Package ubic.gemma.core.tasks.visualization

Class DifferentialExpressionGenesConditionsValueObject.Condition

java.lang.Object

ubic.gemma.core.tasks.visualization.DifferentialExpressionGenesConditionsValueObject.Condition

Enclosing class:

DifferentialExpressionGenesConditionsValueObject

public class DifferentialExpressionGenesConditionsValueObject.Condition
extends Object

Represents one column in the differential expression view; one contrast in a resultset in an experiment.

Constructor Summary

Constructors

Constructor	Description
Condition(Long resultSetId, Long factorValueId)
Condition(ExpressionExperimentValueObject experiment, DifferentialExpressionAnalysisValueObject analysis, DiffExResultSetSummaryValueObject resultSet, FactorValueValueObject factorValue)

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object obj)
long	getAnalysisId()
String	getAnalysisType()
String	getBaselineFactorValue()
Long	getBaselineFactorValueId()
String	getContrastFactorValue()
Long	getDatasetId()
String	getDatasetName()
String	getDatasetShortName()
String	getExperimentGroupName()
String	getExperimentId()
String	getExperimentName()
String	getFactorCategory()
String	getFactorDescription()
Long	getFactorId()
String	getFactorName()
Long	getFactorValueId()
String	getId()
boolean	getIsSelected()
Boolean	getIsSubset()
Integer	getNumberDiffExpressedProbes()
Integer	getNumberDiffExpressedProbesDown()
Integer	getNumberDiffExpressedProbesUp()
Integer	getNumberOfGenesDiffExpressed()
Integer	getNumberOfGenesTested()
Integer	getNumberOfProbesOnArray()
long	getResultSetId()
int	hashCode()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Condition

public Condition(ExpressionExperimentValueObject experiment,
                 DifferentialExpressionAnalysisValueObject analysis,
                 DiffExResultSetSummaryValueObject resultSet,
                 FactorValueValueObject factorValue)

Condition

public Condition(Long resultSetId,
                 Long factorValueId)

Method Detail

getAnalysisId

public long getAnalysisId()

getAnalysisType

public String getAnalysisType()

getBaselineFactorValue

public String getBaselineFactorValue()

getBaselineFactorValueId

public Long getBaselineFactorValueId()

getContrastFactorValue

public String getContrastFactorValue()

getDatasetId

public Long getDatasetId()

getDatasetName

public String getDatasetName()

getDatasetShortName

public String getDatasetShortName()

getExperimentGroupName

public String getExperimentGroupName()

getExperimentId

public String getExperimentId()

getExperimentName

public String getExperimentName()

getFactorCategory

public String getFactorCategory()

getFactorDescription

public String getFactorDescription()

getFactorId

public Long getFactorId()

getFactorName

public String getFactorName()

getFactorValueId

public Long getFactorValueId()

getId

public String getId()

getIsSelected

public boolean getIsSelected()

getIsSubset

public Boolean getIsSubset()

getNumberDiffExpressedProbes

public Integer getNumberDiffExpressedProbes()

getNumberOfGenesDiffExpressed

public Integer getNumberOfGenesDiffExpressed()

getNumberDiffExpressedProbesDown

public Integer getNumberDiffExpressedProbesDown()

getNumberDiffExpressedProbesUp

public Integer getNumberDiffExpressedProbesUp()

getNumberOfGenesTested

public Integer getNumberOfGenesTested()

getNumberOfProbesOnArray

public Integer getNumberOfProbesOnArray()

getResultSetId

public long getResultSetId()

hashCode

public int hashCode()

Overrides:

hashCode in class Object

equals

public boolean equals(Object obj)

Overrides:

equals in class Object