Package ubic.gemma.core.loader.util.mapper

Interface DesignElementMapper

All Superinterfaces:

EntityMapper<CompositeSequence>

All Known Implementing Classes:

AbstractGeneIdentifierBasedDesignElementMapper, EnsemblIdDesignElementMapper, GeneNameDesignElementMapper, MapBasedDesignElementMapper, NcbiIdDesignElementMapper, OfficialSymbolDesignElementMapper, SimpleDesignElementMapper

public interface DesignElementMapper
extends EntityMapper<CompositeSequence>

Maps gene identifiers to CompositeSequence.

Author:

poirigui

Nested Class Summary

Nested classes/interfaces inherited from interface ubic.gemma.core.loader.util.mapper.EntityMapper

EntityMapper.MappingStatistics, EntityMapper.StatefulEntityMapper<T extends Identifiable>

Method Summary

Modifier and Type	Method	Description
default EntityMapper.StatefulEntityMapper<CompositeSequence>	forCandidates(ArrayDesign platform)	Create a mapper for the design elements of a given platform.

Methods inherited from interface ubic.gemma.core.loader.util.mapper.EntityMapper

contains, containsAny, forCandidates, getMappingStatistics, getName, matchAll, matchAll, matchOne, matchOne

Method Details

forCandidates

default EntityMapper.StatefulEntityMapper<CompositeSequence> forCandidates(ArrayDesign platform)

Create a mapper for the design elements of a given platform.