Class ProbeSequenceParser

  • All Implemented Interfaces:
    LineParser<BioSequence>, Parser<BioSequence>

    public class ProbeSequenceParser
    extends BasicLineMapParser<String,​BioSequence>
    Parse probes from a tabular file. First columnn = probe id; Second column = sequence name; Third column = sequence. This is designed primarily to deal with oligonucleotide arrays that have sequence names different from the probe names.
    Author:
    paul