modulation.; Pharmacol Res, 185: 106483 |
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GSE212198 |
| Kong, Yifan et al. (2022) The kinase PLK1 promotes the development ofKras/Tp53-mutant lung adenocarcinoma through transcriptional activation of the receptor RET.; Sci Signal, 15: eabj4009 |
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GSE206644 |
| Konishi, Hiroyuki et al. (2020) Astrocytic phagocytosis is a compensatory mechanism for microglial dysfunction.; EMBO J, [no vol.]: e104464 |
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GSE142022 |
| Konishi, Kazuhisa et al. (2009) Gene expression profiles of acute exacerbations of idiopathic pulmonary fibrosis.; Am J Respir Crit Care Med, 180: 167-75 |
|
GSE10667 |
| Konno, Daijiro et al. (2019) Dmrt factors determine the positional information of cerebral cortical progenitors via differential suppression of homeobox genes.; Development, 146: [no pages] |
|
GSE83639 |
| Konopka, G et al. (2012) Modeling the functional genomics of autism using human neurons.; Mol Psychiatry, [no vol.]: [no pages] |
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GSE28046 |
| Konopka, Genevieve et al. (2009) Human-specific transcriptional regulation of CNS development genes by FOXP2.; Nature, 462: 213-7 |
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GSE18142.1 GSE18142.2 |
| Konttinen, Henna et al. (2019) PSEN1?E9, APPswe, and APOE4 Confer Disparate Phenotypes in Human iPSC-Derived Microglia.; Stem Cell Reports, 13: 669-683 |
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GSE135707 |
| Konuma, Takaaki et al. (2011) Forced expression of the histone demethylase Fbxl10 maintains self-renewing hematopoietic stem cells.; Exp Hematol, 39: 697-709.e5 |
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GSE27787 |
| Koo, Mi-Sun et al. (2011) Phosphodiesterase 4 inhibition reduces innate immunity and improves isoniazid clearance of Mycobacterium tuberculosis in the lungs of infected mice.; PLoS One, 6: e17091 |
|
GSE25313 |
| Kooistra, Megan K et al. (2012) Strain-specific modifier genes of Cecr2-associated exencephaly in mice: genetic analysis and identification of differentially expressed candidate genes.; Physiol Genomics, 44: 35-46 |
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GSE30957 |
| Kool, Marcel et al. (2008) Integrated genomics identifies five medulloblastoma subtypes with distinct genetic profiles, pathway signatures and clinicopathological features.; PLoS One, 3: e3088 |
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GSE10327 |
| Koontz, Thad et al. (2008) Altered development of the brain after focal herpesvirus infection of the central nervous system.; J Exp Med, 205: 423-35 |
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GSE9945 |
| Koos, Björn et al. (2011) The transcription factor evi-1 is overexpressed, promotes proliferation, and is prognostically unfavorable in infratentorial ependymomas.; Clin Cancer Res, 17: 3631-7 |
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GSE25604 |
| Kopp, Florian et al. (2019) PUMILIO hyperactivity drives premature aging ofNorad-deficient mice.; Elife, 8: [no pages] |
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GSE121688 |
| Kopp, Nathan D et al. (2020) Functions of Gtf2i and Gtf2ird1 in the developing brain: transcription, DNA binding and long-term behavioral consequences.; Hum Mol Genet, 29: 1498-1519 |
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GSE138234 |
| Kopp, Nathan et al. (2019) Gtf2i and Gtf2ird1 mutation do not account for the full phenotypic effect of the Williams syndrome critical region in mouse models.; Hum Mol Genet, 28: 3443-3465 |
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GSE127723 |
| Kopparam, Jawahar et al. (2017) RIP4 inhibits STAT3 signaling to sustain lung adenocarcinoma differentiation.; Cell Death Differ, 24: 1761-1771 |
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GSE81154 |
| Koppenhafer, Stacia L et al. (2022) Inhibitor of DNA binding 2 (ID2) regulates the expression of developmental genes and tumorigenesis in ewing sarcoma.; Oncogene, 41: 2873-2884 |
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GSE183658 |
| Korada, Shreevidya et al. (2025) LINE-1 retrotransposition in a mouse TDP-43 model of neurodegeneration marks motor cortex neurons for cell-intrinsic and cell non-autonomous programmed cell death.; PLoS Genet, 21: e1012007 |
|
GSE300423 |
| Koranda, Jessica L et al. (2018) Mettl14 Is Essential for Epitranscriptomic Regulation of Striatal Function and Learning.; Neuron, 99: 283-292.e5 |
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GSE114675 |
| Korb, Erica et al. (2015) BET protein Brd4 activates transcription in neurons and BET inhibitor Jq1 blocks memory in mice.; Nat Neurosci, 18: 1464-73 |
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GSE63809 |
| Korb, Erica et al. (2017) Excess Translation of Epigenetic Regulators Contributes to Fragile X Syndrome and Is Alleviated by Brd4 Inhibition.; Cell, 170: 1209-1223.e20 |
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GSE81803 |
| Kordala, Anna J et al. (2023) PRMT inhibitor promotes SMN2 exon 7 inclusion and synergizes with nusinersen to rescue SMA mice.; EMBO Mol Med, [no vol.]: e17683 |
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GSE206400 |
| Korde, Larissa A et al. (2010) Gene expression pathway analysis to predict response to neoadjuvant docetaxel and capecitabine for breast cancer.; Breast Cancer Res Treat, 119: 685-99 |
|
GSE18728 |
| Koren, Shany et al. (2015) PIK3CA(H1047R) induces multipotency and multi-lineage mammary tumours.; Nature, 525: 114-8 |
|
GSE65411 |
| Koren, Shon A et al. (2019) Tau drives translational selectivity by interacting with ribosomal proteins.; Acta Neuropathol, 137: 571-583 |
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GSE121264 |
| Korff, Ane et al. (2023) A murine model of hnRNPH2-related neurodevelopmental disorder reveals a mechanism for genetic compensation by Hnrnph1.; J Clin Invest, 133: [no pages] |
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GSE226525 GSE226526 |
| Kori, Yekaterina et al. (2022) Multi-omic profiling of histone variant H3.3 lysine 27 methylation reveals a distinct role from canonical H3 in stem cell differentiation.; Mol Omics, 18: 296-314 |
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GSE169745 |
| Korin, Ben et al. (2023) The renal capsule, a vibrant and adaptive cell environment of the kidney in homeostasis and aging; bioRxiv, [no vol.]: [no pages] |
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GSE239530 |
| Korir, Paul K et al. (2014) A mutation in a splicing factor that causes retinitis pigmentosa has a transcriptome-wide effect on mRNA splicing.; BMC Res Notes, 7: 401 |
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GSE43134 |
| Koritzinsky, Marianne et al. (2013) Two phases of disulfide bond formation have differing requirements for oxygen.; J Cell Biol, 203: 615-27 |
|
GSE41666 |
| Korkola, James E et al. (2006) Down-regulation of stem cell genes, including those in a 200-kb gene cluster at 12p13.31, is associated with in vivo differentiation of human male germ cell tumors.; Cancer Res, 66: 820-7 |
|
GSE3218 |
| Korman, Benjamin D et al. (2014) Inflammatory expression profiles in monocyte-to-macrophage differentiation in patients with systemic lupus erythematosus and relationship with atherosclerosis.; Arthritis Res Ther, 16: R147 |
|
GSE37356 |
| Kornfeld, Samantha F et al. (2024) Loss of miR-145 promotes remyelination and functional recovery in a model of chronic central demyelination.; Commun Biol, 7: 813 |
|
GSE268808 |
| Korostynski, Michal et al. (2007) Morphine effects on striatal transcriptome in mice.; Genome Biol, 8: R128 |
|
GSE7762 |
| Korostynski, Michal et al. (2013) Novel drug-regulated transcriptional networks in brain reveal pharmacological properties of psychotropic drugs.; BMC Genomics, 14: 606 |
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GSE48951 GSE48954 |
| Korpal, Manav et al. (2013) An F876L mutation in androgen receptor confers genetic and phenotypic resistance to MDV3100 (enzalutamide).; Cancer Discov, 3: 1030-43 |
|
GSE44927 |
| Korshunov, Andrey et al. (2012) Biological and clinical heterogeneity of MYCN-amplified medulloblastoma.; Acta Neuropathol, 123: 515-27 |
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GSE30530 |
| Kosaka, Takeo et al. (2013) Identification of drug candidate against prostate cancer from the aspect of somatic cell reprogramming.; Cancer Sci, 104: 1017-26 |
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GSE36165 |
| Koseki, Hiroaki et al. (2017) Selective rab11 transport and the intrinsic regenerative ability of CNS axons.; Elife, 6: [no pages] |
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GSE92856 |
| Koshman, Yevgeniya E et al. (2015) Connective tissue growth factor regulates cardiac function and tissue remodeling in a mouse model of dilated cardiomyopathy.; J Mol Cell Cardiol, 89: 214-22 |
|
GSE68857 |
| Koshy, Aysis et al. (2023) Synergistic activation of RARβ and RARγ nuclear receptors restores cell specialization during stem cell differentiation by hijacking RARα-controlled programs.; Life Sci Alliance, 6: [no pages] |
|
GSE204816 |
| Koskimäki, Janne et al. (2019) Comprehensive transcriptome analysis of cerebral cavernous malformation across multiple species and genotypes.; JCI Insight, 4: [no pages] |
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GSE123968.2 GSE123968.3 |
| Koskimäki, Janne et al. (2019) Transcriptome clarifies mechanisms of lesion genesis versus progression in models of Ccm3 cerebral cavernous malformations.; Acta Neuropathol Commun, 7: 132 |
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GSE134005 |
| Koskuvi, Marja et al. (2022) Contribution of astrocytes to familial risk and clinical manifestation of schizophrenia.; Glia, 70: 650-660 |
|
GSE191248 |
| Kosno, Martyna et al. (2023) Molecular features driving condensate formation and gene expression by the BRD4-NUT fusion oncoprotein are overlapping but distinct.; Sci Rep, 13: 11907 |
|
GSE233302 |
| Koso, Hideto et al. (2012) Transposon mutagenesis identifies genes that transform neural stem cells into glioma-initiating cells.; Proc Natl Acad Sci U S A, 109: E2998-3007 |
|
GSE36897 |
| Koso, Hideto et al. (2016) Conditional rod photoreceptor ablation reveals Sall1 as a microglial marker and regulator of microglial morphology in the retina.; Glia, 64: 2005-24 |
|
GSE71365 |
| Kossler, Nadine et al. (2011) Neurofibromin (Nf1) is required for skeletal muscle development.; Hum Mol Genet, 20: 2697-709 |
|
GSE29343 |
| Kostopoulos, Nektarios et al. (2024) Local radiation enhances systemic CAR T-cell efficacy by augmenting antigen crosspresentation and T-cell infiltration.; Blood Adv, 8: 6308-6320 |
|
GSE281695 |
| Koth, Laura L et al. (2011) Sarcoidosis blood transcriptome reflects lung inflammation and overlaps with tuberculosis.; Am J Respir Crit Care Med, 184: 1153-63 |
|
GSE19314 |
| Koti, Madhuri et al. (2013) Identification of the IGF1/PI3K/NF ?B/ERK gene signalling networks associated with chemotherapy resistance and treatment response in high-grade serous epithelial ovarian cancer.; BMC Cancer, 13: 549 |
|
GSE51373 |
| Kotini, Andriana G et al. (2023) Patient-Derived iPSCs Faithfully Represent the Genetic Diversity and Cellular Architecture of Human Acute Myeloid Leukemia.; Blood Cancer Discov, 4: 318-335 |
|
GSE210889 |
| Körber, Christoph et al. (2014) Gene expression profile during functional maturation of a central mammalian synapse.; Eur J Neurosci, [no vol.]: [no pages] |
|
GSE49599 |
| Körber, Inken et al. (2016) Gene-Expression Profiling Suggests Impaired Signaling via the Interferon Pathway in Cstb-/- Microglia.; PLoS One, 11: e0158195 |
|
GSE64823 |
| Körholz, Katharina et al. (2021) Broad-Spectrum HDAC Inhibitors Promote Autophagy through FOXO Transcription Factors in Neuroblastoma.; Cells, 10: [no pages] |
|
GSE169219 |
| Körner, Marek B et al. (2022) Altered gene expression profiles impair the nervous system development in individuals with 15q13.3 microdeletion.; Sci Rep, 12: 13507 |
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GSE197903 |