Package ubic.gemma.model.expression.experiment

Class FactorValueValueObject

java.lang.Object

ubic.gemma.model.common.IdentifiableValueObject<FactorValue>

ubic.gemma.model.expression.experiment.AbstractFactorValueValueObject

ubic.gemma.model.expression.experiment.FactorValueValueObject

All Implemented Interfaces:

Serializable, Identifiable

@Deprecated
public class FactorValueValueObject
extends AbstractFactorValueValueObject

Deprecated.

aim towards using the FactorValueBasicValueObject. This one is confusing. Once usage of this type has been completely phased out, revise the BioMaterialValueObject and relevant DAOs and Services.

Each FactorValue can be associated with multiple characteristics (or with a measurement). However, for flattening out the objects for client display, there is only one characteristic associated here.

Note: this used to be called FactorValueObject and now replaces the old FactorValueValueObject. Confusing!

Author:

Paul

See Also:

Serialized Form

Field Summary

Fields inherited from class ubic.gemma.model.common.IdentifiableValueObject

id

Constructor Summary

Constructors

Constructor	Description
FactorValueValueObject()	Deprecated. Required when using the class as a spring bean.
FactorValueValueObject(Long id)	Deprecated.
FactorValueValueObject(FactorValue value)	Deprecated.
FactorValueValueObject(FactorValue value, boolean includeExperimentalFactor)	Deprecated. Create a FactorValue VO.
FactorValueValueObject(FactorValue fv, Statement c)	Deprecated. Create a FactorValue VO focusing on a specific statement.

Method Summary

Modifier and Type	Method	Description
String	getDescription()	Deprecated.
String	getFactorValue()	Deprecated.
String	toString()	Deprecated.

Methods inherited from class ubic.gemma.model.expression.experiment.AbstractFactorValueValueObject

isMeasurement

Methods inherited from class ubic.gemma.model.common.IdentifiableValueObject

getId, setId

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

FactorValueValueObject

public FactorValueValueObject()

Deprecated.

Required when using the class as a spring bean.

FactorValueValueObject

public FactorValueValueObject(Long id)

Deprecated.

FactorValueValueObject

public FactorValueValueObject(FactorValue value)

Deprecated.

FactorValueValueObject

public FactorValueValueObject(FactorValue value,
                              boolean includeExperimentalFactor)

Deprecated.

Create a FactorValue VO.

Parameters:

includeExperimentalFactor - whether to include the experimental factor in the serialization, this might be unnecessary if the FV is rendered in the context of its factor

FactorValueValueObject

public FactorValueValueObject(FactorValue fv,
                              Statement c)

Deprecated.

Create a FactorValue VO focusing on a specific statement.

Parameters:

fv - a factor value

c - specific statement we're focusing on (yes, this is confusing). This is necessary if the factor value has multiple characteristics. DO NOT pass in the experimental factor category, this just confuses things. If c is null, the plain "value" is used.

Method Detail

getDescription

@Deprecated
public String getDescription()

Deprecated.

getFactorValue

@Deprecated
public String getFactorValue()

Deprecated.

toString

public String toString()

Deprecated.

Overrides:

toString in class IdentifiableValueObject<FactorValue>