Package ubic.gemma.core.analysis.service

Interface ExpressionDataDeleterService

All Known Implementing Classes:

ExpressionDataDeleterServiceImpl

public interface ExpressionDataDeleterService

A high-level service for deleting data and their associated files.

Author:

poirigui

Method Summary

Modifier and Type	Method	Description
void	deleteProcessedData(ExpressionExperiment ee)
void	deleteRawData(ExpressionExperiment ee, QuantitationType qt)	Delete raw data vectors and associated data files.
void	deleteSingleCellData(ExpressionExperiment ee, QuantitationType qt)

Method Details

deleteSingleCellData

void deleteSingleCellData(ExpressionExperiment ee,
 QuantitationType qt)

See Also:

• SingleCellExpressionExperimentService.removeSingleCellDataVectors(ExpressionExperiment, QuantitationType)
• ExpressionDataFileService.deleteAllDataFiles(ExpressionExperiment, QuantitationType)

deleteRawData

void deleteRawData(ExpressionExperiment ee,
 QuantitationType qt)

Delete raw data vectors and associated data files.

This method will detect aggregated single-cell data vector and perform additional cleanups.

See Also:

• ExpressionExperimentService.removeRawDataVectors(ExpressionExperiment, QuantitationType)
• SingleCellExpressionExperimentAggregateService.removeAggregatedVectors(ExpressionExperiment, QuantitationType, boolean)
• ExpressionDataFileService.deleteAllDataFiles(ExpressionExperiment, QuantitationType)

deleteProcessedData

void deleteProcessedData(ExpressionExperiment ee)

See Also:

• ProcessedExpressionDataVectorService.removeProcessedDataVectors(ExpressionExperiment)
• ExpressionDataFileService.deleteAllProcessedDataFiles(ExpressionExperiment)