Uses of Package ubic.gemma.core.loader.util.mapper (Gemma 1.32.0 API)

Packages that use ubic.gemma.core.loader.util.mapper
Package	Description
ubic.gemma.core.loader.expression	This package contains interfaces and classes for loading expression data.
ubic.gemma.core.loader.expression.geo.singleCell	This package contains specific logic for dealing with single-cell data from GEO.
ubic.gemma.core.loader.expression.sequencing	This package contains interfaces and classes for loading sequencing data.
ubic.gemma.core.loader.expression.singleCell	This package contains classes for loading single cell expression data.
ubic.gemma.core.loader.expression.singleCell.metadata	This package contains classes for loading single-cell metadata such as cell type assignment and cell-level characteristics.
ubic.gemma.core.loader.util.mapper	Utilities for mapping `Identifiable` entities to external identifiers.

Classes in ubic.gemma.core.loader.util.mapper used by ubic.gemma.core.loader.expression
Class	Description
BioAssayMapper	Strategy used for comparing `BioAssay` to sample names from the data.
DesignElementMapper	Maps gene identifiers to `CompositeSequence`.

Classes in ubic.gemma.core.loader.util.mapper used by ubic.gemma.core.loader.expression.geo.singleCell
Class	Description
AbstractBioAssayMapper
BioAssayMapper	Strategy used for comparing `BioAssay` to sample names from the data.
EntityMapper	Map external identifiers to Gemma entities.
HintingEntityMapper	Interface for mappers that can provide hints of identifier candidates.

Classes in ubic.gemma.core.loader.util.mapper used by ubic.gemma.core.loader.expression.sequencing
Class	Description
BioAssayMapper	Strategy used for comparing `BioAssay` to sample names from the data.

Classes in ubic.gemma.core.loader.util.mapper used by ubic.gemma.core.loader.expression.singleCell
Class	Description
BioAssayMapper	Strategy used for comparing `BioAssay` to sample names from the data.
DesignElementMapper	Maps gene identifiers to `CompositeSequence`.

Classes in ubic.gemma.core.loader.util.mapper used by ubic.gemma.core.loader.expression.singleCell.metadata
Class	Description
BioAssayMapper	Strategy used for comparing `BioAssay` to sample names from the data.

Classes in ubic.gemma.core.loader.util.mapper used by ubic.gemma.core.loader.util.mapper
Class	Description
AbstractBioAssayMapper
AbstractGeneIdentifierBasedDesignElementMapper	Base class for design element mapper that use gene identifiers.
BioAssayMapper	Strategy used for comparing `BioAssay` to sample names from the data.
DesignElementMapper	Maps gene identifiers to `CompositeSequence`.
EntityMapper	Map external identifiers to Gemma entities.
EntityMapper.MappingStatistics	Mapping statistics computed from a given set of entities and identifiers.
EntityMapper.StatefulEntityMapper	A stateful entity mapper keeps an internal state for a set of candidates to optimize the mapping process.
HintingEntityMapper	Interface for mappers that can provide hints of identifier candidates.
MapBasedDesignElementMapper
MapBasedEntityMapper	A simple implementation of `EntityMapper` that uses a `Map` to store association between identifiers and entities.