Uses of Class
ubic.gemma.core.analysis.singleCell.aggregate.SingleCellAggregationConfig.SingleCellAggregationConfigBuilder

Packages that use SingleCellAggregationConfig.SingleCellAggregationConfigBuilder

Package	Description
ubic.gemma.core.analysis.singleCell.aggregate	This package contains classes for subsetting and aggregating single-cell data.

Uses of SingleCellAggregationConfig.SingleCellAggregationConfigBuilder in ubic.gemma.core.analysis.singleCell.aggregate

Methods in ubic.gemma.core.analysis.singleCell.aggregate that return SingleCellAggregationConfig.SingleCellAggregationConfigBuilder

Modifier and Type	Method	Description
SingleCellAggregationConfig.SingleCellAggregationConfigBuilder	SingleCellAggregationConfig.SingleCellAggregationConfigBuilder.adjustLibrarySizes(boolean adjustLibrarySizes)	Perform adjustment of library sizes to better reflect the number of reads in the source sample.
static SingleCellAggregationConfig.SingleCellAggregationConfigBuilder	SingleCellAggregationConfig.builder()
SingleCellAggregationConfig.SingleCellAggregationConfigBuilder	SingleCellAggregationConfig.SingleCellAggregationConfigBuilder.includeMaskedCellsInLibrarySize(boolean includeMaskedCellsInLibrarySize)	Include masked cells in the library size calculation.
SingleCellAggregationConfig.SingleCellAggregationConfigBuilder	SingleCellAggregationConfig.SingleCellAggregationConfigBuilder.makePreferred(boolean makePreferred)	Make the resulting QT preferred.
SingleCellAggregationConfig.SingleCellAggregationConfigBuilder	SingleCellAggregationConfig.SingleCellAggregationConfigBuilder.mask(CellLevelCharacteristics mask)	Categorical mask to use on data.