Package ubic.gemma.core.search.source

Class HibernateSearchSource

java.lang.Object

ubic.gemma.core.search.source.HibernateSearchSource

All Implemented Interfaces:

org.springframework.beans.factory.InitializingBean, FieldAwareSearchSource, SearchSource

@Component
public class HibernateSearchSource
extends Object
implements FieldAwareSearchSource, org.springframework.beans.factory.InitializingBean

Search source based on Hibernate Search.

Author:

poirigui

Constructor Summary

Constructors

Constructor	Description
HibernateSearchSource()

Method Summary

Modifier and Type	Method	Description
boolean	accepts(SearchSettings settings)	Indicate if this source accepts the given search settings.
void	afterPropertiesSet()
Set<String>	getFields(Class<? extends Identifiable> entityClass)	Obtain a list of fields that can be searched on.
static Map<String,String>	highlightDocument(LuceneHighlighter highlighter, org.apache.lucene.document.Document document, org.apache.lucene.search.highlight.Highlighter luceneHighlighter, org.apache.lucene.analysis.Analyzer analyzer)
Collection<SearchResult<ArrayDesign>>	searchArrayDesign(SearchSettings settings, SearchContext context)
Collection<SearchResult<BibliographicReference>>	searchBibliographicReference(SearchSettings settings, SearchContext context)
Collection<SearchResult<BioSequence>>	searchBioSequence(SearchSettings settings, SearchContext context)
Collection<SearchResult<CompositeSequence>>	searchCompositeSequence(SearchSettings settings, SearchContext context)
Collection<SearchResult<ExpressionExperimentSet>>	searchExperimentSet(SearchSettings settings, SearchContext context)
Collection<SearchResult<ExpressionExperiment>>	searchExpressionExperiment(SearchSettings settings, SearchContext context)
Collection<SearchResult<Gene>>	searchGene(SearchSettings settings, SearchContext context)
Collection<SearchResult<GeneSet>>	searchGeneSet(SearchSettings settings, SearchContext context)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface ubic.gemma.core.search.SearchSource

searchBioSequenceAndGene, searchBlacklistedEntities, searchCompositeSequenceAndGene

Constructor Details

HibernateSearchSource

public HibernateSearchSource()

Method Details

afterPropertiesSet

public void afterPropertiesSet()
                        throws Exception

Specified by:

afterPropertiesSet in interface org.springframework.beans.factory.InitializingBean

Throws:

Exception

getFields

public Set<String> getFields(Class<? extends Identifiable> entityClass)

Description copied from interface: FieldAwareSearchSource

Obtain a list of fields that can be searched on.

Specified by:

getFields in interface FieldAwareSearchSource

accepts

public boolean accepts(SearchSettings settings)

Description copied from interface: SearchSource

Indicate if this source accepts the given search settings.

Specified by:

accepts in interface SearchSource

searchArrayDesign

public Collection<SearchResult<ArrayDesign>> searchArrayDesign(SearchSettings settings,
 SearchContext context)
                                                        throws SearchException

Specified by:

searchArrayDesign in interface SearchSource

Throws:

SearchException

searchBibliographicReference

public Collection<SearchResult<BibliographicReference>> searchBibliographicReference(SearchSettings settings,
 SearchContext context)
                                                                              throws SearchException

Specified by:

searchBibliographicReference in interface SearchSource

Throws:

SearchException

searchExperimentSet

public Collection<SearchResult<ExpressionExperimentSet>> searchExperimentSet(SearchSettings settings,
 SearchContext context)
                                                                      throws SearchException

Specified by:

searchExperimentSet in interface SearchSource

Throws:

SearchException

searchBioSequence

public Collection<SearchResult<BioSequence>> searchBioSequence(SearchSettings settings,
 SearchContext context)
                                                        throws SearchException

Specified by:

searchBioSequence in interface SearchSource

Throws:

SearchException

searchCompositeSequence

public Collection<SearchResult<CompositeSequence>> searchCompositeSequence(SearchSettings settings,
 SearchContext context)
                                                                    throws SearchException

Specified by:

searchCompositeSequence in interface SearchSource

Throws:

SearchException

searchExpressionExperiment

public Collection<SearchResult<ExpressionExperiment>> searchExpressionExperiment(SearchSettings settings,
 SearchContext context)
                                                                          throws SearchException

Specified by:

searchExpressionExperiment in interface SearchSource

Throws:

SearchException

searchGene

public Collection<SearchResult<Gene>> searchGene(SearchSettings settings,
 SearchContext context)
                                          throws SearchException

Specified by:

searchGene in interface SearchSource

Throws:

SearchException

searchGeneSet

public Collection<SearchResult<GeneSet>> searchGeneSet(SearchSettings settings,
 SearchContext context)
                                                throws SearchException

Specified by:

searchGeneSet in interface SearchSource

Throws:

SearchException

highlightDocument

@Nullable
public static Map<String,String> highlightDocument(LuceneHighlighter highlighter,
 org.apache.lucene.document.Document document,
 org.apache.lucene.search.highlight.Highlighter luceneHighlighter,
 org.apache.lucene.analysis.Analyzer analyzer)