Uses of Package
ubic.gemma.core.analysis.preprocess
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Classes in ubic.gemma.core.analysis.preprocess used by ubic.gemma.core.analysis.expression.coexpression.links Class Description SVDRelatedPreprocessingException Exception raised if a SVD cannot be computed. -
Classes in ubic.gemma.core.analysis.preprocess used by ubic.gemma.core.analysis.preprocess Class Description MeanVarianceService Responsible for returning the coordinates of the experiment's Mean-Variance relationship.OutlierDetails Container for details about a proposed outlierOutlierDetectionService PreprocessingException Allows us to catch preprocessing errors and handle them correctly.PreprocessorService Encapsulates steps that are done to expression data sets after they are loaded and experimental design curated.SplitExperimentService TODO Document MeTwoChannelMissingValues VectorMergingService -
Classes in ubic.gemma.core.analysis.preprocess used by ubic.gemma.core.analysis.preprocess.batcheffects Class Description PreprocessingException Allows us to catch preprocessing errors and handle them correctly. -
Classes in ubic.gemma.core.analysis.preprocess used by ubic.gemma.core.analysis.preprocess.filter Class Description PreprocessingException Allows us to catch preprocessing errors and handle them correctly. -
Classes in ubic.gemma.core.analysis.preprocess used by ubic.gemma.persistence.service.expression.experiment Class Description OutlierDetectionService -
Classes in ubic.gemma.core.analysis.preprocess used by ubic.gemma.rest.util.args Class Description OutlierDetectionService -
Classes in ubic.gemma.core.analysis.preprocess used by ubic.gemma.web.controller.expression.experiment Class Description PreprocessorService Encapsulates steps that are done to expression data sets after they are loaded and experimental design curated.